RNA–Protein interactions for RNA: ENST00000590498.5

TUBD1-210, Transcript of tubulin delta 1, humanhuman

TSL 4

Gene TUBD1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-210ENST00000590498 FGD6Q6ZV73 1430 aa16.7■□□□□ 0.26
TUBD1-210ENST00000590498 RGS17Q9UGC6 210 aaPredicted RBP16.69■□□□□ 0.26
TUBD1-210ENST00000590498 EID1Q9Y6B2 187 aa16.68■□□□□ 0.26
TUBD1-210ENST00000590498 LMTK2Q8IWU2 1503 aa16.68■□□□□ 0.26
TUBD1-210ENST00000590498 TET3O43151 1660 aa16.66■□□□□ 0.26
TUBD1-210ENST00000590498 RBM33Q96EV2 1170 aaKnown RBP16.66■□□□□ 0.26
TUBD1-210ENST00000590498 NOS1P29475 1434 aa16.65■□□□□ 0.26
TUBD1-210ENST00000590498 SLC26A8Q96RN1 970 aa16.65■□□□□ 0.26
TUBD1-210ENST00000590498 EFCAB6Q5THR3 1501 aa16.65■□□□□ 0.26
TUBD1-210ENST00000590498 KANK1Q14678 1352 aa16.64■□□□□ 0.26
TUBD1-210ENST00000590498 ANKRD30AQ9BXX3 1397 aa16.64■□□□□ 0.26
TUBD1-210ENST00000590498 ZNF219Q9P2Y4 722 aaPredicted RBP16.64■□□□□ 0.25
TUBD1-210ENST00000590498 TMEM94Q12767 1356 aa16.64■□□□□ 0.25
TUBD1-210ENST00000590498 KCNA6P17658 529 aa16.63■□□□□ 0.25
TUBD1-210ENST00000590498 STAG3Q9UJ98 1225 aa16.63■□□□□ 0.25
TUBD1-210ENST00000590498 FAM135BQ49AJ0 1406 aa16.62■□□□□ 0.25
TUBD1-210ENST00000590498 KDM5AP29375 1690 aaKnown RBP16.62■□□□□ 0.25
TUBD1-210ENST00000590498 PROSER2Q86WR7 435 aaPredicted RBP16.6■□□□□ 0.25
TUBD1-210ENST00000590498 ADGRL2O95490 1459 aa16.6■□□□□ 0.25
TUBD1-210ENST00000590498 ADGRB3O60242 1522 aa16.58■□□□□ 0.24
TUBD1-210ENST00000590498 SLC52A1Q9NWF4 448 aa16.57■□□□□ 0.24
TUBD1-210ENST00000590498 ZFYVE9O95405 1425 aa16.56■□□□□ 0.24
TUBD1-210ENST00000590498 ABCB7O75027 752 aa16.56■□□□□ 0.24
TUBD1-210ENST00000590498 POTEAQ6S8J7 498 aa16.55■□□□□ 0.24
TUBD1-210ENST00000590498 ROBO1Q9Y6N7 1651 aa16.55■□□□□ 0.24
TUBD1-210ENST00000590498 NWD1Q149M9 1564 aa16.55■□□□□ 0.24
TUBD1-210ENST00000590498 ANKRD50Q9ULJ7 1429 aa16.54■□□□□ 0.24
TUBD1-210ENST00000590498 FAM50AQ14320 339 aaKnown RBP16.54■□□□□ 0.24
TUBD1-210ENST00000590498 NKTRP30414 1462 aaKnown RBP16.52■□□□□ 0.23
TUBD1-210ENST00000590498 RPRD2Q5VT52 1461 aaKnown RBP16.52■□□□□ 0.23
TUBD1-210ENST00000590498 SLAIN2Q9P270 581 aa16.51■□□□□ 0.23
TUBD1-210ENST00000590498 TMEM131LA2VDJ0 1609 aa16.51■□□□□ 0.23
TUBD1-210ENST00000590498 RIMS2Q9UQ26 1411 aa16.51■□□□□ 0.23
TUBD1-210ENST00000590498 PLEKHG1Q9ULL1 1385 aa16.51■□□□□ 0.23
TUBD1-210ENST00000590498 BCANQ96GW7 911 aa16.5■□□□□ 0.23
TUBD1-210ENST00000590498 MYO5BQ9ULV0 1848 aa16.49■□□□□ 0.23
TUBD1-210ENST00000590498 NUTM2DQ5VT03 806 aaPredicted RBP16.48■□□□□ 0.23
TUBD1-210ENST00000590498 TBX22Q9Y458 520 aa16.48■□□□□ 0.23
TUBD1-210ENST00000590498 MSH6P52701 1360 aa16.48■□□□□ 0.23
TUBD1-210ENST00000590498 CHD2O14647 1828 aaKnown RBP16.47■□□□□ 0.23
TUBD1-210ENST00000590498 GCC2Q8IWJ2 1684 aa16.47■□□□□ 0.23
TUBD1-210ENST00000590498 ADAMTS13Q76LX8 1427 aa16.47■□□□□ 0.23
TUBD1-210ENST00000590498 SAMD1Q6SPF0 538 aaPredicted RBP16.47■□□□□ 0.23
TUBD1-210ENST00000590498 UNC13BO14795 1591 aa16.46■□□□□ 0.23
TUBD1-210ENST00000590498 E9PCH4 1651 aa16.44■□□□□ 0.22
TUBD1-210ENST00000590498 PPP1R15AO75807 674 aaPredicted RBP16.44■□□□□ 0.22
TUBD1-210ENST00000590498 CHGAP10645 457 aaKnown RBP16.44■□□□□ 0.22
TUBD1-210ENST00000590498 PHLPP1O60346 1717 aa16.42■□□□□ 0.22
TUBD1-210ENST00000590498 HDGFP51858 240 aaKnown RBP16.42■□□□□ 0.22
TUBD1-210ENST00000590498 COL16A1Q07092 1604 aaPredicted RBP16.41■□□□□ 0.22
TUBD1-210ENST00000590498 JCADQ9P266 1359 aa16.41■□□□□ 0.22
TUBD1-210ENST00000590498 PTPRUQ92729 1446 aa16.41■□□□□ 0.22
TUBD1-210ENST00000590498 NCOA3Q9Y6Q9 1424 aa16.41■□□□□ 0.22
TUBD1-210ENST00000590498 ROCK1Q13464 1354 aa16.4■□□□□ 0.22
TUBD1-210ENST00000590498 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.4■□□□□ 0.22
TUBD1-210ENST00000590498 LRP6O75581 1613 aa16.39■□□□□ 0.21
TUBD1-210ENST00000590498 IQGAP3Q86VI3 1631 aa16.38■□□□□ 0.21
TUBD1-210ENST00000590498 C19orf44Q9H6X5 657 aa16.38■□□□□ 0.21
TUBD1-210ENST00000590498 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.37■□□□□ 0.21
TUBD1-210ENST00000590498 AMOTL2Q9Y2J4 779 aa16.37■□□□□ 0.21
TUBD1-210ENST00000590498 NUP155O75694 1391 aa16.37■□□□□ 0.21
TUBD1-210ENST00000590498 PIK3R4Q99570 1358 aa16.37■□□□□ 0.21
TUBD1-210ENST00000590498 ITGAEP38570 1179 aa16.35■□□□□ 0.21
TUBD1-210ENST00000590498 C14orf37Q86TY3 774 aa16.35■□□□□ 0.21
TUBD1-210ENST00000590498 CADPS2Q86UW7 1296 aa16.35■□□□□ 0.21
TUBD1-210ENST00000590498 SETD1AO15047 1707 aaKnown RBP16.35■□□□□ 0.21
TUBD1-210ENST00000590498 DIP2AQ14689 1571 aa16.34■□□□□ 0.21
TUBD1-210ENST00000590498 BRINP3Q76B58 766 aa16.34■□□□□ 0.21
TUBD1-210ENST00000590498 PPARGC1BQ86YN6 1023 aaKnown RBP16.34■□□□□ 0.21
TUBD1-210ENST00000590498 AHDC1Q5TGY3 1603 aaPredicted RBP16.34■□□□□ 0.21
TUBD1-210ENST00000590498 ATF3P18847 181 aa16.33■□□□□ 0.2
TUBD1-210ENST00000590498 NRXN3Q9Y4C0 1643 aa16.33■□□□□ 0.2
TUBD1-210ENST00000590498 SPATA31A6Q5VVP1 1343 aa16.32■□□□□ 0.2
TUBD1-210ENST00000590498 TRPM2O94759 1503 aa16.31■□□□□ 0.2
TUBD1-210ENST00000590498 METP08581 1390 aa16.31■□□□□ 0.2
TUBD1-210ENST00000590498 XRN1Q8IZH2 1706 aaKnown RBP16.29■□□□□ 0.2
TUBD1-210ENST00000590498 SETBP1Q9Y6X0 1596 aa16.29■□□□□ 0.2
TUBD1-210ENST00000590498 SHPRHQ149N8 1683 aa16.28■□□□□ 0.2
TUBD1-210ENST00000590498 MST1RQ04912 1400 aa16.28■□□□□ 0.2
TUBD1-210ENST00000590498 RBM42Q9BTD8 480 aaKnown RBP16.27■□□□□ 0.2
TUBD1-210ENST00000590498 NUTM2BA6NNL0 878 aaPredicted RBP16.26■□□□□ 0.19
TUBD1-210ENST00000590498 NUTM2EB1AL46 878 aaPredicted RBP16.26■□□□□ 0.19
TUBD1-210ENST00000590498 MEX3CQ5U5Q3 659 aaKnown RBP16.26■□□□□ 0.19
TUBD1-210ENST00000590498 NUTM2AQ8IVF1 878 aaPredicted RBP16.26■□□□□ 0.19
TUBD1-210ENST00000590498 DDX17Q92841 729 aaKnown RBP16.26■□□□□ 0.19
TUBD1-210ENST00000590498 UPF1Q92900 1129 aaKnown RBP eCLIP16.26■□□□□ 0.19
TUBD1-210ENST00000590498 TRIM52Q96A61 297 aa16.26■□□□□ 0.19
TUBD1-210ENST00000590498 ASXL1Q8IXJ9 1541 aa16.25■□□□□ 0.19
TUBD1-210ENST00000590498 ZNF772Q68DY9 489 aaPredicted RBP16.25■□□□□ 0.19
TUBD1-210ENST00000590498 DCCP43146 1447 aa16.25■□□□□ 0.19
TUBD1-210ENST00000590498 ZNF326Q5BKZ1 582 aaKnown RBP16.24■□□□□ 0.19
TUBD1-210ENST00000590498 SETD5Q9C0A6 1442 aa16.24■□□□□ 0.19
TUBD1-210ENST00000590498 SPHKAPQ2M3C7 1700 aa16.24■□□□□ 0.19
TUBD1-210ENST00000590498 NEXMIFQ5QGS0 1516 aa16.23■□□□□ 0.19
TUBD1-210ENST00000590498 CLTCL1P53675 1640 aa16.23■□□□□ 0.19
TUBD1-210ENST00000590498 NHSL1Q5SYE7 1610 aa16.21■□□□□ 0.19
TUBD1-210ENST00000590498 AFF2P51816 1311 aa16.2■□□□□ 0.18
TUBD1-210ENST00000590498 RXRBP28702 533 aa16.2■□□□□ 0.18
TUBD1-210ENST00000590498 ADGRL3Q9HAR2 1447 aa16.19■□□□□ 0.18
TUBD1-210ENST00000590498 MYCNP04198 464 aaPredicted RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms