RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 KANK1Q14678 1352 aa20.25■□□□□ 0.83
PRKCSH-210ENST00000589990 MYO5BQ9ULV0 1848 aa20.25■□□□□ 0.83
PRKCSH-210ENST00000589990 CHIC2Q9UKJ5 165 aa20.24■□□□□ 0.83
PRKCSH-210ENST00000589990 CHD2O14647 1828 aaKnown RBP20.23■□□□□ 0.83
PRKCSH-210ENST00000589990 BCANQ96GW7 911 aa20.23■□□□□ 0.83
PRKCSH-210ENST00000589990 LOC105371045A0A1W2PR82 267 aa20.22■□□□□ 0.83
PRKCSH-210ENST00000589990 ZFYVE9O95405 1425 aa20.21■□□□□ 0.83
PRKCSH-210ENST00000589990 UPF1Q92900 1129 aaKnown RBP eCLIP20.21■□□□□ 0.83
PRKCSH-210ENST00000589990 TRIM52Q96A61 297 aa20.21■□□□□ 0.83
PRKCSH-210ENST00000589990 GCC2Q8IWJ2 1684 aa20.18■□□□□ 0.82
PRKCSH-210ENST00000589990 PLEKHG1Q9ULL1 1385 aa20.17■□□□□ 0.82
PRKCSH-210ENST00000589990 RIMS2Q9UQ26 1411 aa20.16■□□□□ 0.82
PRKCSH-210ENST00000589990 SLC52A1Q9NWF4 448 aa20.15■□□□□ 0.82
PRKCSH-210ENST00000589990 ANKRD30AQ9BXX3 1397 aa20.15■□□□□ 0.82
PRKCSH-210ENST00000589990 FGD6Q6ZV73 1430 aa20.15■□□□□ 0.82
PRKCSH-210ENST00000589990 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.15■□□□□ 0.82
PRKCSH-210ENST00000589990 TMEM131LA2VDJ0 1609 aa20.14■□□□□ 0.81
PRKCSH-210ENST00000589990 MEX3CQ5U5Q3 659 aaKnown RBP20.14■□□□□ 0.81
PRKCSH-210ENST00000589990 SHPRHQ149N8 1683 aa20.13■□□□□ 0.81
PRKCSH-210ENST00000589990 AHDC1Q5TGY3 1603 aaPredicted RBP20.13■□□□□ 0.81
PRKCSH-210ENST00000589990 SPATA31A6Q5VVP1 1343 aa20.13■□□□□ 0.81
PRKCSH-210ENST00000589990 NUTM2DQ5VT03 806 aaPredicted RBP20.13■□□□□ 0.81
PRKCSH-210ENST00000589990 ADAMTS13Q76LX8 1427 aa20.11■□□□□ 0.81
PRKCSH-210ENST00000589990 PPP1R15AO75807 674 aaPredicted RBP20.11■□□□□ 0.81
PRKCSH-210ENST00000589990 C14orf37Q86TY3 774 aa20.11■□□□□ 0.81
PRKCSH-210ENST00000589990 DIP2AQ14689 1571 aa20.11■□□□□ 0.81
PRKCSH-210ENST00000589990 ZNF772Q68DY9 489 aaPredicted RBP20.1■□□□□ 0.81
PRKCSH-210ENST00000589990 SRCAPQ6ZRS2 3230 aa20.1■□□□□ 0.81
PRKCSH-210ENST00000589990 TBX22Q9Y458 520 aa20.09■□□□□ 0.81
PRKCSH-210ENST00000589990 RPRD2Q5VT52 1461 aaKnown RBP20.08■□□□□ 0.81
PRKCSH-210ENST00000589990 NUTM2BA6NNL0 878 aaPredicted RBP20.08■□□□□ 0.81
PRKCSH-210ENST00000589990 NUTM2EB1AL46 878 aaPredicted RBP20.08■□□□□ 0.81
PRKCSH-210ENST00000589990 NUTM2AQ8IVF1 878 aaPredicted RBP20.08■□□□□ 0.81
PRKCSH-210ENST00000589990 ADGRL2O95490 1459 aa20.07■□□□□ 0.8
PRKCSH-210ENST00000589990 NCOA3Q9Y6Q9 1424 aa20.07■□□□□ 0.8
PRKCSH-210ENST00000589990 CHGAP10645 457 aaKnown RBP20.06■□□□□ 0.8
PRKCSH-210ENST00000589990 RXRBP28702 533 aa20.06■□□□□ 0.8
PRKCSH-210ENST00000589990 BRINP3Q76B58 766 aa20.06■□□□□ 0.8
PRKCSH-210ENST00000589990 PTPRUQ92729 1446 aa20.05■□□□□ 0.8
PRKCSH-210ENST00000589990 C19orf44Q9H6X5 657 aa20.05■□□□□ 0.8
PRKCSH-210ENST00000589990 ATF3P18847 181 aa20.04■□□□□ 0.8
PRKCSH-210ENST00000589990 CADPS2Q86UW7 1296 aa20.04■□□□□ 0.8
PRKCSH-210ENST00000589990 ANKRD50Q9ULJ7 1429 aa20.03■□□□□ 0.8
PRKCSH-210ENST00000589990 AFF2P51816 1311 aa20.02■□□□□ 0.8
PRKCSH-210ENST00000589990 E9PCH4 1651 aa20.02■□□□□ 0.8
PRKCSH-210ENST00000589990 CDK12Q9NYV4 1490 aaPredicted RBP20■□□□□ 0.79
PRKCSH-210ENST00000589990 AMOTL2Q9Y2J4 779 aa20■□□□□ 0.79
PRKCSH-210ENST00000589990 ASXL1Q8IXJ9 1541 aa20■□□□□ 0.79
PRKCSH-210ENST00000589990 HDGFP51858 240 aaKnown RBP19.99■□□□□ 0.79
PRKCSH-210ENST00000589990 DDX17Q92841 729 aaKnown RBP19.99■□□□□ 0.79
PRKCSH-210ENST00000589990 RGS12O14924 1447 aa19.99■□□□□ 0.79
PRKCSH-210ENST00000589990 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.98■□□□□ 0.79
PRKCSH-210ENST00000589990 UNC13BO14795 1591 aa19.98■□□□□ 0.79
PRKCSH-210ENST00000589990 NHSL1Q5SYE7 1610 aa19.98■□□□□ 0.79
PRKCSH-210ENST00000589990 TRPM2O94759 1503 aa19.97■□□□□ 0.79
PRKCSH-210ENST00000589990 PIK3R4Q99570 1358 aa19.97■□□□□ 0.79
PRKCSH-210ENST00000589990 FAM50AQ14320 339 aaKnown RBP19.97■□□□□ 0.79
PRKCSH-210ENST00000589990 MST1RQ04912 1400 aa19.96■□□□□ 0.79
PRKCSH-210ENST00000589990 NRXN3Q9Y4C0 1643 aa19.96■□□□□ 0.79
PRKCSH-210ENST00000589990 APLP2Q06481 763 aa19.96■□□□□ 0.79
PRKCSH-210ENST00000589990 XRN1Q8IZH2 1706 aaKnown RBP19.96■□□□□ 0.79
PRKCSH-210ENST00000589990 SETD5Q9C0A6 1442 aa19.95■□□□□ 0.78
PRKCSH-210ENST00000589990 C8orf37Q96NL8 207 aa19.94■□□□□ 0.78
PRKCSH-210ENST00000589990 QTRT2Q9H974 415 aaKnown RBP19.92■□□□□ 0.78
PRKCSH-210ENST00000589990 DCCP43146 1447 aa19.92■□□□□ 0.78
PRKCSH-210ENST00000589990 PNPLA6Q8IY17 1366 aa19.91■□□□□ 0.78
PRKCSH-210ENST00000589990 IQGAP3Q86VI3 1631 aa19.9■□□□□ 0.78
PRKCSH-210ENST00000589990 METP08581 1390 aa19.89■□□□□ 0.77
PRKCSH-210ENST00000589990 RBM6P78332 1123 aaKnown RBP19.88■□□□□ 0.77
PRKCSH-210ENST00000589990 NALCNQ8IZF0 1738 aa19.88■□□□□ 0.77
PRKCSH-210ENST00000589990 SETBP1Q9Y6X0 1596 aa19.87■□□□□ 0.77
PRKCSH-210ENST00000589990 LRRC59Q96AG4 307 aaKnown RBP19.87■□□□□ 0.77
PRKCSH-210ENST00000589990 ADAMTS2O95450 1211 aa19.86■□□□□ 0.77
PRKCSH-210ENST00000589990 ADGRL3Q9HAR2 1447 aa19.84■□□□□ 0.77
PRKCSH-210ENST00000589990 EP400Q96L91 3159 aa19.83■□□□□ 0.76
PRKCSH-210ENST00000589990 NGLY1Q96IV0 654 aa19.82■□□□□ 0.76
PRKCSH-210ENST00000589990 NUP155O75694 1391 aa19.82■□□□□ 0.76
PRKCSH-210ENST00000589990 C1orf167Q5SNV9 1468 aa19.79■□□□□ 0.76
PRKCSH-210ENST00000589990 SPHKAPQ2M3C7 1700 aa19.79■□□□□ 0.76
PRKCSH-210ENST00000589990 LAMC1P11047 1609 aa19.77■□□□□ 0.76
PRKCSH-210ENST00000589990 ZNF326Q5BKZ1 582 aaKnown RBP19.77■□□□□ 0.76
PRKCSH-210ENST00000589990 ORAI2Q96SN7 254 aa19.77■□□□□ 0.76
PRKCSH-210ENST00000589990 ATAD2Q6PL18 1390 aa19.77■□□□□ 0.76
PRKCSH-210ENST00000589990 ROCK1Q13464 1354 aa19.76■□□□□ 0.75
PRKCSH-210ENST00000589990 USP21Q9UK80 565 aa19.76■□□□□ 0.75
PRKCSH-210ENST00000589990 NEXMIFQ5QGS0 1516 aa19.76■□□□□ 0.75
PRKCSH-210ENST00000589990 CLTCL1P53675 1640 aa19.74■□□□□ 0.75
PRKCSH-210ENST00000589990 SOS2Q07890 1332 aaPredicted RBP19.74■□□□□ 0.75
PRKCSH-210ENST00000589990 ATRNO75882 1429 aa19.73■□□□□ 0.75
PRKCSH-210ENST00000589990 ITGAEP38570 1179 aa19.72■□□□□ 0.75
PRKCSH-210ENST00000589990 ROBO2Q9HCK4 1378 aa19.71■□□□□ 0.75
PRKCSH-210ENST00000589990 FNBP4Q8N3X1 1017 aaPredicted RBP19.71■□□□□ 0.75
PRKCSH-210ENST00000589990 TRPC5Q9UL62 973 aaPredicted RBP19.71■□□□□ 0.75
PRKCSH-210ENST00000589990 COL22A1Q8NFW1 1626 aaPredicted RBP19.69■□□□□ 0.74
PRKCSH-210ENST00000589990 ZRANB1Q9UGI0 708 aa19.69■□□□□ 0.74
PRKCSH-210ENST00000589990 PTCH1Q13635 1447 aa19.68■□□□□ 0.74
PRKCSH-210ENST00000589990 BCL9LQ86UU0 1499 aa19.67■□□□□ 0.74
PRKCSH-210ENST00000589990 MYOM2P54296 1465 aa19.67■□□□□ 0.74
PRKCSH-210ENST00000589990 XPCQ01831 940 aaPredicted RBP19.64■□□□□ 0.73
PRKCSH-210ENST00000589990 MARF1Q9Y4F3 1742 aaKnown RBP19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms