RNA–Protein interactions for RNA: ENST00000589883.1

PTBP1-215, Transcript of polypyrimidine tract binding protein 1, human

TSL 3

Gene PTBP1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTBP1-215	ENST00000589883	PROSER2	Q86WR7	435 aa	Predicted RBP	29.25	■■■□□ 2.27
PTBP1-215	ENST00000589883	SENP3	Q9H4L4	574 aa	Predicted RBP	29.25	■■■□□ 2.27
PTBP1-215	ENST00000589883	TMEM94	Q12767	1356 aa		29.25	■■■□□ 2.27
PTBP1-215	ENST00000589883	GCC2	Q8IWJ2	1684 aa		29.25	■■■□□ 2.27
PTBP1-215	ENST00000589883	UNC13B	O14795	1591 aa		29.23	■■■□□ 2.27
PTBP1-215	ENST00000589883	PPP1R15A	O75807	674 aa	Predicted RBP	29.23	■■■□□ 2.27
PTBP1-215	ENST00000589883	NKTR	P30414	1462 aa	Known RBP	29.21	■■■□□ 2.27
PTBP1-215	ENST00000589883	FAM135B	Q49AJ0	1406 aa		29.2	■■■□□ 2.27
PTBP1-215	ENST00000589883	PLEKHG1	Q9ULL1	1385 aa		29.19	■■■□□ 2.26
PTBP1-215	ENST00000589883	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	29.19	■■■□□ 2.26
PTBP1-215	ENST00000589883	ZFYVE9	O95405	1425 aa		29.18	■■■□□ 2.26
PTBP1-215	ENST00000589883	RIMS2	Q9UQ26	1411 aa		29.18	■■■□□ 2.26
PTBP1-215	ENST00000589883	CHGA	P10645	457 aa	Known RBP	29.16	■■■□□ 2.26
PTBP1-215	ENST00000589883	NWD1	Q149M9	1564 aa		29.16	■■■□□ 2.26
PTBP1-215	ENST00000589883	TMEM131L	A2VDJ0	1609 aa		29.16	■■■□□ 2.26
PTBP1-215	ENST00000589883	MYO5B	Q9ULV0	1848 aa		29.14	■■■□□ 2.26
PTBP1-215	ENST00000589883	MSH6	P52701	1360 aa		29.13	■■■□□ 2.25
PTBP1-215	ENST00000589883	IQGAP3	Q86VI3	1631 aa		29.13	■■■□□ 2.25
PTBP1-215	ENST00000589883	NUP155	O75694	1391 aa		29.13	■■■□□ 2.25
PTBP1-215	ENST00000589883		E9PCH4	1651 aa		29.12	■■■□□ 2.25
PTBP1-215	ENST00000589883	TBX22	Q9Y458	520 aa		29.11	■■■□□ 2.25
PTBP1-215	ENST00000589883	RBM33	Q96EV2	1170 aa	Known RBP	29.09	■■■□□ 2.25
PTBP1-215	ENST00000589883	CHD2	O14647	1828 aa	Known RBP	29.07	■■■□□ 2.24
PTBP1-215	ENST00000589883	ROBO1	Q9Y6N7	1651 aa		29.05	■■■□□ 2.24
PTBP1-215	ENST00000589883	NCOA3	Q9Y6Q9	1424 aa		29.04	■■■□□ 2.24
PTBP1-215	ENST00000589883	SLAIN2	Q9P270	581 aa		29.03	■■■□□ 2.24
PTBP1-215	ENST00000589883	PIK3R4	Q99570	1358 aa		29.02	■■■□□ 2.24
PTBP1-215	ENST00000589883	DIP2A	Q14689	1571 aa		29.02	■■■□□ 2.24
PTBP1-215	ENST00000589883	NAIP	Q13075	1403 aa		29.02	■■■□□ 2.24
PTBP1-215	ENST00000589883	C14orf37	Q86TY3	774 aa		29	■■■□□ 2.23
PTBP1-215	ENST00000589883	HFM1	A2PYH4	1435 aa		28.99	■■■□□ 2.23
PTBP1-215	ENST00000589883	NUTM2D	Q5VT03	806 aa	Predicted RBP	28.98	■■■□□ 2.23
PTBP1-215	ENST00000589883	ADAMTS13	Q76LX8	1427 aa		28.97	■■■□□ 2.23
PTBP1-215	ENST00000589883	CADPS2	Q86UW7	1296 aa		28.94	■■■□□ 2.22
PTBP1-215	ENST00000589883	TRPM2	O94759	1503 aa		28.93	■■■□□ 2.22
PTBP1-215	ENST00000589883	TRIM26	Q12899	539 aa	Predicted RBP	28.92	■■■□□ 2.22
PTBP1-215	ENST00000589883	C19orf44	Q9H6X5	657 aa		28.92	■■■□□ 2.22
PTBP1-215	ENST00000589883	ATF3	P18847	181 aa		28.91	■■■□□ 2.22
PTBP1-215	ENST00000589883	SPHKAP	Q2M3C7	1700 aa		28.91	■■■□□ 2.22
PTBP1-215	ENST00000589883	ZNF326	Q5BKZ1	582 aa	Known RBP	28.9	■■■□□ 2.22
PTBP1-215	ENST00000589883	RGS17	Q9UGC6	210 aa	Predicted RBP	28.9	■■■□□ 2.22
PTBP1-215	ENST00000589883	PHLPP1	O60346	1717 aa		28.89	■■■□□ 2.22
PTBP1-215	ENST00000589883	JCAD	Q9P266	1359 aa		28.88	■■■□□ 2.21
PTBP1-215	ENST00000589883	AMOTL2	Q9Y2J4	779 aa		28.88	■■■□□ 2.21
PTBP1-215	ENST00000589883	SETD5	Q9C0A6	1442 aa		28.86	■■■□□ 2.21
PTBP1-215	ENST00000589883	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	28.83	■■■□□ 2.21
PTBP1-215	ENST00000589883	SETBP1	Q9Y6X0	1596 aa		28.82	■■■□□ 2.2
PTBP1-215	ENST00000589883	TRIM52	Q96A61	297 aa		28.8	■■■□□ 2.2
PTBP1-215	ENST00000589883	DCC	P43146	1447 aa		28.78	■■■□□ 2.2
PTBP1-215	ENST00000589883	PTPRU	Q92729	1446 aa		28.78	■■■□□ 2.2
PTBP1-215	ENST00000589883	RAB3GAP2	Q9H2M9	1393 aa		28.78	■■■□□ 2.2
PTBP1-215	ENST00000589883	COL16A1	Q07092	1604 aa	Predicted RBP	28.76	■■■□□ 2.2
PTBP1-215	ENST00000589883	SPATA31A6	Q5VVP1	1343 aa		28.76	■■■□□ 2.19
PTBP1-215	ENST00000589883	NRXN3	Q9Y4C0	1643 aa		28.76	■■■□□ 2.19
PTBP1-215	ENST00000589883	POTEA	Q6S8J7	498 aa		28.75	■■■□□ 2.19
PTBP1-215	ENST00000589883	KIF1B	O60333	1816 aa		28.74	■■■□□ 2.19
PTBP1-215	ENST00000589883	AHDC1	Q5TGY3	1603 aa	Predicted RBP	28.74	■■■□□ 2.19
PTBP1-215	ENST00000589883	CLTCL1	P53675	1640 aa		28.73	■■■□□ 2.19
PTBP1-215	ENST00000589883	XRN1	Q8IZH2	1706 aa	Known RBP	28.73	■■■□□ 2.19
PTBP1-215	ENST00000589883	NEXMIF	Q5QGS0	1516 aa		28.7	■■■□□ 2.19
PTBP1-215	ENST00000589883	MEX3C	Q5U5Q3	659 aa	Known RBP	28.7	■■■□□ 2.18
PTBP1-215	ENST00000589883	BRINP3	Q76B58	766 aa		28.7	■■■□□ 2.18
PTBP1-215	ENST00000589883	MET	P08581	1390 aa		28.7	■■■□□ 2.18
PTBP1-215	ENST00000589883	VGF	O15240	615 aa	Predicted RBP	28.69	■■■□□ 2.18
PTBP1-215	ENST00000589883	SLC4A1AP	Q9BWU0	796 aa	Known RBP	28.67	■■■□□ 2.18
PTBP1-215	ENST00000589883	SHPRH	Q149N8	1683 aa		28.65	■■■□□ 2.18
PTBP1-215	ENST00000589883	RPGRIP1L	Q68CZ1	1315 aa		28.65	■■■□□ 2.18
PTBP1-215	ENST00000589883	ZNF772	Q68DY9	489 aa	Predicted RBP	28.64	■■■□□ 2.18
PTBP1-215	ENST00000589883	ADGRL3	Q9HAR2	1447 aa		28.63	■■■□□ 2.17
PTBP1-215	ENST00000589883	MST1R	Q04912	1400 aa		28.62	■■■□□ 2.17
PTBP1-215	ENST00000589883	PCGF6	Q9BYE7	350 aa		28.62	■■■□□ 2.17
PTBP1-215	ENST00000589883	ASXL1	Q8IXJ9	1541 aa		28.62	■■■□□ 2.17
PTBP1-215	ENST00000589883	ACIN1	Q9UKV3	1341 aa	Known RBP	28.6	■■■□□ 2.17
PTBP1-215	ENST00000589883	LRP6	O75581	1613 aa		28.59	■■■□□ 2.17
PTBP1-215	ENST00000589883	HRC	P23327	699 aa		28.59	■■■□□ 2.17
PTBP1-215	ENST00000589883	LRRC59	Q96AG4	307 aa	Known RBP	28.58	■■■□□ 2.17
PTBP1-215	ENST00000589883	MPHOSPH9	Q99550	1183 aa		28.57	■■■□□ 2.16
PTBP1-215	ENST00000589883	PTCH1	Q13635	1447 aa		28.56	■■■□□ 2.16
PTBP1-215	ENST00000589883	NHSL1	Q5SYE7	1610 aa		28.54	■■■□□ 2.16
PTBP1-215	ENST00000589883	NUTM2B	A6NNL0	878 aa	Predicted RBP	28.53	■■■□□ 2.16
PTBP1-215	ENST00000589883	NUTM2E	B1AL46	878 aa	Predicted RBP	28.53	■■■□□ 2.16
PTBP1-215	ENST00000589883	NUTM2A	Q8IVF1	878 aa	Predicted RBP	28.53	■■■□□ 2.16
PTBP1-215	ENST00000589883	NALCN	Q8IZF0	1738 aa		28.52	■■■□□ 2.16
PTBP1-215	ENST00000589883	FOXD1	Q16676	465 aa		28.52	■■■□□ 2.16
PTBP1-215	ENST00000589883	PRAG1	Q86YV5	1406 aa		28.49	■■■□□ 2.15
PTBP1-215	ENST00000589883	PPL	O60437	1756 aa		28.48	■■■□□ 2.15
PTBP1-215	ENST00000589883	SETD1A	O15047	1707 aa	Known RBP	28.48	■■■□□ 2.15
PTBP1-215	ENST00000589883	C1orf167	Q5SNV9	1468 aa		28.47	■■■□□ 2.15
PTBP1-215	ENST00000589883	CCDC144A	A2RUR9	1427 aa		28.47	■■■□□ 2.15
PTBP1-215	ENST00000589883	ROBO2	Q9HCK4	1378 aa		28.47	■■■□□ 2.15
PTBP1-215	ENST00000589883	RXRB	P28702	533 aa		28.46	■■■□□ 2.15
PTBP1-215	ENST00000589883	PNPLA6	Q8IY17	1366 aa		28.42	■■■□□ 2.14
PTBP1-215	ENST00000589883	DDX17	Q92841	729 aa	Known RBP	28.42	■■■□□ 2.14
PTBP1-215	ENST00000589883	AFF2	P51816	1311 aa		28.42	■■■□□ 2.14
PTBP1-215	ENST00000589883	ANKRD30B	Q9BXX2	1392 aa		28.4	■■■□□ 2.14
PTBP1-215	ENST00000589883	RGL3	Q3MIN7	710 aa		28.38	■■■□□ 2.13
PTBP1-215	ENST00000589883	LAMC1	P11047	1609 aa		28.37	■■■□□ 2.13
PTBP1-215	ENST00000589883	C8orf37	Q96NL8	207 aa		28.37	■■■□□ 2.13
PTBP1-215	ENST00000589883	ORAI2	Q96SN7	254 aa		28.37	■■■□□ 2.13
PTBP1-215	ENST00000589883	CDK12	Q9NYV4	1490 aa	Predicted RBP	28.37	■■■□□ 2.13

Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms