RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 RRBP1Q9P2E9 1410 aaKnown RBP18.61■□□□□ 0.57
VAT1-206ENST00000589709 RIMS2Q9UQ26 1411 aa18.61■□□□□ 0.57
VAT1-206ENST00000589709 PLEKHG1Q9ULL1 1385 aa18.61■□□□□ 0.57
VAT1-206ENST00000589709 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.61■□□□□ 0.57
VAT1-206ENST00000589709 E9PCH4 1651 aa18.6■□□□□ 0.57
VAT1-206ENST00000589709 TMEM94Q12767 1356 aa18.6■□□□□ 0.57
VAT1-206ENST00000589709 BCANQ96GW7 911 aa18.6■□□□□ 0.57
VAT1-206ENST00000589709 PPP1R15AO75807 674 aaPredicted RBP18.59■□□□□ 0.57
VAT1-206ENST00000589709 PROSER2Q86WR7 435 aaPredicted RBP18.59■□□□□ 0.57
VAT1-206ENST00000589709 SOCS7O14512 581 aa18.58■□□□□ 0.56
VAT1-206ENST00000589709 CHGAP10645 457 aaKnown RBP18.58■□□□□ 0.56
VAT1-206ENST00000589709 TBX22Q9Y458 520 aa18.58■□□□□ 0.56
VAT1-206ENST00000589709 XIRP1Q702N8 1843 aaKnown RBP18.57■□□□□ 0.56
VAT1-206ENST00000589709 NKTRP30414 1462 aaKnown RBP18.57■□□□□ 0.56
VAT1-206ENST00000589709 NWD1Q149M9 1564 aa18.55■□□□□ 0.56
VAT1-206ENST00000589709 MYO5BQ9ULV0 1848 aa18.55■□□□□ 0.56
VAT1-206ENST00000589709 FAM135BQ49AJ0 1406 aa18.55■□□□□ 0.56
VAT1-206ENST00000589709 NAIPQ13075 1403 aa18.52■□□□□ 0.56
VAT1-206ENST00000589709 MED1Q15648 1581 aaPredicted RBP18.51■□□□□ 0.55
VAT1-206ENST00000589709 RBM33Q96EV2 1170 aaKnown RBP18.51■□□□□ 0.55
VAT1-206ENST00000589709 PIK3R4Q99570 1358 aa18.51■□□□□ 0.55
VAT1-206ENST00000589709 ADAMTS13Q76LX8 1427 aa18.5■□□□□ 0.55
VAT1-206ENST00000589709 SENP3Q9H4L4 574 aaPredicted RBP18.5■□□□□ 0.55
VAT1-206ENST00000589709 NCOA3Q9Y6Q9 1424 aa18.49■□□□□ 0.55
VAT1-206ENST00000589709 NUTM2DQ5VT03 806 aaPredicted RBP18.49■□□□□ 0.55
VAT1-206ENST00000589709 CHD2O14647 1828 aaKnown RBP18.49■□□□□ 0.55
VAT1-206ENST00000589709 MSH6P52701 1360 aa18.48■□□□□ 0.55
VAT1-206ENST00000589709 DIP2AQ14689 1571 aa18.47■□□□□ 0.55
VAT1-206ENST00000589709 SLAIN2Q9P270 581 aa18.46■□□□□ 0.55
VAT1-206ENST00000589709 HFM1A2PYH4 1435 aa18.46■□□□□ 0.55
VAT1-206ENST00000589709 SPHKAPQ2M3C7 1700 aa18.44■□□□□ 0.54
VAT1-206ENST00000589709 PHF23Q9BUL5 403 aaPredicted RBP18.43■□□□□ 0.54
VAT1-206ENST00000589709 ZNF326Q5BKZ1 582 aaKnown RBP18.42■□□□□ 0.54
VAT1-206ENST00000589709 C19orf44Q9H6X5 657 aa18.42■□□□□ 0.54
VAT1-206ENST00000589709 AMOTL2Q9Y2J4 779 aa18.42■□□□□ 0.54
VAT1-206ENST00000589709 TRPM2O94759 1503 aa18.41■□□□□ 0.54
VAT1-206ENST00000589709 TRIM52Q96A61 297 aa18.41■□□□□ 0.54
VAT1-206ENST00000589709 ROBO1Q9Y6N7 1651 aa18.4■□□□□ 0.54
VAT1-206ENST00000589709 SETBP1Q9Y6X0 1596 aa18.39■□□□□ 0.53
VAT1-206ENST00000589709 C14orf37Q86TY3 774 aa18.39■□□□□ 0.53
VAT1-206ENST00000589709 CADPS2Q86UW7 1296 aa18.39■□□□□ 0.53
VAT1-206ENST00000589709 PTPRUQ92729 1446 aa18.39■□□□□ 0.53
VAT1-206ENST00000589709 CLTCL1P53675 1640 aa18.38■□□□□ 0.53
VAT1-206ENST00000589709 SLC4A1APQ9BWU0 796 aaKnown RBP18.37■□□□□ 0.53
VAT1-206ENST00000589709 ATF3P18847 181 aa18.36■□□□□ 0.53
VAT1-206ENST00000589709 NRXN3Q9Y4C0 1643 aa18.36■□□□□ 0.53
VAT1-206ENST00000589709 NEXMIFQ5QGS0 1516 aa18.34■□□□□ 0.53
VAT1-206ENST00000589709 METP08581 1390 aa18.34■□□□□ 0.53
VAT1-206ENST00000589709 RPGRIP1LQ68CZ1 1315 aa18.34■□□□□ 0.53
VAT1-206ENST00000589709 VGFO15240 615 aaPredicted RBP18.34■□□□□ 0.53
VAT1-206ENST00000589709 RGS17Q9UGC6 210 aaPredicted RBP18.33■□□□□ 0.52
VAT1-206ENST00000589709 XRN1Q8IZH2 1706 aaKnown RBP18.32■□□□□ 0.52
VAT1-206ENST00000589709 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.32■□□□□ 0.52
VAT1-206ENST00000589709 DCCP43146 1447 aa18.32■□□□□ 0.52
VAT1-206ENST00000589709 JCADQ9P266 1359 aa18.31■□□□□ 0.52
VAT1-206ENST00000589709 KIF1BO60333 1816 aa18.31■□□□□ 0.52
VAT1-206ENST00000589709 ACIN1Q9UKV3 1341 aaKnown RBP18.28■□□□□ 0.52
VAT1-206ENST00000589709 PHLPP1O60346 1717 aa18.28■□□□□ 0.52
VAT1-206ENST00000589709 BRINP3Q76B58 766 aa18.26■□□□□ 0.51
VAT1-206ENST00000589709 MPHOSPH9Q99550 1183 aa18.26■□□□□ 0.51
VAT1-206ENST00000589709 COL16A1Q07092 1604 aaPredicted RBP18.25■□□□□ 0.51
VAT1-206ENST00000589709 AHDC1Q5TGY3 1603 aaPredicted RBP18.25■□□□□ 0.51
VAT1-206ENST00000589709 FOXD1Q16676 465 aa18.25■□□□□ 0.51
VAT1-206ENST00000589709 ADGRL3Q9HAR2 1447 aa18.24■□□□□ 0.51
VAT1-206ENST00000589709 SPATA31A6Q5VVP1 1343 aa18.23■□□□□ 0.51
VAT1-206ENST00000589709 MST1RQ04912 1400 aa18.23■□□□□ 0.51
VAT1-206ENST00000589709 PRAG1Q86YV5 1406 aa18.23■□□□□ 0.51
VAT1-206ENST00000589709 CCDC144AA2RUR9 1427 aa18.22■□□□□ 0.51
VAT1-206ENST00000589709 PTCH1Q13635 1447 aa18.22■□□□□ 0.51
VAT1-206ENST00000589709 POTEAQ6S8J7 498 aa18.21■□□□□ 0.51
VAT1-206ENST00000589709 SPATA31E1Q6ZUB1 1445 aa18.2■□□□□ 0.5
VAT1-206ENST00000589709 PPLO60437 1756 aa18.19■□□□□ 0.5
VAT1-206ENST00000589709 ASXL1Q8IXJ9 1541 aa18.18■□□□□ 0.5
VAT1-206ENST00000589709 ANKRD30BQ9BXX2 1392 aa18.18■□□□□ 0.5
VAT1-206ENST00000589709 ROBO2Q9HCK4 1378 aa18.18■□□□□ 0.5
VAT1-206ENST00000589709 SETD1AO15047 1707 aaKnown RBP18.18■□□□□ 0.5
VAT1-206ENST00000589709 SETD5Q9C0A6 1442 aa18.18■□□□□ 0.5
VAT1-206ENST00000589709 RGL3Q3MIN7 710 aa18.17■□□□□ 0.5
VAT1-206ENST00000589709 ADGRF5Q8IZF2 1346 aa18.17■□□□□ 0.5
VAT1-206ENST00000589709 LRRC59Q96AG4 307 aaKnown RBP18.16■□□□□ 0.5
VAT1-206ENST00000589709 SHPRHQ149N8 1683 aa18.15■□□□□ 0.5
VAT1-206ENST00000589709 C1orf167Q5SNV9 1468 aa18.14■□□□□ 0.5
VAT1-206ENST00000589709 LRP6O75581 1613 aa18.14■□□□□ 0.49
VAT1-206ENST00000589709 NALCNQ8IZF0 1738 aa18.14■□□□□ 0.49
VAT1-206ENST00000589709 NHSL1Q5SYE7 1610 aa18.12■□□□□ 0.49
VAT1-206ENST00000589709 MEX3CQ5U5Q3 659 aaKnown RBP18.12■□□□□ 0.49
VAT1-206ENST00000589709 ZNF772Q68DY9 489 aaPredicted RBP18.11■□□□□ 0.49
VAT1-206ENST00000589709 TECPR2O15040 1411 aa18.1■□□□□ 0.49
VAT1-206ENST00000589709 LRPPRCP42704 1394 aaKnown RBP18.1■□□□□ 0.49
VAT1-206ENST00000589709 ABCC11Q96J66 1382 aa18.1■□□□□ 0.49
VAT1-206ENST00000589709 RAB3GAP2Q9H2M9 1393 aa18.09■□□□□ 0.49
VAT1-206ENST00000589709 DDX17Q92841 729 aaKnown RBP18.09■□□□□ 0.49
VAT1-206ENST00000589709 PIK3C2GO75747 1445 aa18.08■□□□□ 0.49
VAT1-206ENST00000589709 SOS2Q07890 1332 aaPredicted RBP18.08■□□□□ 0.49
VAT1-206ENST00000589709 ORAI2Q96SN7 254 aa18.08■□□□□ 0.48
VAT1-206ENST00000589709 PNPLA6Q8IY17 1366 aa18.07■□□□□ 0.48
VAT1-206ENST00000589709 IFT172Q9UG01 1749 aa18.07■□□□□ 0.48
VAT1-206ENST00000589709 NUTM2BA6NNL0 878 aaPredicted RBP18.07■□□□□ 0.48
VAT1-206ENST00000589709 NUTM2EB1AL46 878 aaPredicted RBP18.07■□□□□ 0.48
VAT1-206ENST00000589709 NUTM2AQ8IVF1 878 aaPredicted RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms