RNA–Protein interactions for RNA: ENST00000589638.1

TMED1-205, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 5

Gene TMED1, Length 578 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-205ENST00000589638 RIMS2Q9UQ26 1411 aa25.18■■□□□ 1.62
TMED1-205ENST00000589638 UBR1Q8IWV7 1749 aa25.17■■□□□ 1.62
TMED1-205ENST00000589638 IFT172Q9UG01 1749 aa25.17■■□□□ 1.62
TMED1-205ENST00000589638 CEP170BQ9Y4F5 1589 aaPredicted RBP25.16■■□□□ 1.62
TMED1-205ENST00000589638 VGFO15240 615 aaPredicted RBP25.15■■□□□ 1.62
TMED1-205ENST00000589638 PPLO60437 1756 aa25.15■■□□□ 1.62
TMED1-205ENST00000589638 SENP3Q9H4L4 574 aaPredicted RBP25.14■■□□□ 1.62
TMED1-205ENST00000589638 TMEM2Q9UHN6 1383 aa25.14■■□□□ 1.61
TMED1-205ENST00000589638 THEMISQ8N1K5 641 aaPredicted RBP25.13■■□□□ 1.61
TMED1-205ENST00000589638 KDM5AP29375 1690 aaKnown RBP25.13■■□□□ 1.61
TMED1-205ENST00000589638 ZFYVE9O95405 1425 aa25.12■■□□□ 1.61
TMED1-205ENST00000589638 RALGAPBQ86X10 1494 aa25.11■■□□□ 1.61
TMED1-205ENST00000589638 NRXN1Q9ULB1 1477 aa25.11■■□□□ 1.61
TMED1-205ENST00000589638 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.11■■□□□ 1.61
TMED1-205ENST00000589638 HDGFP51858 240 aaKnown RBP25.09■■□□□ 1.61
TMED1-205ENST00000589638 ROCK2O75116 1388 aaKnown RBP25.08■■□□□ 1.61
TMED1-205ENST00000589638 ZNF142P52746 1687 aaPredicted RBP25.08■■□□□ 1.61
TMED1-205ENST00000589638 NBPF1Q3BBV0 1214 aa25.08■■□□□ 1.61
TMED1-205ENST00000589638 PIK3C2GO75747 1445 aa25.08■■□□□ 1.61
TMED1-205ENST00000589638 CFAP70Q5T0N1 1121 aa25.07■■□□□ 1.6
TMED1-205ENST00000589638 SETD1BQ9UPS6 1966 aaKnown RBP25.07■■□□□ 1.6
TMED1-205ENST00000589638 TRPM1Q7Z4N2 1603 aa25.06■■□□□ 1.6
TMED1-205ENST00000589638 TXNDC2Q86VQ3 553 aa25.06■■□□□ 1.6
TMED1-205ENST00000589638 EID1Q9Y6B2 187 aa25.06■■□□□ 1.6
TMED1-205ENST00000589638 ARHGAP23Q9P227 1491 aa25.05■■□□□ 1.6
TMED1-205ENST00000589638 LTKP29376 864 aa25.05■■□□□ 1.6
TMED1-205ENST00000589638 CARD11Q9BXL7 1154 aa25.05■■□□□ 1.6
TMED1-205ENST00000589638 SLIT1O75093 1534 aa25.05■■□□□ 1.6
TMED1-205ENST00000589638 BCANQ96GW7 911 aa25.03■■□□□ 1.6
TMED1-205ENST00000589638 C14orf93Q9H972 538 aaKnown RBP25.02■■□□□ 1.6
TMED1-205ENST00000589638 GPRASP1Q5JY77 1395 aa24.99■■□□□ 1.59
TMED1-205ENST00000589638 SCAF11Q99590 1463 aaKnown RBP24.97■■□□□ 1.59
TMED1-205ENST00000589638 EIF4G2P78344 907 aaKnown RBP eCLIP24.97■■□□□ 1.59
TMED1-205ENST00000589638 ANKLE2Q86XL3 938 aa24.97■■□□□ 1.59
TMED1-205ENST00000589638 HIRIP3Q9BW71 556 aaPredicted RBP24.97■■□□□ 1.59
TMED1-205ENST00000589638 PLEKHG1Q9ULL1 1385 aa24.96■■□□□ 1.59
TMED1-205ENST00000589638 HSPA5P11021 654 aaKnown RBP24.96■■□□□ 1.59
TMED1-205ENST00000589638 TMEM132EQ6IEE7 984 aa24.96■■□□□ 1.59
TMED1-205ENST00000589638 KIAA1210Q9ULL0 1709 aa24.95■■□□□ 1.59
TMED1-205ENST00000589638 USP47Q96K76 1375 aa24.95■■□□□ 1.59
TMED1-205ENST00000589638 HSPA2P54652 639 aa24.93■■□□□ 1.58
TMED1-205ENST00000589638 ALKQ9UM73 1620 aa24.93■■□□□ 1.58
TMED1-205ENST00000589638 SETBP1Q9Y6X0 1596 aa24.92■■□□□ 1.58
TMED1-205ENST00000589638 LAMC1P11047 1609 aa24.91■■□□□ 1.58
TMED1-205ENST00000589638 ZNF316A6NFI3 1004 aaPredicted RBP24.91■■□□□ 1.58
TMED1-205ENST00000589638 NRXN3Q9Y4C0 1643 aa24.9■■□□□ 1.58
TMED1-205ENST00000589638 LMTK3Q96Q04 1460 aa24.9■■□□□ 1.58
TMED1-205ENST00000589638 NCKAP5LQ9HCH0 1330 aa24.9■■□□□ 1.58
TMED1-205ENST00000589638 ADGRB1O14514 1584 aa24.9■■□□□ 1.58
TMED1-205ENST00000589638 IQGAP1P46940 1657 aa24.9■■□□□ 1.58
TMED1-205ENST00000589638 SLC26A8Q96RN1 970 aa24.89■■□□□ 1.58
TMED1-205ENST00000589638 ASXL1Q8IXJ9 1541 aa24.89■■□□□ 1.57
TMED1-205ENST00000589638 ADAMTS13Q76LX8 1427 aa24.88■■□□□ 1.57
TMED1-205ENST00000589638 STK26Q9P289 416 aa24.86■■□□□ 1.57
TMED1-205ENST00000589638 TRAK1Q9UPV9 953 aa24.86■■□□□ 1.57
TMED1-205ENST00000589638 METP08581 1390 aa24.85■■□□□ 1.57
TMED1-205ENST00000589638 ST20-MTHFSA0A0A6YYL1 179 aa24.84■■□□□ 1.57
TMED1-205ENST00000589638 NPHP4O75161 1426 aaPredicted RBP24.84■■□□□ 1.57
TMED1-205ENST00000589638 SETD1AO15047 1707 aaKnown RBP24.82■■□□□ 1.56
TMED1-205ENST00000589638 YTHDC2Q9H6S0 1430 aaKnown RBP24.82■■□□□ 1.56
TMED1-205ENST00000589638 EIF3AQ14152 1382 aaKnown RBP24.81■■□□□ 1.56
TMED1-205ENST00000589638 TBX22Q9Y458 520 aa24.81■■□□□ 1.56
TMED1-205ENST00000589638 MED14O60244 1454 aa24.81■■□□□ 1.56
TMED1-205ENST00000589638 LRPPRCP42704 1394 aaKnown RBP24.8■■□□□ 1.56
TMED1-205ENST00000589638 POLR1AO95602 1720 aaPredicted RBP24.79■■□□□ 1.56
TMED1-205ENST00000589638 DIP2AQ14689 1571 aa24.78■■□□□ 1.56
TMED1-205ENST00000589638 CENPJQ9HC77 1338 aaPredicted RBP24.74■■□□□ 1.55
TMED1-205ENST00000589638 PTPRUQ92729 1446 aa24.73■■□□□ 1.55
TMED1-205ENST00000589638 ABCC11Q96J66 1382 aa24.72■■□□□ 1.55
TMED1-205ENST00000589638 SAFB2Q14151 953 aaKnown RBP eCLIP24.71■■□□□ 1.55
TMED1-205ENST00000589638 PRAM1Q96QH2 718 aa24.71■■□□□ 1.55
TMED1-205ENST00000589638 TESK2Q96S53 571 aa24.71■■□□□ 1.55
TMED1-205ENST00000589638 POGKQ9P215 609 aa24.71■■□□□ 1.55
TMED1-205ENST00000589638 AMOTL2Q9Y2J4 779 aa24.71■■□□□ 1.55
TMED1-205ENST00000589638 C11orf95C9JLR9 678 aaPredicted RBP24.7■■□□□ 1.54
TMED1-205ENST00000589638 ARHGEF28Q8N1W1 1705 aaKnown RBP24.69■■□□□ 1.54
TMED1-205ENST00000589638 PIK3R4Q99570 1358 aa24.68■■□□□ 1.54
TMED1-205ENST00000589638 DLC1Q96QB1 1528 aa24.68■■□□□ 1.54
TMED1-205ENST00000589638 WAPLQ7Z5K2 1190 aa24.68■■□□□ 1.54
TMED1-205ENST00000589638 POLR3GLQ9BT43 218 aa24.68■■□□□ 1.54
TMED1-205ENST00000589638 PLEKHH1Q9ULM0 1364 aa24.67■■□□□ 1.54
TMED1-205ENST00000589638 TECPR2O15040 1411 aa24.67■■□□□ 1.54
TMED1-205ENST00000589638 TMF1P82094 1093 aa24.66■■□□□ 1.54
TMED1-205ENST00000589638 ROBO2Q9HCK4 1378 aa24.66■■□□□ 1.54
TMED1-205ENST00000589638 WASHC2AQ641Q2 1341 aa24.65■■□□□ 1.54
TMED1-205ENST00000589638 AEBP2Q6ZN18 517 aaPredicted RBP24.65■■□□□ 1.54
TMED1-205ENST00000589638 DISP3Q9P2K9 1392 aa24.65■■□□□ 1.54
TMED1-205ENST00000589638 KIF7Q2M1P5 1343 aa24.64■■□□□ 1.54
TMED1-205ENST00000589638 KNDC1Q76NI1 1749 aa24.64■■□□□ 1.54
TMED1-205ENST00000589638 CPS1P31327 1500 aa24.64■■□□□ 1.53
TMED1-205ENST00000589638 STRCQ7RTU9 1775 aa24.64■■□□□ 1.53
TMED1-205ENST00000589638 CCDC7Q96M83 1385 aa24.64■■□□□ 1.53
TMED1-205ENST00000589638 KCNA6P17658 529 aa24.63■■□□□ 1.53
TMED1-205ENST00000589638 QRICH2Q9H0J4 1663 aa24.62■■□□□ 1.53
TMED1-205ENST00000589638 MINK1Q8N4C8 1332 aaPredicted RBP24.62■■□□□ 1.53
TMED1-205ENST00000589638 FAM135BQ49AJ0 1406 aa24.62■■□□□ 1.53
TMED1-205ENST00000589638 SIRT1Q96EB6 747 aa24.62■■□□□ 1.53
TMED1-205ENST00000589638 SBNO2Q9Y2G9 1366 aa24.61■■□□□ 1.53
TMED1-205ENST00000589638 PTCH1Q13635 1447 aa24.61■■□□□ 1.53
TMED1-205ENST00000589638 XRN1Q8IZH2 1706 aaKnown RBP24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms