RNA–Protein interactions for RNA: ENST00000588941.1

RDH13-211, Transcript of retinol dehydrogenase 13, humanhuman

TSL 3

Gene RDH13, Length 702 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-211ENST00000588941 RPRD2Q5VT52 1461 aaKnown RBP11.51□□□□□ -0.57
RDH13-211ENST00000588941 TET3O43151 1660 aa11.5□□□□□ -0.57
RDH13-211ENST00000588941 PPP1R15AO75807 674 aaPredicted RBP11.5□□□□□ -0.57
RDH13-211ENST00000588941 RRBP1Q9P2E9 1410 aaKnown RBP11.5□□□□□ -0.57
RDH13-211ENST00000588941 NUTM2DQ5VT03 806 aaPredicted RBP11.49□□□□□ -0.57
RDH13-211ENST00000588941 UNC13BO14795 1591 aa11.49□□□□□ -0.57
RDH13-211ENST00000588941 HSPA1LP34931 641 aa11.48□□□□□ -0.57
RDH13-211ENST00000588941 PROSER2Q86WR7 435 aaPredicted RBP11.48□□□□□ -0.57
RDH13-211ENST00000588941 TRIM52Q96A61 297 aa11.48□□□□□ -0.57
RDH13-211ENST00000588941 STRCP1A6NGW2 1772 aa11.47□□□□□ -0.57
RDH13-211ENST00000588941 KDM5AP29375 1690 aaKnown RBP11.47□□□□□ -0.57
RDH13-211ENST00000588941 GCC2Q8IWJ2 1684 aa11.47□□□□□ -0.57
RDH13-211ENST00000588941 LRRC7Q96NW7 1537 aa11.47□□□□□ -0.57
RDH13-211ENST00000588941 SOCS7O14512 581 aa11.47□□□□□ -0.57
RDH13-211ENST00000588941 KCNA6P17658 529 aa11.47□□□□□ -0.57
RDH13-211ENST00000588941 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.47□□□□□ -0.57
RDH13-211ENST00000588941 E9PCH4 1651 aa11.46□□□□□ -0.57
RDH13-211ENST00000588941 ADGRB3O60242 1522 aa11.46□□□□□ -0.57
RDH13-211ENST00000588941 RBM33Q96EV2 1170 aaKnown RBP11.46□□□□□ -0.57
RDH13-211ENST00000588941 IQGAP3Q86VI3 1631 aa11.46□□□□□ -0.58
RDH13-211ENST00000588941 RIMS2Q9UQ26 1411 aa11.45□□□□□ -0.58
RDH13-211ENST00000588941 MYO5BQ9ULV0 1848 aa11.44□□□□□ -0.58
RDH13-211ENST00000588941 ZNF326Q5BKZ1 582 aaKnown RBP11.44□□□□□ -0.58
RDH13-211ENST00000588941 TMEM131LA2VDJ0 1609 aa11.43□□□□□ -0.58
RDH13-211ENST00000588941 CNKSR2Q8WXI2 1034 aa11.43□□□□□ -0.58
RDH13-211ENST00000588941 TBX22Q9Y458 520 aa11.43□□□□□ -0.58
RDH13-211ENST00000588941 NAIPQ13075 1403 aa11.43□□□□□ -0.58
RDH13-211ENST00000588941 PLEKHG1Q9ULL1 1385 aa11.42□□□□□ -0.58
RDH13-211ENST00000588941 ZFYVE9O95405 1425 aa11.42□□□□□ -0.58
RDH13-211ENST00000588941 TMEM94Q12767 1356 aa11.41□□□□□ -0.58
RDH13-211ENST00000588941 SLC4A1APQ9BWU0 796 aaKnown RBP11.41□□□□□ -0.58
RDH13-211ENST00000588941 C14orf37Q86TY3 774 aa11.39□□□□□ -0.59
RDH13-211ENST00000588941 HFM1A2PYH4 1435 aa11.38□□□□□ -0.59
RDH13-211ENST00000588941 RNF39Q9H2S5 420 aa11.38□□□□□ -0.59
RDH13-211ENST00000588941 ALKQ9UM73 1620 aa11.38□□□□□ -0.59
RDH13-211ENST00000588941 XIRP1Q702N8 1843 aaKnown RBP11.37□□□□□ -0.59
RDH13-211ENST00000588941 AMOTL2Q9Y2J4 779 aa11.37□□□□□ -0.59
RDH13-211ENST00000588941 MSH6P52701 1360 aa11.37□□□□□ -0.59
RDH13-211ENST00000588941 SPHKAPQ2M3C7 1700 aa11.37□□□□□ -0.59
RDH13-211ENST00000588941 RNF216Q9NWF9 866 aaPredicted RBP11.36□□□□□ -0.59
RDH13-211ENST00000588941 SLAIN2Q9P270 581 aa11.36□□□□□ -0.59
RDH13-211ENST00000588941 CHD2O14647 1828 aaKnown RBP11.36□□□□□ -0.59
RDH13-211ENST00000588941 ADAMTS13Q76LX8 1427 aa11.35□□□□□ -0.59
RDH13-211ENST00000588941 NKTRP30414 1462 aaKnown RBP11.34□□□□□ -0.59
RDH13-211ENST00000588941 VGFO15240 615 aaPredicted RBP11.34□□□□□ -0.59
RDH13-211ENST00000588941 FAM135BQ49AJ0 1406 aa11.34□□□□□ -0.59
RDH13-211ENST00000588941 PIK3R4Q99570 1358 aa11.33□□□□□ -0.6
RDH13-211ENST00000588941 ATF3P18847 181 aa11.33□□□□□ -0.6
RDH13-211ENST00000588941 MPHOSPH9Q99550 1183 aa11.33□□□□□ -0.6
RDH13-211ENST00000588941 C19orf44Q9H6X5 657 aa11.33□□□□□ -0.6
RDH13-211ENST00000588941 NWD1Q149M9 1564 aa11.33□□□□□ -0.6
RDH13-211ENST00000588941 KIF1BO60333 1816 aa11.32□□□□□ -0.6
RDH13-211ENST00000588941 CLTCL1P53675 1640 aa11.31□□□□□ -0.6
RDH13-211ENST00000588941 TRPM2O94759 1503 aa11.31□□□□□ -0.6
RDH13-211ENST00000588941 RGL3Q3MIN7 710 aa11.31□□□□□ -0.6
RDH13-211ENST00000588941 CADPS2Q86UW7 1296 aa11.31□□□□□ -0.6
RDH13-211ENST00000588941 RPGRIP1LQ68CZ1 1315 aa11.31□□□□□ -0.6
RDH13-211ENST00000588941 DIP2AQ14689 1571 aa11.3□□□□□ -0.6
RDH13-211ENST00000588941 NCOA3Q9Y6Q9 1424 aa11.3□□□□□ -0.6
RDH13-211ENST00000588941 METP08581 1390 aa11.29□□□□□ -0.6
RDH13-211ENST00000588941 PTPRUQ92729 1446 aa11.29□□□□□ -0.6
RDH13-211ENST00000588941 ACIN1Q9UKV3 1341 aaKnown RBP11.29□□□□□ -0.6
RDH13-211ENST00000588941 MED1Q15648 1581 aaPredicted RBP11.28□□□□□ -0.6
RDH13-211ENST00000588941 SETD5Q9C0A6 1442 aa11.28□□□□□ -0.6
RDH13-211ENST00000588941 ROBO1Q9Y6N7 1651 aa11.28□□□□□ -0.6
RDH13-211ENST00000588941 NEXMIFQ5QGS0 1516 aa11.27□□□□□ -0.61
RDH13-211ENST00000588941 CCDC144AA2RUR9 1427 aa11.26□□□□□ -0.61
RDH13-211ENST00000588941 SETBP1Q9Y6X0 1596 aa11.26□□□□□ -0.61
RDH13-211ENST00000588941 NRXN3Q9Y4C0 1643 aa11.25□□□□□ -0.61
RDH13-211ENST00000588941 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.25□□□□□ -0.61
RDH13-211ENST00000588941 RAB3GAP2Q9H2M9 1393 aa11.25□□□□□ -0.61
RDH13-211ENST00000588941 ADGRF5Q8IZF2 1346 aa11.23□□□□□ -0.61
RDH13-211ENST00000588941 PHLPP1O60346 1717 aa11.22□□□□□ -0.61
RDH13-211ENST00000588941 BRINP3Q76B58 766 aa11.22□□□□□ -0.61
RDH13-211ENST00000588941 STK26Q9P289 416 aa11.22□□□□□ -0.61
RDH13-211ENST00000588941 JCADQ9P266 1359 aa11.21□□□□□ -0.61
RDH13-211ENST00000588941 RGS17Q9UGC6 210 aaPredicted RBP11.21□□□□□ -0.61
RDH13-211ENST00000588941 XRN1Q8IZH2 1706 aaKnown RBP11.21□□□□□ -0.62
RDH13-211ENST00000588941 ANKRD30BQ9BXX2 1392 aa11.2□□□□□ -0.62
RDH13-211ENST00000588941 TMEM132EQ6IEE7 984 aa11.2□□□□□ -0.62
RDH13-211ENST00000588941 PPLO60437 1756 aa11.2□□□□□ -0.62
RDH13-211ENST00000588941 DCCP43146 1447 aa11.19□□□□□ -0.62
RDH13-211ENST00000588941 ROBO2Q9HCK4 1378 aa11.19□□□□□ -0.62
RDH13-211ENST00000588941 MEX3CQ5U5Q3 659 aaKnown RBP11.19□□□□□ -0.62
RDH13-211ENST00000588941 SPATA31E1Q6ZUB1 1445 aa11.18□□□□□ -0.62
RDH13-211ENST00000588941 ADGRL3Q9HAR2 1447 aa11.18□□□□□ -0.62
RDH13-211ENST00000588941 NUTM2BA6NNL0 878 aaPredicted RBP11.18□□□□□ -0.62
RDH13-211ENST00000588941 NUTM2EB1AL46 878 aaPredicted RBP11.18□□□□□ -0.62
RDH13-211ENST00000588941 WAPLQ7Z5K2 1190 aa11.18□□□□□ -0.62
RDH13-211ENST00000588941 NUTM2AQ8IVF1 878 aaPredicted RBP11.18□□□□□ -0.62
RDH13-211ENST00000588941 DDX17Q92841 729 aaKnown RBP11.18□□□□□ -0.62
RDH13-211ENST00000588941 LRRC59Q96AG4 307 aaKnown RBP11.18□□□□□ -0.62
RDH13-211ENST00000588941 MST1RQ04912 1400 aa11.18□□□□□ -0.62
RDH13-211ENST00000588941 SPATA31A6Q5VVP1 1343 aa11.17□□□□□ -0.62
RDH13-211ENST00000588941 HRCP23327 699 aa11.17□□□□□ -0.62
RDH13-211ENST00000588941 ORAI2Q96SN7 254 aa11.17□□□□□ -0.62
RDH13-211ENST00000588941 CFAP70Q5T0N1 1121 aa11.16□□□□□ -0.62
RDH13-211ENST00000588941 POTEAQ6S8J7 498 aa11.16□□□□□ -0.62
RDH13-211ENST00000588941 KDM2AQ9Y2K7 1162 aa11.16□□□□□ -0.62
RDH13-211ENST00000588941 PTCH1Q13635 1447 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 598.5 ms