RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 SLIT1O75093 1534 aa17.41■□□□□ 0.38
RFX1-204ENST00000588885 UNC13BO14795 1591 aa17.4■□□□□ 0.38
RFX1-204ENST00000588885 STRCP1A6NGW2 1772 aa17.4■□□□□ 0.38
RFX1-204ENST00000588885 PPP1R15AO75807 674 aaPredicted RBP17.39■□□□□ 0.37
RFX1-204ENST00000588885 TET3O43151 1660 aa17.39■□□□□ 0.37
RFX1-204ENST00000588885 NAIPQ13075 1403 aa17.38■□□□□ 0.37
RFX1-204ENST00000588885 ADGRB3O60242 1522 aa17.36■□□□□ 0.37
RFX1-204ENST00000588885 KDM5AP29375 1690 aaKnown RBP17.36■□□□□ 0.37
RFX1-204ENST00000588885 HDGFP51858 240 aaKnown RBP17.35■□□□□ 0.37
RFX1-204ENST00000588885 MYO5BQ9ULV0 1848 aa17.35■□□□□ 0.37
RFX1-204ENST00000588885 IQGAP3Q86VI3 1631 aa17.34■□□□□ 0.37
RFX1-204ENST00000588885 RBM33Q96EV2 1170 aaKnown RBP17.34■□□□□ 0.37
RFX1-204ENST00000588885 RIMS2Q9UQ26 1411 aa17.34■□□□□ 0.37
RFX1-204ENST00000588885 E9PCH4 1651 aa17.32■□□□□ 0.36
RFX1-204ENST00000588885 GCC2Q8IWJ2 1684 aa17.32■□□□□ 0.36
RFX1-204ENST00000588885 KCNA6P17658 529 aa17.32■□□□□ 0.36
RFX1-204ENST00000588885 ILDR2Q71H61 639 aa17.32■□□□□ 0.36
RFX1-204ENST00000588885 LRRC7Q96NW7 1537 aa17.31■□□□□ 0.36
RFX1-204ENST00000588885 HFM1A2PYH4 1435 aa17.31■□□□□ 0.36
RFX1-204ENST00000588885 HSPA1LP34931 641 aa17.31■□□□□ 0.36
RFX1-204ENST00000588885 ZNF326Q5BKZ1 582 aaKnown RBP17.31■□□□□ 0.36
RFX1-204ENST00000588885 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.31■□□□□ 0.36
RFX1-204ENST00000588885 SLC4A1APQ9BWU0 796 aaKnown RBP17.31■□□□□ 0.36
RFX1-204ENST00000588885 ZFYVE9O95405 1425 aa17.3■□□□□ 0.36
RFX1-204ENST00000588885 PROSER2Q86WR7 435 aaPredicted RBP17.3■□□□□ 0.36
RFX1-204ENST00000588885 XIRP1Q702N8 1843 aaKnown RBP17.29■□□□□ 0.36
RFX1-204ENST00000588885 PLEKHG1Q9ULL1 1385 aa17.28■□□□□ 0.36
RFX1-204ENST00000588885 TMEM131LA2VDJ0 1609 aa17.28■□□□□ 0.36
RFX1-204ENST00000588885 MED1Q15648 1581 aaPredicted RBP17.27■□□□□ 0.35
RFX1-204ENST00000588885 TMEM94Q12767 1356 aa17.26■□□□□ 0.35
RFX1-204ENST00000588885 SOCS7O14512 581 aa17.25■□□□□ 0.35
RFX1-204ENST00000588885 TBX22Q9Y458 520 aa17.25■□□□□ 0.35
RFX1-204ENST00000588885 ALKQ9UM73 1620 aa17.21■□□□□ 0.35
RFX1-204ENST00000588885 MPHOSPH9Q99550 1183 aa17.21■□□□□ 0.35
RFX1-204ENST00000588885 C14orf37Q86TY3 774 aa17.19■□□□□ 0.34
RFX1-204ENST00000588885 ADAMTS13Q76LX8 1427 aa17.19■□□□□ 0.34
RFX1-204ENST00000588885 AMOTL2Q9Y2J4 779 aa17.18■□□□□ 0.34
RFX1-204ENST00000588885 CHD2O14647 1828 aaKnown RBP17.17■□□□□ 0.34
RFX1-204ENST00000588885 SPHKAPQ2M3C7 1700 aa17.16■□□□□ 0.34
RFX1-204ENST00000588885 SETD5Q9C0A6 1442 aa17.16■□□□□ 0.34
RFX1-204ENST00000588885 C1QBPQ07021 282 aaKnown RBP17.16■□□□□ 0.34
RFX1-204ENST00000588885 CLTCL1P53675 1640 aa17.16■□□□□ 0.34
RFX1-204ENST00000588885 TRPM2O94759 1503 aa17.16■□□□□ 0.34
RFX1-204ENST00000588885 RGL3Q3MIN7 710 aa17.15■□□□□ 0.34
RFX1-204ENST00000588885 NKTRP30414 1462 aaKnown RBP17.14■□□□□ 0.33
RFX1-204ENST00000588885 NWD1Q149M9 1564 aa17.14■□□□□ 0.33
RFX1-204ENST00000588885 ROBO1Q9Y6N7 1651 aa17.13■□□□□ 0.33
RFX1-204ENST00000588885 METP08581 1390 aa17.13■□□□□ 0.33
RFX1-204ENST00000588885 MSH6P52701 1360 aa17.13■□□□□ 0.33
RFX1-204ENST00000588885 PTPRUQ92729 1446 aa17.13■□□□□ 0.33
RFX1-204ENST00000588885 VGFO15240 615 aaPredicted RBP17.12■□□□□ 0.33
RFX1-204ENST00000588885 SLAIN2Q9P270 581 aa17.12■□□□□ 0.33
RFX1-204ENST00000588885 HOXD11P31277 338 aaPredicted RBP17.11■□□□□ 0.33
RFX1-204ENST00000588885 PIK3R4Q99570 1358 aa17.1■□□□□ 0.33
RFX1-204ENST00000588885 RAB3GAP2Q9H2M9 1393 aa17.1■□□□□ 0.33
RFX1-204ENST00000588885 PHLPP1O60346 1717 aa17.1■□□□□ 0.33
RFX1-204ENST00000588885 RPGRIP1LQ68CZ1 1315 aa17.09■□□□□ 0.33
RFX1-204ENST00000588885 KIF1BO60333 1816 aa17.09■□□□□ 0.33
RFX1-204ENST00000588885 DIP2AQ14689 1571 aa17.08■□□□□ 0.32
RFX1-204ENST00000588885 CCDC144AA2RUR9 1427 aa17.08■□□□□ 0.32
RFX1-204ENST00000588885 FAM135BQ49AJ0 1406 aa17.08■□□□□ 0.32
RFX1-204ENST00000588885 ATF3P18847 181 aa17.08■□□□□ 0.32
RFX1-204ENST00000588885 C19orf44Q9H6X5 657 aa17.08■□□□□ 0.32
RFX1-204ENST00000588885 NEXMIFQ5QGS0 1516 aa17.07■□□□□ 0.32
RFX1-204ENST00000588885 ADGRF5Q8IZF2 1346 aa17.05■□□□□ 0.32
RFX1-204ENST00000588885 SETBP1Q9Y6X0 1596 aa17.05■□□□□ 0.32
RFX1-204ENST00000588885 CADPS2Q86UW7 1296 aa17.04■□□□□ 0.32
RFX1-204ENST00000588885 NRXN3Q9Y4C0 1643 aa17.03■□□□□ 0.32
RFX1-204ENST00000588885 ACIN1Q9UKV3 1341 aaKnown RBP17.03■□□□□ 0.32
RFX1-204ENST00000588885 NCOA3Q9Y6Q9 1424 aa17.03■□□□□ 0.32
RFX1-204ENST00000588885 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.02■□□□□ 0.32
RFX1-204ENST00000588885 TRIM26Q12899 539 aaPredicted RBP17.02■□□□□ 0.32
RFX1-204ENST00000588885 STK26Q9P289 416 aa17.01■□□□□ 0.31
RFX1-204ENST00000588885 SPATA31E1Q6ZUB1 1445 aa17■□□□□ 0.31
RFX1-204ENST00000588885 TMEM132EQ6IEE7 984 aa16.98■□□□□ 0.31
RFX1-204ENST00000588885 ROBO2Q9HCK4 1378 aa16.98■□□□□ 0.31
RFX1-204ENST00000588885 BRINP3Q76B58 766 aa16.96■□□□□ 0.31
RFX1-204ENST00000588885 ANKRD30BQ9BXX2 1392 aa16.96■□□□□ 0.31
RFX1-204ENST00000588885 HRCP23327 699 aa16.95■□□□□ 0.3
RFX1-204ENST00000588885 XRN1Q8IZH2 1706 aaKnown RBP16.94■□□□□ 0.3
RFX1-204ENST00000588885 PCGF6Q9BYE7 350 aa16.94■□□□□ 0.3
RFX1-204ENST00000588885 MEX3CQ5U5Q3 659 aaKnown RBP16.93■□□□□ 0.3
RFX1-204ENST00000588885 WAPLQ7Z5K2 1190 aa16.93■□□□□ 0.3
RFX1-204ENST00000588885 DDX17Q92841 729 aaKnown RBP16.93■□□□□ 0.3
RFX1-204ENST00000588885 KDM2AQ9Y2K7 1162 aa16.93■□□□□ 0.3
RFX1-204ENST00000588885 COL16A1Q07092 1604 aaPredicted RBP16.92■□□□□ 0.3
RFX1-204ENST00000588885 JCADQ9P266 1359 aa16.92■□□□□ 0.3
RFX1-204ENST00000588885 CFAP70Q5T0N1 1121 aa16.92■□□□□ 0.3
RFX1-204ENST00000588885 ADGRL3Q9HAR2 1447 aa16.92■□□□□ 0.3
RFX1-204ENST00000588885 SETD1AO15047 1707 aaKnown RBP16.91■□□□□ 0.3
RFX1-204ENST00000588885 PPLO60437 1756 aa16.91■□□□□ 0.3
RFX1-204ENST00000588885 MST1RQ04912 1400 aa16.9■□□□□ 0.3
RFX1-204ENST00000588885 C14orf93Q9H972 538 aaKnown RBP16.9■□□□□ 0.3
RFX1-204ENST00000588885 DCCP43146 1447 aa16.89■□□□□ 0.29
RFX1-204ENST00000588885 PTCH1Q13635 1447 aa16.89■□□□□ 0.29
RFX1-204ENST00000588885 DCAF11Q8TEB1 546 aa16.89■□□□□ 0.29
RFX1-204ENST00000588885 ORAI2Q96SN7 254 aa16.89■□□□□ 0.29
RFX1-204ENST00000588885 RGS17Q9UGC6 210 aaPredicted RBP16.89■□□□□ 0.29
RFX1-204ENST00000588885 SHPRHQ149N8 1683 aa16.88■□□□□ 0.29
RFX1-204ENST00000588885 AHDC1Q5TGY3 1603 aaPredicted RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms