RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 ATF3P18847 181 aa11.92□□□□□ -0.5
TPM4-210ENST00000588507 C14orf37Q86TY3 774 aa11.92□□□□□ -0.5
TPM4-210ENST00000588507 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.91□□□□□ -0.59e-7■■□□□ 13.8
TPM4-210ENST00000588507 RTEL1-TNFRSF6BF6WH68 1400 aa11.91□□□□□ -0.5
TPM4-210ENST00000588507 PNPLA6Q8IY17 1366 aa11.91□□□□□ -0.5
TPM4-210ENST00000588507 NCOA3Q9Y6Q9 1424 aa11.9□□□□□ -0.5
TPM4-210ENST00000588507 UNC13BO14795 1591 aa11.89□□□□□ -0.51
TPM4-210ENST00000588507 GJD4Q96KN9 370 aaPredicted RBP11.89□□□□□ -0.51
TPM4-210ENST00000588507 CEP350Q5VT06 3117 aa11.88□□□□□ -0.51
TPM4-210ENST00000588507 GIGYF1O75420 1035 aaPredicted RBP11.88□□□□□ -0.51
TPM4-210ENST00000588507 C19orf44Q9H6X5 657 aa11.88□□□□□ -0.51
TPM4-210ENST00000588507 PPP1R1BQ9UD71 204 aaPredicted RBP11.88□□□□□ -0.51
TPM4-210ENST00000588507 KIAA1107Q9UPP5 1409 aa11.87□□□□□ -0.51
TPM4-210ENST00000588507 TMEM2Q9UHN6 1383 aa11.87□□□□□ -0.51
TPM4-210ENST00000588507 NINLQ9Y2I6 1382 aa11.87□□□□□ -0.51
TPM4-210ENST00000588507 ERVK-7P63135 1459 aa11.87□□□□□ -0.51
TPM4-210ENST00000588507 MAST1Q9Y2H9 1570 aa11.87□□□□□ -0.51
TPM4-210ENST00000588507 CAPN15O75808 1086 aa11.86□□□□□ -0.51
TPM4-210ENST00000588507 TET3O43151 1660 aa11.86□□□□□ -0.51
TPM4-210ENST00000588507 MROH1Q8NDA8 1641 aa11.86□□□□□ -0.51
TPM4-210ENST00000588507 PLEKHH2Q8IVE3 1493 aa11.84□□□□□ -0.51
TPM4-210ENST00000588507 CDC42BPAQ5VT25 1732 aa11.84□□□□□ -0.51
TPM4-210ENST00000588507 PTCH1Q13635 1447 aa11.84□□□□□ -0.51
TPM4-210ENST00000588507 EN1Q05925 392 aaPredicted RBP11.83□□□□□ -0.52
TPM4-210ENST00000588507 BCANQ96GW7 911 aa11.83□□□□□ -0.52
TPM4-210ENST00000588507 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.83□□□□□ -0.52
TPM4-210ENST00000588507 ARHGAP35Q9NRY4 1499 aa11.83□□□□□ -0.52
TPM4-210ENST00000588507 ASXL1Q8IXJ9 1541 aa11.82□□□□□ -0.52
TPM4-210ENST00000588507 STAG3Q9UJ98 1225 aa11.82□□□□□ -0.52
TPM4-210ENST00000588507 GPATCH8Q9UKJ3 1502 aaKnown RBP11.81□□□□□ -0.52
TPM4-210ENST00000588507 RALGAPBQ86X10 1494 aa11.81□□□□□ -0.52
TPM4-210ENST00000588507 FMN1Q68DA7 1419 aa11.8□□□□□ -0.52
TPM4-210ENST00000588507 SPON1Q9HCB6 807 aa11.8□□□□□ -0.52
TPM4-210ENST00000588507 CAMSAP2Q08AD1 1489 aa11.8□□□□□ -0.52
TPM4-210ENST00000588507 CAMTA1Q9Y6Y1 1673 aa11.8□□□□□ -0.52
TPM4-210ENST00000588507 SPHKAPQ2M3C7 1700 aa11.8□□□□□ -0.52
TPM4-210ENST00000588507 PRELPP51888 382 aa11.79□□□□□ -0.52
TPM4-210ENST00000588507 PPP1R15AO75807 674 aaPredicted RBP11.78□□□□□ -0.52
TPM4-210ENST00000588507 SEPT12Q8IYM1 358 aa11.78□□□□□ -0.52
TPM4-210ENST00000588507 DDX17Q92841 729 aaKnown RBP11.78□□□□□ -0.52
TPM4-210ENST00000588507 CFDP1Q9UEE9 299 aaPredicted RBP11.78□□□□□ -0.52
TPM4-210ENST00000588507 BRWD3Q6RI45 1802 aa11.78□□□□□ -0.52
TPM4-210ENST00000588507 CHD2O14647 1828 aaKnown RBP11.77□□□□□ -0.52
TPM4-210ENST00000588507 KRT27Q7Z3Y8 459 aa11.77□□□□□ -0.53
TPM4-210ENST00000588507 CFAP65Q6ZU64 1925 aaKnown RBP11.77□□□□□ -0.53
TPM4-210ENST00000588507 CHD4Q14839 1912 aa11.76□□□□□ -0.53
TPM4-210ENST00000588507 KCNQ2O43526 872 aa11.75□□□□□ -0.53
TPM4-210ENST00000588507 GLI3P10071 1580 aa11.73□□□□□ -0.53
TPM4-210ENST00000588507 EZH2Q15910 746 aaKnown RBP11.73□□□□□ -0.53
TPM4-210ENST00000588507 PIK3C2BO00750 1634 aa11.72□□□□□ -0.53
TPM4-210ENST00000588507 EFCAB6Q5THR3 1501 aa11.72□□□□□ -0.53
TPM4-210ENST00000588507 DCCP43146 1447 aa11.72□□□□□ -0.53
TPM4-210ENST00000588507 UNC5CLQ8IV45 518 aa11.72□□□□□ -0.53
TPM4-210ENST00000588507 CSRNP3Q8WYN3 585 aa11.72□□□□□ -0.53
TPM4-210ENST00000588507 MST1RQ04912 1400 aa11.71□□□□□ -0.53
TPM4-210ENST00000588507 HSPA6P17066 643 aa11.71□□□□□ -0.53
TPM4-210ENST00000588507 TBX22Q9Y458 520 aa11.7□□□□□ -0.54
TPM4-210ENST00000588507 DISP2A7MBM2 1401 aa11.69□□□□□ -0.54
TPM4-210ENST00000588507 ONECUT3O60422 494 aaPredicted RBP11.69□□□□□ -0.54
TPM4-210ENST00000588507 COL13A1Q5TAT6 717 aaPredicted RBP11.69□□□□□ -0.54
TPM4-210ENST00000588507 LRRIQ1Q96JM4 1722 aa11.69□□□□□ -0.54
TPM4-210ENST00000588507 NBPF8Q3BBV2 869 aa11.68□□□□□ -0.54
TPM4-210ENST00000588507 NBPF14Q5TI25 921 aa11.68□□□□□ -0.54
TPM4-210ENST00000588507 TNS4Q8IZW8 715 aa11.68□□□□□ -0.54
TPM4-210ENST00000588507 CAMKK2Q96RR4 588 aa11.68□□□□□ -0.54
TPM4-210ENST00000588507 MBD5Q9P267 1494 aa11.68□□□□□ -0.54
TPM4-210ENST00000588507 RGPD1P0DJD0 1748 aa11.67□□□□□ -0.54
TPM4-210ENST00000588507 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.67□□□□□ -0.54
TPM4-210ENST00000588507 IDI1Q13907 227 aa11.67□□□□□ -0.54
TPM4-210ENST00000588507 SOS2Q07890 1332 aaPredicted RBP11.66□□□□□ -0.54
TPM4-210ENST00000588507 ZNF644Q9H582 1327 aaPredicted RBP11.66□□□□□ -0.54
TPM4-210ENST00000588507 PLEKHG1Q9ULL1 1385 aa11.66□□□□□ -0.54
TPM4-210ENST00000588507 UTRNP46939 3433 aa11.66□□□□□ -0.54
TPM4-210ENST00000588507 FAM83GA6ND36 823 aa11.65□□□□□ -0.54
TPM4-210ENST00000588507 CCNB3Q8WWL7 1395 aa11.65□□□□□ -0.55
TPM4-210ENST00000588507 MYOM2P54296 1465 aa11.64□□□□□ -0.55
TPM4-210ENST00000588507 CCDC18Q5T9S5 1454 aa11.64□□□□□ -0.55
TPM4-210ENST00000588507 ARHGAP31Q2M1Z3 1444 aa11.64□□□□□ -0.55
TPM4-210ENST00000588507 A0A0G2JS52 829 aa11.63□□□□□ -0.55
TPM4-210ENST00000588507 MYT1Q01538 1121 aa11.63□□□□□ -0.55
TPM4-210ENST00000588507 VPS72Q15906 364 aa11.63□□□□□ -0.55
TPM4-210ENST00000588507 COL22A1Q8NFW1 1626 aaPredicted RBP11.63□□□□□ -0.55
TPM4-210ENST00000588507 PARD3Q8TEW0 1356 aa11.63□□□□□ -0.55
TPM4-210ENST00000588507 SLIT2O94813 1529 aa11.62□□□□□ -0.55
TPM4-210ENST00000588507 HDGFP51858 240 aaKnown RBP11.62□□□□□ -0.55
TPM4-210ENST00000588507 MARF1Q9Y4F3 1742 aaKnown RBP11.62□□□□□ -0.55
TPM4-210ENST00000588507 PIK3R4Q99570 1358 aa11.62□□□□□ -0.55
TPM4-210ENST00000588507 AMOTL2Q9Y2J4 779 aa11.61□□□□□ -0.55
TPM4-210ENST00000588507 CCDC9Q9Y3X0 531 aaKnown RBP11.61□□□□□ -0.55
TPM4-210ENST00000588507 CEP152O94986 1710 aa11.6□□□□□ -0.55
TPM4-210ENST00000588507 SYT17Q9BSW7 474 aa11.6□□□□□ -0.55
TPM4-210ENST00000588507 MTUS2Q5JR59 1369 aa11.59□□□□□ -0.55
TPM4-210ENST00000588507 RSPH4AQ5TD94 716 aa11.59□□□□□ -0.55
TPM4-210ENST00000588507 RPRD2Q5VT52 1461 aaKnown RBP11.58□□□□□ -0.56
TPM4-210ENST00000588507 LAMC1P11047 1609 aa11.58□□□□□ -0.56
TPM4-210ENST00000588507 APBA3O96018 575 aa11.58□□□□□ -0.56
TPM4-210ENST00000588507 FAM182BQ5T319 152 aa11.58□□□□□ -0.56
TPM4-210ENST00000588507 CCDC141Q6ZP82 1450 aa11.57□□□□□ -0.56
TPM4-210ENST00000588507 ADGRB3O60242 1522 aa11.57□□□□□ -0.56
TPM4-210ENST00000588507 TNS1Q9HBL0 1735 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms