RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 PRAG1Q86YV5 1406 aa14.76□□□□□ -0.05
CHMP1B-202ENST00000588284 RNF39Q9H2S5 420 aa14.76□□□□□ -0.05
CHMP1B-202ENST00000588284 RALGAPBQ86X10 1494 aa14.76□□□□□ -0.05
CHMP1B-202ENST00000588284 SIGLEC1Q9BZZ2 1709 aa14.75□□□□□ -0.05
CHMP1B-202ENST00000588284 CLTCQ00610 1675 aaKnown RBP14.75□□□□□ -0.05
CHMP1B-202ENST00000588284 VGFO15240 615 aaPredicted RBP14.75□□□□□ -0.05
CHMP1B-202ENST00000588284 ERVK-7P63135 1459 aa14.75□□□□□ -0.05
CHMP1B-202ENST00000588284 STAG3Q9UJ98 1225 aa14.74□□□□□ -0.05
CHMP1B-202ENST00000588284 ROCK2O75116 1388 aaKnown RBP14.73□□□□□ -0.05
CHMP1B-202ENST00000588284 PREX1Q8TCU6 1659 aa14.73□□□□□ -0.05
CHMP1B-202ENST00000588284 UGGT1Q9NYU2 1555 aa14.73□□□□□ -0.05
CHMP1B-202ENST00000588284 HDGFP51858 240 aaKnown RBP14.72□□□□□ -0.05
CHMP1B-202ENST00000588284 PIK3C2BO00750 1634 aa14.72□□□□□ -0.05
CHMP1B-202ENST00000588284 SYNMO15061 1565 aa14.72□□□□□ -0.05
CHMP1B-202ENST00000588284 HIRIP3Q9BW71 556 aaPredicted RBP14.71□□□□□ -0.05
CHMP1B-202ENST00000588284 SPATA31D1Q6ZQQ2 1576 aa14.71□□□□□ -0.05
CHMP1B-202ENST00000588284 GPRASP1Q5JY77 1395 aa14.71□□□□□ -0.06
CHMP1B-202ENST00000588284 ADGRB3O60242 1522 aa14.71□□□□□ -0.06
CHMP1B-202ENST00000588284 MYOM2P54296 1465 aa14.7□□□□□ -0.06
CHMP1B-202ENST00000588284 MROH2AA6NES4 1674 aa14.69□□□□□ -0.06
CHMP1B-202ENST00000588284 NBPF1Q3BBV0 1214 aa14.69□□□□□ -0.06
CHMP1B-202ENST00000588284 TNRQ92752 1358 aa14.69□□□□□ -0.06
CHMP1B-202ENST00000588284 USP47Q96K76 1375 aa14.69□□□□□ -0.06
CHMP1B-202ENST00000588284 ADGRF5Q8IZF2 1346 aa14.67□□□□□ -0.06
CHMP1B-202ENST00000588284 ZFYVE9O95405 1425 aa14.67□□□□□ -0.06
CHMP1B-202ENST00000588284 SLC24A1O60721 1099 aa14.67□□□□□ -0.06
CHMP1B-202ENST00000588284 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.67□□□□□ -0.06
CHMP1B-202ENST00000588284 TRPM1Q7Z4N2 1603 aa14.66□□□□□ -0.06
CHMP1B-202ENST00000588284 C14orf93Q9H972 538 aaKnown RBP14.66□□□□□ -0.06
CHMP1B-202ENST00000588284 CACNB1Q02641 598 aaPredicted RBP14.65□□□□□ -0.06
CHMP1B-202ENST00000588284 NRXN1Q9ULB1 1477 aa14.64□□□□□ -0.07
CHMP1B-202ENST00000588284 LAMC1P11047 1609 aa14.64□□□□□ -0.07
CHMP1B-202ENST00000588284 MADDQ8WXG6 1647 aa14.64□□□□□ -0.07
CHMP1B-202ENST00000588284 ST20-MTHFSA0A0A6YYL1 179 aa14.64□□□□□ -0.07
CHMP1B-202ENST00000588284 DDX10Q13206 875 aaKnown RBP14.64□□□□□ -0.07
CHMP1B-202ENST00000588284 CFAP70Q5T0N1 1121 aa14.64□□□□□ -0.07
CHMP1B-202ENST00000588284 SAMD1Q6SPF0 538 aaPredicted RBP14.64□□□□□ -0.07
CHMP1B-202ENST00000588284 KIAA1210Q9ULL0 1709 aa14.63□□□□□ -0.07
CHMP1B-202ENST00000588284 TMEM131LA2VDJ0 1609 aa14.63□□□□□ -0.07
CHMP1B-202ENST00000588284 CEBPAP49715 358 aaPredicted RBP14.63□□□□□ -0.07
CHMP1B-202ENST00000588284 NLRP1Q9C000 1473 aa14.63□□□□□ -0.07
CHMP1B-202ENST00000588284 C1QBPQ07021 282 aaKnown RBP14.62□□□□□ -0.07
CHMP1B-202ENST00000588284 IFT172Q9UG01 1749 aa14.62□□□□□ -0.07
CHMP1B-202ENST00000588284 PPLO60437 1756 aa14.62□□□□□ -0.07
CHMP1B-202ENST00000588284 A2ML1A8K2U0 1454 aa14.61□□□□□ -0.07
CHMP1B-202ENST00000588284 FER1L4A9Z1Z3 1794 aa14.6□□□□□ -0.07
CHMP1B-202ENST00000588284 NEXMIFQ5QGS0 1516 aa14.6□□□□□ -0.07
CHMP1B-202ENST00000588284 WASHC2AQ641Q2 1341 aa14.6□□□□□ -0.07
CHMP1B-202ENST00000588284 EIF3AQ14152 1382 aaKnown RBP14.6□□□□□ -0.07
CHMP1B-202ENST00000588284 CCDC7Q96M83 1385 aa14.6□□□□□ -0.07
CHMP1B-202ENST00000588284 PIK3C2GO75747 1445 aa14.59□□□□□ -0.07
CHMP1B-202ENST00000588284 SCAF11Q99590 1463 aaKnown RBP14.59□□□□□ -0.07
CHMP1B-202ENST00000588284 THEMISQ8N1K5 641 aaPredicted RBP14.59□□□□□ -0.07
CHMP1B-202ENST00000588284 RIMS2Q9UQ26 1411 aa14.58□□□□□ -0.07
CHMP1B-202ENST00000588284 NUTM2DQ5VT03 806 aaPredicted RBP14.58□□□□□ -0.08
CHMP1B-202ENST00000588284 C11orf95C9JLR9 678 aaPredicted RBP14.57□□□□□ -0.08
CHMP1B-202ENST00000588284 TMF1P82094 1093 aa14.57□□□□□ -0.08
CHMP1B-202ENST00000588284 CDCA8Q53HL2 280 aa14.57□□□□□ -0.08
CHMP1B-202ENST00000588284 C3P01024 1663 aa14.57□□□□□ -0.08
CHMP1B-202ENST00000588284 KDM5AP29375 1690 aaKnown RBP14.57□□□□□ -0.08
CHMP1B-202ENST00000588284 SETBP1Q9Y6X0 1596 aa14.56□□□□□ -0.08
CHMP1B-202ENST00000588284 EID1Q9Y6B2 187 aa14.56□□□□□ -0.08
CHMP1B-202ENST00000588284 KIF7Q2M1P5 1343 aa14.56□□□□□ -0.08
CHMP1B-202ENST00000588284 ADAMTSL3P82987 1691 aa14.55□□□□□ -0.08
CHMP1B-202ENST00000588284 TMEM2Q9UHN6 1383 aa14.55□□□□□ -0.08
CHMP1B-202ENST00000588284 TESK2Q96S53 571 aa14.54□□□□□ -0.08
CHMP1B-202ENST00000588284 MYO5BQ9ULV0 1848 aa14.53□□□□□ -0.08
CHMP1B-202ENST00000588284 MIER1Q8N108 512 aa14.53□□□□□ -0.08
CHMP1B-202ENST00000588284 ANP32CO43423 234 aa14.52□□□□□ -0.09
CHMP1B-202ENST00000588284 TMEM132EQ6IEE7 984 aa14.52□□□□□ -0.09
CHMP1B-202ENST00000588284 TXNDC2Q86VQ3 553 aa14.52□□□□□ -0.09
CHMP1B-202ENST00000588284 FBXO41Q8TF61 875 aa14.52□□□□□ -0.09
CHMP1B-202ENST00000588284 ATXN8OSP0DMR3 200 aa14.51□□□□□ -0.09
CHMP1B-202ENST00000588284 BCANQ96GW7 911 aa14.51□□□□□ -0.09
CHMP1B-202ENST00000588284 POLR3GLQ9BT43 218 aa14.51□□□□□ -0.09
CHMP1B-202ENST00000588284 TRAK1Q9UPV9 953 aa14.51□□□□□ -0.09
CHMP1B-202ENST00000588284 RIMS1Q86UR5 1692 aaKnown RBP14.51□□□□□ -0.09
CHMP1B-202ENST00000588284 CENPJQ9HC77 1338 aaPredicted RBP14.5□□□□□ -0.09
CHMP1B-202ENST00000588284 IQGAP1P46940 1657 aa14.5□□□□□ -0.09
CHMP1B-202ENST00000588284 UBR1Q8IWV7 1749 aa14.49□□□□□ -0.09
CHMP1B-202ENST00000588284 SETD1BQ9UPS6 1966 aaKnown RBP14.49□□□□□ -0.09
CHMP1B-202ENST00000588284 POLR1AO95602 1720 aaPredicted RBP14.49□□□□□ -0.09
CHMP1B-202ENST00000588284 ADGRB1O14514 1584 aa14.48□□□□□ -0.09
CHMP1B-202ENST00000588284 SBNO2Q9Y2G9 1366 aa14.47□□□□□ -0.09
CHMP1B-202ENST00000588284 SIRT1Q96EB6 747 aa14.47□□□□□ -0.09
CHMP1B-202ENST00000588284 PUS7Q96PZ0 661 aaKnown RBP14.47□□□□□ -0.09
CHMP1B-202ENST00000588284 ALKQ9UM73 1620 aa14.47□□□□□ -0.09
CHMP1B-202ENST00000588284 PLEKHG1Q9ULL1 1385 aa14.47□□□□□ -0.09
CHMP1B-202ENST00000588284 SLIT1O75093 1534 aa14.46□□□□□ -0.09
CHMP1B-202ENST00000588284 ARHGAP23Q9P227 1491 aa14.46□□□□□ -0.09
CHMP1B-202ENST00000588284 LTKP29376 864 aa14.46□□□□□ -0.09
CHMP1B-202ENST00000588284 STK26Q9P289 416 aa14.46□□□□□ -0.09
CHMP1B-202ENST00000588284 ANKLE2Q86XL3 938 aa14.45□□□□□ -0.1
CHMP1B-202ENST00000588284 YTHDC2Q9H6S0 1430 aaKnown RBP14.45□□□□□ -0.1
CHMP1B-202ENST00000588284 POGKQ9P215 609 aa14.45□□□□□ -0.1
CHMP1B-202ENST00000588284 TBX22Q9Y458 520 aa14.45□□□□□ -0.1
CHMP1B-202ENST00000588284 LRPPRCP42704 1394 aaKnown RBP14.45□□□□□ -0.1
CHMP1B-202ENST00000588284 PTPRMP28827 1452 aa14.44□□□□□ -0.1
CHMP1B-202ENST00000588284 ABCC11Q96J66 1382 aa14.44□□□□□ -0.1
CHMP1B-202ENST00000588284 DISP3Q9P2K9 1392 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms