RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 KIF13AQ9H1H9 1805 aa13.17□□□□□ -0.3
LINC01539-201ENST00000587904 NPATQ14207 1427 aa13.17□□□□□ -0.3
LINC01539-201ENST00000587904 ARHGAP31Q2M1Z3 1444 aa13.17□□□□□ -0.3
LINC01539-201ENST00000587904 ADGRB3O60242 1522 aa13.17□□□□□ -0.3
LINC01539-201ENST00000587904 IFT172Q9UG01 1749 aa13.17□□□□□ -0.3
LINC01539-201ENST00000587904 CCDC136Q96JN2 1154 aa13.16□□□□□ -0.3
LINC01539-201ENST00000587904 YEATS2Q9ULM3 1422 aa13.16□□□□□ -0.3
LINC01539-201ENST00000587904 TSPOAP1O95153 1857 aa13.16□□□□□ -0.3
LINC01539-201ENST00000587904 AGLP35573 1532 aa13.15□□□□□ -0.3
LINC01539-201ENST00000587904 IQGAP1P46940 1657 aa13.14□□□□□ -0.31
LINC01539-201ENST00000587904 WASHC2CQ9Y4E1 1318 aa13.14□□□□□ -0.31
LINC01539-201ENST00000587904 UGGT1Q9NYU2 1555 aa13.14□□□□□ -0.31
LINC01539-201ENST00000587904 NOS1P29475 1434 aa13.13□□□□□ -0.31
LINC01539-201ENST00000587904 GGT6Q6P531 493 aa13.13□□□□□ -0.31
LINC01539-201ENST00000587904 MROH2AA6NES4 1674 aa13.13□□□□□ -0.31
LINC01539-201ENST00000587904 PIK3C2BO00750 1634 aa13.13□□□□□ -0.31
LINC01539-201ENST00000587904 ST20-MTHFSA0A0A6YYL1 179 aa13.12□□□□□ -0.31
LINC01539-201ENST00000587904 PODXL2Q9NZ53 605 aa13.12□□□□□ -0.31
LINC01539-201ENST00000587904 NRXN1Q9ULB1 1477 aa13.12□□□□□ -0.31
LINC01539-201ENST00000587904 COL17A1Q9UMD9 1497 aaPredicted RBP13.11□□□□□ -0.31
LINC01539-201ENST00000587904 ARHGEF40Q8TER5 1519 aa13.11□□□□□ -0.31
LINC01539-201ENST00000587904 NBPF1Q3BBV0 1214 aa13.1□□□□□ -0.31
LINC01539-201ENST00000587904 SCAF11Q99590 1463 aaKnown RBP13.1□□□□□ -0.31
LINC01539-201ENST00000587904 PPP6R1Q9UPN7 881 aa13.09□□□□□ -0.31
LINC01539-201ENST00000587904 SIGLEC1Q9BZZ2 1709 aa13.09□□□□□ -0.31
LINC01539-201ENST00000587904 SYNMO15061 1565 aa13.09□□□□□ -0.31
LINC01539-201ENST00000587904 PPLO60437 1756 aa13.09□□□□□ -0.31
LINC01539-201ENST00000587904 EIF3AQ14152 1382 aaKnown RBP13.08□□□□□ -0.32
LINC01539-201ENST00000587904 PLEKHG5O94827 1062 aa13.08□□□□□ -0.32
LINC01539-201ENST00000587904 PRKRIP1Q9H875 184 aaPredicted RBP13.08□□□□□ -0.32
LINC01539-201ENST00000587904 RPGRIP1LQ68CZ1 1315 aa13.08□□□□□ -0.32
LINC01539-201ENST00000587904 PREX1Q8TCU6 1659 aa13.07□□□□□ -0.32
LINC01539-201ENST00000587904 SETBP1Q9Y6X0 1596 aa13.07□□□□□ -0.32
LINC01539-201ENST00000587904 KTN1Q86UP2 1357 aaKnown RBP13.06□□□□□ -0.32
LINC01539-201ENST00000587904 SENP3Q9H4L4 574 aaPredicted RBP13.06□□□□□ -0.32
LINC01539-201ENST00000587904 TESK2Q96S53 571 aa13.05□□□□□ -0.32
LINC01539-201ENST00000587904 TMF1P82094 1093 aa13.04□□□□□ -0.32
LINC01539-201ENST00000587904 MYO3AQ8NEV4 1616 aa13.04□□□□□ -0.32
LINC01539-201ENST00000587904 PIK3C2GO75747 1445 aa13.04□□□□□ -0.32
LINC01539-201ENST00000587904 SLC52A1Q9NWF4 448 aa13.03□□□□□ -0.32
LINC01539-201ENST00000587904 POLR3GLQ9BT43 218 aa13.02□□□□□ -0.33
LINC01539-201ENST00000587904 CFAP65Q6ZU64 1925 aaKnown RBP13.02□□□□□ -0.33
LINC01539-201ENST00000587904 NEXMIFQ5QGS0 1516 aa13.02□□□□□ -0.33
LINC01539-201ENST00000587904 CDCA8Q53HL2 280 aa13.01□□□□□ -0.33
LINC01539-201ENST00000587904 DISP3Q9P2K9 1392 aa13.01□□□□□ -0.33
LINC01539-201ENST00000587904 ERVK-7P63135 1459 aa13.01□□□□□ -0.33
LINC01539-201ENST00000587904 ADGRF5Q8IZF2 1346 aa13.01□□□□□ -0.33
LINC01539-201ENST00000587904 ZFYVE9O95405 1425 aa13.01□□□□□ -0.33
LINC01539-201ENST00000587904 FKBP8Q14318 412 aa13□□□□□ -0.33
LINC01539-201ENST00000587904 CLTCQ00610 1675 aaKnown RBP13□□□□□ -0.33
LINC01539-201ENST00000587904 SBNO2Q9Y2G9 1366 aa13□□□□□ -0.33
LINC01539-201ENST00000587904 ZBTB4Q9P1Z0 1013 aaPredicted RBP13□□□□□ -0.33
LINC01539-201ENST00000587904 TMEM131LA2VDJ0 1609 aa12.99□□□□□ -0.33
LINC01539-201ENST00000587904 SPATA31D1Q6ZQQ2 1576 aa12.99□□□□□ -0.33
LINC01539-201ENST00000587904 CHGAP10645 457 aaKnown RBP12.99□□□□□ -0.33
LINC01539-201ENST00000587904 ADGRB1O14514 1584 aa12.98□□□□□ -0.33
LINC01539-201ENST00000587904 NEFLP07196 543 aa12.98□□□□□ -0.33
LINC01539-201ENST00000587904 KDM5AP29375 1690 aaKnown RBP12.97□□□□□ -0.33
LINC01539-201ENST00000587904 RALBP1Q15311 655 aa12.97□□□□□ -0.33
LINC01539-201ENST00000587904 BCANQ96GW7 911 aa12.97□□□□□ -0.33
LINC01539-201ENST00000587904 VGFO15240 615 aaPredicted RBP12.97□□□□□ -0.33
LINC01539-201ENST00000587904 CFAP70Q5T0N1 1121 aa12.97□□□□□ -0.33
LINC01539-201ENST00000587904 C14orf93Q9H972 538 aaKnown RBP12.97□□□□□ -0.33
LINC01539-201ENST00000587904 MRS2Q9HD23 443 aa12.97□□□□□ -0.33
LINC01539-201ENST00000587904 GLIPR1L2Q4G1C9 344 aa12.96□□□□□ -0.33
LINC01539-201ENST00000587904 IDI1Q13907 227 aa12.95□□□□□ -0.34
LINC01539-201ENST00000587904 IL27Q8NEV9 243 aa12.94□□□□□ -0.34
LINC01539-201ENST00000587904 MYO5BQ9ULV0 1848 aa12.93□□□□□ -0.34
LINC01539-201ENST00000587904 PARD3Q8TEW0 1356 aa12.93□□□□□ -0.34
LINC01539-201ENST00000587904 MYOM1P52179 1685 aa12.93□□□□□ -0.34
LINC01539-201ENST00000587904 MYBBP1AQ9BQG0 1328 aaKnown RBP12.93□□□□□ -0.34
LINC01539-201ENST00000587904 BRD4O60885 1362 aaPredicted RBP12.93□□□□□ -0.34
LINC01539-201ENST00000587904 PER1O15534 1290 aaPredicted RBP12.92□□□□□ -0.34
LINC01539-201ENST00000587904 QRICH2Q9H0J4 1663 aa12.92□□□□□ -0.34
LINC01539-201ENST00000587904 CENPJQ9HC77 1338 aaPredicted RBP12.91□□□□□ -0.34
LINC01539-201ENST00000587904 CCDC184Q52MB2 194 aa12.9□□□□□ -0.34
LINC01539-201ENST00000587904 ARHGEF28Q8N1W1 1705 aaKnown RBP12.9□□□□□ -0.34
LINC01539-201ENST00000587904 HNRNPUQ00839 825 aaKnown RBP eCLIP12.9□□□□□ -0.34
LINC01539-201ENST00000587904 ESF1Q9H501 851 aaKnown RBP12.89□□□□□ -0.35
LINC01539-201ENST00000587904 PANK3Q9H999 370 aa12.89□□□□□ -0.35
LINC01539-201ENST00000587904 A2ML1A8K2U0 1454 aa12.89□□□□□ -0.35
LINC01539-201ENST00000587904 FBXO31Q5XUX0 539 aaPredicted RBP12.89□□□□□ -0.35
LINC01539-201ENST00000587904 NPC1L1Q9UHC9 1359 aa12.88□□□□□ -0.35
LINC01539-201ENST00000587904 NLRP13Q86W25 1043 aa12.88□□□□□ -0.35
LINC01539-201ENST00000587904 NOP58Q9Y2X3 529 aaKnown RBP12.87□□□□□ -0.35
LINC01539-201ENST00000587904 ASXL1Q8IXJ9 1541 aa12.87□□□□□ -0.35
LINC01539-201ENST00000587904 RTL5Q5HYW3 569 aaPredicted RBP12.87□□□□□ -0.35
LINC01539-201ENST00000587904 ZBED9Q6R2W3 1325 aa12.87□□□□□ -0.35
LINC01539-201ENST00000587904 ZMYM3Q14202 1370 aa12.87□□□□□ -0.35
LINC01539-201ENST00000587904 FAM9BQ8IZU0 186 aa12.86□□□□□ -0.35
LINC01539-201ENST00000587904 TMC1Q8TDI8 760 aa12.86□□□□□ -0.35
LINC01539-201ENST00000587904 PUS7Q96PZ0 661 aaKnown RBP12.86□□□□□ -0.35
LINC01539-201ENST00000587904 STAG3Q9UJ98 1225 aa12.85□□□□□ -0.35
LINC01539-201ENST00000587904 INSRP06213 1382 aa12.85□□□□□ -0.35
LINC01539-201ENST00000587904 LRPPRCP42704 1394 aaKnown RBP12.85□□□□□ -0.35
LINC01539-201ENST00000587904 MLECQ14165 292 aa12.85□□□□□ -0.35
LINC01539-201ENST00000587904 RSPH6AQ9H0K4 717 aa12.85□□□□□ -0.35
LINC01539-201ENST00000587904 KNSTRNQ9Y448 316 aa12.85□□□□□ -0.35
LINC01539-201ENST00000587904 ALKQ9UM73 1620 aa12.84□□□□□ -0.35
LINC01539-201ENST00000587904 TRAK1Q9UPV9 953 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms