RNA–Protein interactions for RNA: ENST00000586667.1

DNMT1-208, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 714 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-208ENST00000586667 SCAF11Q99590 1463 aaKnown RBP18.3■□□□□ 0.52
DNMT1-208ENST00000586667 STRCQ7RTU9 1775 aa18.3■□□□□ 0.52
DNMT1-208ENST00000586667 SETBP1Q9Y6X0 1596 aa18.29■□□□□ 0.52
DNMT1-208ENST00000586667 SETD1AO15047 1707 aaKnown RBP18.29■□□□□ 0.52
DNMT1-208ENST00000586667 IQGAP1P46940 1657 aa18.28■□□□□ 0.52
DNMT1-208ENST00000586667 L3MBTL2Q969R5 705 aa18.28■□□□□ 0.52
DNMT1-208ENST00000586667 PIK3C2GO75747 1445 aa18.28■□□□□ 0.52
DNMT1-208ENST00000586667 TONSLQ96HA7 1378 aa18.28■□□□□ 0.52
DNMT1-208ENST00000586667 RGL3Q3MIN7 710 aa18.27■□□□□ 0.52
DNMT1-208ENST00000586667 THEMISQ8N1K5 641 aaPredicted RBP18.27■□□□□ 0.52
DNMT1-208ENST00000586667 MED14O60244 1454 aa18.26■□□□□ 0.51
DNMT1-208ENST00000586667 RPGRIP1LQ68CZ1 1315 aa18.26■□□□□ 0.51
DNMT1-208ENST00000586667 PRAG1Q86YV5 1406 aa18.26■□□□□ 0.51
DNMT1-208ENST00000586667 LTKP29376 864 aa18.26■□□□□ 0.51
DNMT1-208ENST00000586667 HSPA2P54652 639 aa18.26■□□□□ 0.51
DNMT1-208ENST00000586667 STAG3Q9UJ98 1225 aa18.26■□□□□ 0.51
DNMT1-208ENST00000586667 ASXL1Q8IXJ9 1541 aa18.24■□□□□ 0.51
DNMT1-208ENST00000586667 ZNF326Q5BKZ1 582 aaKnown RBP18.24■□□□□ 0.51
DNMT1-208ENST00000586667 ADGRF5Q8IZF2 1346 aa18.23■□□□□ 0.51
DNMT1-208ENST00000586667 PLEKHG1Q9ULL1 1385 aa18.23■□□□□ 0.51
DNMT1-208ENST00000586667 ADAMTS13Q76LX8 1427 aa18.23■□□□□ 0.51
DNMT1-208ENST00000586667 LAMC1P11047 1609 aa18.22■□□□□ 0.51
DNMT1-208ENST00000586667 TRPM1Q7Z4N2 1603 aa18.22■□□□□ 0.51
DNMT1-208ENST00000586667 NUTM2DQ5VT03 806 aaPredicted RBP18.21■□□□□ 0.51
DNMT1-208ENST00000586667 DCAF11Q8TEB1 546 aa18.21■□□□□ 0.51
DNMT1-208ENST00000586667 TIMELESSQ9UNS1 1208 aa18.21■□□□□ 0.51
DNMT1-208ENST00000586667 KIAA1210Q9ULL0 1709 aa18.2■□□□□ 0.5
DNMT1-208ENST00000586667 DIP2AQ14689 1571 aa18.2■□□□□ 0.5
DNMT1-208ENST00000586667 ADGRB1O14514 1584 aa18.19■□□□□ 0.5
DNMT1-208ENST00000586667 NPHP4O75161 1426 aaPredicted RBP18.19■□□□□ 0.5
DNMT1-208ENST00000586667 ALKQ9UM73 1620 aa18.19■□□□□ 0.5
DNMT1-208ENST00000586667 TXNDC2Q86VQ3 553 aa18.18■□□□□ 0.5
DNMT1-208ENST00000586667 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.18■□□□□ 0.5
DNMT1-208ENST00000586667 RALGAPBQ86X10 1494 aa18.18■□□□□ 0.5
DNMT1-208ENST00000586667 NCKAP5LQ9HCH0 1330 aa18.17■□□□□ 0.5
DNMT1-208ENST00000586667 NBPF8Q3BBV2 869 aa18.16■□□□□ 0.5
DNMT1-208ENST00000586667 ANKLE2Q86XL3 938 aa18.16■□□□□ 0.5
DNMT1-208ENST00000586667 VGFO15240 615 aaPredicted RBP18.15■□□□□ 0.5
DNMT1-208ENST00000586667 STAC3Q96MF2 364 aa18.15■□□□□ 0.5
DNMT1-208ENST00000586667 KDM2AQ9Y2K7 1162 aa18.15■□□□□ 0.5
DNMT1-208ENST00000586667 EID1Q9Y6B2 187 aa18.15■□□□□ 0.5
DNMT1-208ENST00000586667 PPP1R15AO75807 674 aaPredicted RBP18.14■□□□□ 0.49
DNMT1-208ENST00000586667 XRN1Q8IZH2 1706 aaKnown RBP18.13■□□□□ 0.49
DNMT1-208ENST00000586667 NWD1Q149M9 1564 aa18.13■□□□□ 0.49
DNMT1-208ENST00000586667 AEBP2Q6ZN18 517 aaPredicted RBP18.12■□□□□ 0.49
DNMT1-208ENST00000586667 GPRASP1Q5JY77 1395 aa18.11■□□□□ 0.49
DNMT1-208ENST00000586667 METP08581 1390 aa18.1■□□□□ 0.49
DNMT1-208ENST00000586667 HDGFP51858 240 aaKnown RBP18.1■□□□□ 0.49
DNMT1-208ENST00000586667 SENP3Q9H4L4 574 aaPredicted RBP18.1■□□□□ 0.49
DNMT1-208ENST00000586667 KNDC1Q76NI1 1749 aa18.09■□□□□ 0.49
DNMT1-208ENST00000586667 C14orf93Q9H972 538 aaKnown RBP18.09■□□□□ 0.49
DNMT1-208ENST00000586667 PTPRUQ92729 1446 aa18.08■□□□□ 0.49
DNMT1-208ENST00000586667 CFAP70Q5T0N1 1121 aa18.08■□□□□ 0.48
DNMT1-208ENST00000586667 STRCP1A6NGW2 1772 aa18.08■□□□□ 0.48
DNMT1-208ENST00000586667 SLC26A8Q96RN1 970 aa18.07■□□□□ 0.48
DNMT1-208ENST00000586667 CHD2O14647 1828 aaKnown RBP18.07■□□□□ 0.48
DNMT1-208ENST00000586667 CPS1P31327 1500 aa18.06■□□□□ 0.48
DNMT1-208ENST00000586667 ARHGEF28Q8N1W1 1705 aaKnown RBP18.06■□□□□ 0.48
DNMT1-208ENST00000586667 TECPR2O15040 1411 aa18.06■□□□□ 0.48
DNMT1-208ENST00000586667 NBPF1Q3BBV0 1214 aa18.05■□□□□ 0.48
DNMT1-208ENST00000586667 TBX22Q9Y458 520 aa18.05■□□□□ 0.48
DNMT1-208ENST00000586667 PIK3R4Q99570 1358 aa18.04■□□□□ 0.48
DNMT1-208ENST00000586667 YTHDC2Q9H6S0 1430 aaKnown RBP18.04■□□□□ 0.48
DNMT1-208ENST00000586667 ROCK2O75116 1388 aaKnown RBP18.03■□□□□ 0.48
DNMT1-208ENST00000586667 LRPPRCP42704 1394 aaKnown RBP18.03■□□□□ 0.48
DNMT1-208ENST00000586667 DLC1Q96QB1 1528 aa18.03■□□□□ 0.48
DNMT1-208ENST00000586667 PTCH1Q13635 1447 aa18.02■□□□□ 0.48
DNMT1-208ENST00000586667 NKTRP30414 1462 aaKnown RBP18.01■□□□□ 0.47
DNMT1-208ENST00000586667 ZEB1P37275 1124 aaPredicted RBP18■□□□□ 0.47
DNMT1-208ENST00000586667 TMEM132EQ6IEE7 984 aa18■□□□□ 0.47
DNMT1-208ENST00000586667 BCANQ96GW7 911 aa17.98■□□□□ 0.47
DNMT1-208ENST00000586667 ABCC11Q96J66 1382 aa17.98■□□□□ 0.47
DNMT1-208ENST00000586667 LTBP4Q8N2S1 1624 aa17.98■□□□□ 0.47
DNMT1-208ENST00000586667 ROBO2Q9HCK4 1378 aa17.97■□□□□ 0.47
DNMT1-208ENST00000586667 DMRT2Q9Y5R5 561 aa17.95■□□□□ 0.46
DNMT1-208ENST00000586667 XIRP1Q702N8 1843 aaKnown RBP17.95■□□□□ 0.46
DNMT1-208ENST00000586667 ZNF335Q9H4Z2 1342 aaPredicted RBP17.95■□□□□ 0.46
DNMT1-208ENST00000586667 USP47Q96K76 1375 aa17.94■□□□□ 0.46
DNMT1-208ENST00000586667 QRICH2Q9H0J4 1663 aa17.94■□□□□ 0.46
DNMT1-208ENST00000586667 FAM135BQ49AJ0 1406 aa17.94■□□□□ 0.46
DNMT1-208ENST00000586667 PLEKHH1Q9ULM0 1364 aa17.93■□□□□ 0.46
DNMT1-208ENST00000586667 NALCNQ8IZF0 1738 aa17.93■□□□□ 0.46
DNMT1-208ENST00000586667 KCNA6P17658 529 aa17.93■□□□□ 0.46
DNMT1-208ENST00000586667 CARD11Q9BXL7 1154 aa17.92■□□□□ 0.46
DNMT1-208ENST00000586667 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.92■□□□□ 0.46
DNMT1-208ENST00000586667 ADGRB2O60241 1585 aa17.91■□□□□ 0.46
DNMT1-208ENST00000586667 AMOTL2Q9Y2J4 779 aa17.91■□□□□ 0.46
DNMT1-208ENST00000586667 LRRC7Q96NW7 1537 aa17.91■□□□□ 0.46
DNMT1-208ENST00000586667 STK26Q9P289 416 aa17.9■□□□□ 0.46
DNMT1-208ENST00000586667 TRAK1Q9UPV9 953 aa17.89■□□□□ 0.45
DNMT1-208ENST00000586667 EIF3AQ14152 1382 aaKnown RBP17.88■□□□□ 0.45
DNMT1-208ENST00000586667 TULP4Q9NRJ4 1543 aa17.88■□□□□ 0.45
DNMT1-208ENST00000586667 SBNO2Q9Y2G9 1366 aa17.87■□□□□ 0.45
DNMT1-208ENST00000586667 CDC42BPGQ6DT37 1551 aa17.87■□□□□ 0.45
DNMT1-208ENST00000586667 SIRT1Q96EB6 747 aa17.86■□□□□ 0.45
DNMT1-208ENST00000586667 ADGRL3Q9HAR2 1447 aa17.86■□□□□ 0.45
DNMT1-208ENST00000586667 PRAM1Q96QH2 718 aa17.85■□□□□ 0.45
DNMT1-208ENST00000586667 TMEM94Q12767 1356 aa17.84■□□□□ 0.45
DNMT1-208ENST00000586667 CENPJQ9HC77 1338 aaPredicted RBP17.84■□□□□ 0.45
DNMT1-208ENST00000586667 WAPLQ7Z5K2 1190 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 147 ms