RNA–Protein interactions for RNA: ENST00000586577.1

CNN1-205, Transcript of calponin 1, humanhuman

TSL 3

Gene CNN1, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-205ENST00000586577 UPF1Q92900 1129 aaKnown RBP eCLIP19.66■□□□□ 0.74
CNN1-205ENST00000586577 SLAIN2Q9P270 581 aa19.66■□□□□ 0.74
CNN1-205ENST00000586577 NKTRP30414 1462 aaKnown RBP19.66■□□□□ 0.74
CNN1-205ENST00000586577 MEX3CQ5U5Q3 659 aaKnown RBP19.65■□□□□ 0.74
CNN1-205ENST00000586577 PIK3C2BO00750 1634 aa19.65■□□□□ 0.74
CNN1-205ENST00000586577 KDM5AP29375 1690 aaKnown RBP19.65■□□□□ 0.74
CNN1-205ENST00000586577 EFCAB6Q5THR3 1501 aa19.64■□□□□ 0.73
CNN1-205ENST00000586577 SPATA31A6Q5VVP1 1343 aa19.63■□□□□ 0.73
CNN1-205ENST00000586577 SLC26A8Q96RN1 970 aa19.63■□□□□ 0.73
CNN1-205ENST00000586577 RBM33Q96EV2 1170 aaKnown RBP19.62■□□□□ 0.73
CNN1-205ENST00000586577 KANK1Q14678 1352 aa19.61■□□□□ 0.73
CNN1-205ENST00000586577 BCANQ96GW7 911 aa19.61■□□□□ 0.73
CNN1-205ENST00000586577 TRIM52Q96A61 297 aa19.6■□□□□ 0.73
CNN1-205ENST00000586577 TET3O43151 1660 aa19.59■□□□□ 0.73
CNN1-205ENST00000586577 NWD1Q149M9 1564 aa19.59■□□□□ 0.73
CNN1-205ENST00000586577 GCC2Q8IWJ2 1684 aa19.59■□□□□ 0.73
CNN1-205ENST00000586577 IQGAP3Q86VI3 1631 aa19.58■□□□□ 0.72
CNN1-205ENST00000586577 RXRBP28702 533 aa19.57■□□□□ 0.72
CNN1-205ENST00000586577 IDI1Q13907 227 aa19.57■□□□□ 0.72
CNN1-205ENST00000586577 NAIPQ13075 1403 aa19.56■□□□□ 0.72
CNN1-205ENST00000586577 E9PCH4 1651 aa19.56■□□□□ 0.72
CNN1-205ENST00000586577 COL16A1Q07092 1604 aaPredicted RBP19.55■□□□□ 0.72
CNN1-205ENST00000586577 NOS1P29475 1434 aa19.55■□□□□ 0.72
CNN1-205ENST00000586577 NCOA3Q9Y6Q9 1424 aa19.52■□□□□ 0.72
CNN1-205ENST00000586577 LRP6O75581 1613 aa19.52■□□□□ 0.72
CNN1-205ENST00000586577 HDGFP51858 240 aaKnown RBP19.52■□□□□ 0.72
CNN1-205ENST00000586577 C14orf37Q86TY3 774 aa19.51■□□□□ 0.71
CNN1-205ENST00000586577 SLC52A1Q9NWF4 448 aa19.51■□□□□ 0.71
CNN1-205ENST00000586577 CDK12Q9NYV4 1490 aaPredicted RBP19.51■□□□□ 0.71
CNN1-205ENST00000586577 CADPS2Q86UW7 1296 aa19.5■□□□□ 0.71
CNN1-205ENST00000586577 ADGRB3O60242 1522 aa19.5■□□□□ 0.71
CNN1-205ENST00000586577 HFM1A2PYH4 1435 aa19.5■□□□□ 0.71
CNN1-205ENST00000586577 SHPRHQ149N8 1683 aa19.49■□□□□ 0.71
CNN1-205ENST00000586577 RPRD2Q5VT52 1461 aaKnown RBP19.49■□□□□ 0.71
CNN1-205ENST00000586577 CHD2O14647 1828 aaKnown RBP19.49■□□□□ 0.71
CNN1-205ENST00000586577 NUP155O75694 1391 aa19.49■□□□□ 0.71
CNN1-205ENST00000586577 PPP1R15AO75807 674 aaPredicted RBP19.48■□□□□ 0.71
CNN1-205ENST00000586577 ATF3P18847 181 aa19.47■□□□□ 0.71
CNN1-205ENST00000586577 AHDC1Q5TGY3 1603 aaPredicted RBP19.47■□□□□ 0.71
CNN1-205ENST00000586577 MYO5BQ9ULV0 1848 aa19.46■□□□□ 0.71
CNN1-205ENST00000586577 PLEKHG1Q9ULL1 1385 aa19.46■□□□□ 0.71
CNN1-205ENST00000586577 FOXD1Q16676 465 aa19.45■□□□□ 0.7
CNN1-205ENST00000586577 C19orf44Q9H6X5 657 aa19.45■□□□□ 0.7
CNN1-205ENST00000586577 NUTM2BA6NNL0 878 aaPredicted RBP19.43■□□□□ 0.7
CNN1-205ENST00000586577 NUTM2EB1AL46 878 aaPredicted RBP19.43■□□□□ 0.7
CNN1-205ENST00000586577 NUTM2AQ8IVF1 878 aaPredicted RBP19.43■□□□□ 0.7
CNN1-205ENST00000586577 TBX22Q9Y458 520 aa19.43■□□□□ 0.7
CNN1-205ENST00000586577 SRCAPQ6ZRS2 3230 aa19.42■□□□□ 0.7
CNN1-205ENST00000586577 TMEM131LA2VDJ0 1609 aa19.41■□□□□ 0.7
CNN1-205ENST00000586577 AFF2P51816 1311 aa19.41■□□□□ 0.7
CNN1-205ENST00000586577 SPHKAPQ2M3C7 1700 aa19.4■□□□□ 0.7
CNN1-205ENST00000586577 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.4■□□□□ 0.7
CNN1-205ENST00000586577 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.4■□□□□ 0.7
CNN1-205ENST00000586577 ZFYVE9O95405 1425 aa19.4■□□□□ 0.7
CNN1-205ENST00000586577 RIMS2Q9UQ26 1411 aa19.4■□□□□ 0.7
CNN1-205ENST00000586577 RBM6P78332 1123 aaKnown RBP19.38■□□□□ 0.69
CNN1-205ENST00000586577 PIK3R4Q99570 1358 aa19.37■□□□□ 0.69
CNN1-205ENST00000586577 NUTM2DQ5VT03 806 aaPredicted RBP19.36■□□□□ 0.69
CNN1-205ENST00000586577 BRINP3Q76B58 766 aa19.36■□□□□ 0.69
CNN1-205ENST00000586577 QTRT2Q9H974 415 aaKnown RBP19.35■□□□□ 0.69
CNN1-205ENST00000586577 DIP2AQ14689 1571 aa19.35■□□□□ 0.69
CNN1-205ENST00000586577 CLTCL1P53675 1640 aa19.33■□□□□ 0.69
CNN1-205ENST00000586577 LRRC59Q96AG4 307 aaKnown RBP19.33■□□□□ 0.68
CNN1-205ENST00000586577 NGLY1Q96IV0 654 aa19.33■□□□□ 0.68
CNN1-205ENST00000586577 C8orf37Q96NL8 207 aa19.33■□□□□ 0.68
CNN1-205ENST00000586577 RGS12O14924 1447 aa19.33■□□□□ 0.68
CNN1-205ENST00000586577 SETD5Q9C0A6 1442 aa19.33■□□□□ 0.68
CNN1-205ENST00000586577 DCCP43146 1447 aa19.32■□□□□ 0.68
CNN1-205ENST00000586577 ZRANB1Q9UGI0 708 aa19.31■□□□□ 0.68
CNN1-205ENST00000586577 ATAD2Q6PL18 1390 aa19.31■□□□□ 0.68
CNN1-205ENST00000586577 TRPM2O94759 1503 aa19.3■□□□□ 0.68
CNN1-205ENST00000586577 CHGAP10645 457 aaKnown RBP19.3■□□□□ 0.68
CNN1-205ENST00000586577 ASXL1Q8IXJ9 1541 aa19.29■□□□□ 0.68
CNN1-205ENST00000586577 ADAMTS13Q76LX8 1427 aa19.28■□□□□ 0.68
CNN1-205ENST00000586577 AMOTL2Q9Y2J4 779 aa19.28■□□□□ 0.68
CNN1-205ENST00000586577 SLC4A1APQ9BWU0 796 aaKnown RBP19.25■□□□□ 0.67
CNN1-205ENST00000586577 NHSL1Q5SYE7 1610 aa19.25■□□□□ 0.67
CNN1-205ENST00000586577 RAB3GAP2Q9H2M9 1393 aa19.23■□□□□ 0.67
CNN1-205ENST00000586577 KIF1BO60333 1816 aa19.22■□□□□ 0.67
CNN1-205ENST00000586577 PNPLA6Q8IY17 1366 aa19.21■□□□□ 0.67
CNN1-205ENST00000586577 MST1RQ04912 1400 aa19.21■□□□□ 0.67
CNN1-205ENST00000586577 CCDC125Q86Z20 511 aa19.21■□□□□ 0.67
CNN1-205ENST00000586577 TRPC5Q9UL62 973 aaPredicted RBP19.2■□□□□ 0.66
CNN1-205ENST00000586577 NRXN3Q9Y4C0 1643 aa19.2■□□□□ 0.66
CNN1-205ENST00000586577 NEXMIFQ5QGS0 1516 aa19.2■□□□□ 0.66
CNN1-205ENST00000586577 ADAMTS2O95450 1211 aa19.19■□□□□ 0.66
CNN1-205ENST00000586577 MPHOSPH9Q99550 1183 aa19.19■□□□□ 0.66
CNN1-205ENST00000586577 PTPRUQ92729 1446 aa19.18■□□□□ 0.66
CNN1-205ENST00000586577 USP21Q9UK80 565 aa19.18■□□□□ 0.66
CNN1-205ENST00000586577 XRN1Q8IZH2 1706 aaKnown RBP19.14■□□□□ 0.66
CNN1-205ENST00000586577 DDX17Q92841 729 aaKnown RBP19.14■□□□□ 0.65
CNN1-205ENST00000586577 ADGRL3Q9HAR2 1447 aa19.13■□□□□ 0.65
CNN1-205ENST00000586577 PPLO60437 1756 aa19.12■□□□□ 0.65
CNN1-205ENST00000586577 SETBP1Q9Y6X0 1596 aa19.12■□□□□ 0.65
CNN1-205ENST00000586577 PTCH1Q13635 1447 aa19.12■□□□□ 0.65
CNN1-205ENST00000586577 ZNF326Q5BKZ1 582 aaKnown RBP19.11■□□□□ 0.65
CNN1-205ENST00000586577 FNBP4Q8N3X1 1017 aaPredicted RBP19.11■□□□□ 0.65
CNN1-205ENST00000586577 EP400Q96L91 3159 aa19.11■□□□□ 0.65
CNN1-205ENST00000586577 ATRNO75882 1429 aa19.09■□□□□ 0.65
CNN1-205ENST00000586577 SPATA31E1Q6ZUB1 1445 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms