RNA–Protein interactions for RNA: ENST00000586127.6

GFAP-208, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 1,678 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-208ENST00000586127 IQGAP1P46940 1657 aa24.45■■□□□ 1.5
GFAP-208ENST00000586127 ESF1Q9H501 851 aaKnown RBP24.45■■□□□ 1.5
GFAP-208ENST00000586127 SLC52A1Q9NWF4 448 aa24.45■■□□□ 1.5
GFAP-208ENST00000586127 ADGRF5Q8IZF2 1346 aa24.44■■□□□ 1.5
GFAP-208ENST00000586127 STAC3Q96MF2 364 aa24.44■■□□□ 1.5
GFAP-208ENST00000586127 C3P01024 1663 aa24.44■■□□□ 1.5
GFAP-208ENST00000586127 WASHC2AQ641Q2 1341 aa24.42■■□□□ 1.5
GFAP-208ENST00000586127 C11orf95C9JLR9 678 aaPredicted RBP24.42■■□□□ 1.5
GFAP-208ENST00000586127 DDX10Q13206 875 aaKnown RBP24.4■■□□□ 1.5
GFAP-208ENST00000586127 PIK3C2GO75747 1445 aa24.39■■□□□ 1.49
GFAP-208ENST00000586127 RPGRIP1LQ68CZ1 1315 aa24.38■■□□□ 1.49
GFAP-208ENST00000586127 CCDC7Q96M83 1385 aa24.37■■□□□ 1.49
GFAP-208ENST00000586127 MIER1Q8N108 512 aa24.36■■□□□ 1.49
GFAP-208ENST00000586127 A2ML1A8K2U0 1454 aa24.35■■□□□ 1.49
GFAP-208ENST00000586127 ST20-MTHFSA0A0A6YYL1 179 aa24.34■■□□□ 1.49
GFAP-208ENST00000586127 TNRQ92752 1358 aa24.34■■□□□ 1.49
GFAP-208ENST00000586127 RIMS1Q86UR5 1692 aaKnown RBP24.34■■□□□ 1.49
GFAP-208ENST00000586127 CFAP70Q5T0N1 1121 aa24.34■■□□□ 1.49
GFAP-208ENST00000586127 NUTM2DQ5VT03 806 aaPredicted RBP24.34■■□□□ 1.49
GFAP-208ENST00000586127 KIF7Q2M1P5 1343 aa24.33■■□□□ 1.49
GFAP-208ENST00000586127 SETBP1Q9Y6X0 1596 aa24.33■■□□□ 1.49
GFAP-208ENST00000586127 UBR1Q8IWV7 1749 aa24.32■■□□□ 1.48
GFAP-208ENST00000586127 KDM5AP29375 1690 aaKnown RBP24.31■■□□□ 1.48
GFAP-208ENST00000586127 ADAMTSL3P82987 1691 aa24.31■■□□□ 1.48
GFAP-208ENST00000586127 CEBPAP49715 358 aaPredicted RBP24.3■■□□□ 1.48
GFAP-208ENST00000586127 ZFYVE9O95405 1425 aa24.3■■□□□ 1.48
GFAP-208ENST00000586127 SCAF11Q99590 1463 aaKnown RBP24.3■■□□□ 1.48
GFAP-208ENST00000586127 ADGRB1O14514 1584 aa24.29■■□□□ 1.48
GFAP-208ENST00000586127 VGFO15240 615 aaPredicted RBP24.26■■□□□ 1.47
GFAP-208ENST00000586127 STAG3Q9UJ98 1225 aa24.26■■□□□ 1.47
GFAP-208ENST00000586127 C14orf93Q9H972 538 aaKnown RBP24.24■■□□□ 1.47
GFAP-208ENST00000586127 ASXL1Q8IXJ9 1541 aa24.24■■□□□ 1.47
GFAP-208ENST00000586127 MYO3AQ8NEV4 1616 aa24.24■■□□□ 1.47
GFAP-208ENST00000586127 RIMS2Q9UQ26 1411 aa24.23■■□□□ 1.47
GFAP-208ENST00000586127 TESK2Q96S53 571 aa24.23■■□□□ 1.47
GFAP-208ENST00000586127 NLRP1Q9C000 1473 aa24.22■■□□□ 1.47
GFAP-208ENST00000586127 PLPPR3Q6T4P5 718 aa24.21■■□□□ 1.47
GFAP-208ENST00000586127 SETD1AO15047 1707 aaKnown RBP24.2■■□□□ 1.46
GFAP-208ENST00000586127 SENP3Q9H4L4 574 aaPredicted RBP24.2■■□□□ 1.46
GFAP-208ENST00000586127 DISP3Q9P2K9 1392 aa24.2■■□□□ 1.46
GFAP-208ENST00000586127 NRXN3Q9Y4C0 1643 aa24.19■■□□□ 1.46
GFAP-208ENST00000586127 ALKQ9UM73 1620 aa24.18■■□□□ 1.46
GFAP-208ENST00000586127 ARHGEF28Q8N1W1 1705 aaKnown RBP24.18■■□□□ 1.46
GFAP-208ENST00000586127 TMEM132EQ6IEE7 984 aa24.17■■□□□ 1.46
GFAP-208ENST00000586127 EIF3AQ14152 1382 aaKnown RBP24.17■■□□□ 1.46
GFAP-208ENST00000586127 POLR3GLQ9BT43 218 aa24.16■■□□□ 1.46
GFAP-208ENST00000586127 QRICH2Q9H0J4 1663 aa24.16■■□□□ 1.46
GFAP-208ENST00000586127 PTPRMP28827 1452 aa24.13■■□□□ 1.45
GFAP-208ENST00000586127 TMEM2Q9UHN6 1383 aa24.13■■□□□ 1.45
GFAP-208ENST00000586127 CEP170BQ9Y4F5 1589 aaPredicted RBP24.1■■□□□ 1.45
GFAP-208ENST00000586127 TRAK1Q9UPV9 953 aa24.09■■□□□ 1.45
GFAP-208ENST00000586127 ZNF142P52746 1687 aaPredicted RBP24.08■■□□□ 1.45
GFAP-208ENST00000586127 TMF1P82094 1093 aa24.08■■□□□ 1.44
GFAP-208ENST00000586127 SLIT1O75093 1534 aa24.08■■□□□ 1.44
GFAP-208ENST00000586127 MYOM1P52179 1685 aa24.07■■□□□ 1.44
GFAP-208ENST00000586127 ARHGAP23Q9P227 1491 aa24.06■■□□□ 1.44
GFAP-208ENST00000586127 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.05■■□□□ 1.44
GFAP-208ENST00000586127 YTHDC2Q9H6S0 1430 aaKnown RBP24.04■■□□□ 1.44
GFAP-208ENST00000586127 CENPJQ9HC77 1338 aaPredicted RBP24.04■■□□□ 1.44
GFAP-208ENST00000586127 ANP32CO43423 234 aa24.04■■□□□ 1.44
GFAP-208ENST00000586127 SBNO2Q9Y2G9 1366 aa24.03■■□□□ 1.44
GFAP-208ENST00000586127 LTKP29376 864 aa24.01■■□□□ 1.43
GFAP-208ENST00000586127 STK26Q9P289 416 aa24■■□□□ 1.43
GFAP-208ENST00000586127 ADAMTS13Q76LX8 1427 aa23.98■■□□□ 1.43
GFAP-208ENST00000586127 METP08581 1390 aa23.98■■□□□ 1.43
GFAP-208ENST00000586127 PLEKHG1Q9ULL1 1385 aa23.98■■□□□ 1.43
GFAP-208ENST00000586127 TULP4Q9NRJ4 1543 aa23.97■■□□□ 1.43
GFAP-208ENST00000586127 KNDC1Q76NI1 1749 aa23.97■■□□□ 1.43
GFAP-208ENST00000586127 HDGFP51858 240 aaKnown RBP23.97■■□□□ 1.43
GFAP-208ENST00000586127 TXNDC2Q86VQ3 553 aa23.95■■□□□ 1.43
GFAP-208ENST00000586127 DLC1Q96QB1 1528 aa23.95■■□□□ 1.43
GFAP-208ENST00000586127 LRPPRCP42704 1394 aaKnown RBP23.94■■□□□ 1.42
GFAP-208ENST00000586127 THEMISQ8N1K5 641 aaPredicted RBP23.94■■□□□ 1.42
GFAP-208ENST00000586127 MED14O60244 1454 aa23.93■■□□□ 1.42
GFAP-208ENST00000586127 SETD1BQ9UPS6 1966 aaKnown RBP23.92■■□□□ 1.42
GFAP-208ENST00000586127 CDCA8Q53HL2 280 aa23.92■■□□□ 1.42
GFAP-208ENST00000586127 PRKRIP1Q9H875 184 aaPredicted RBP23.91■■□□□ 1.42
GFAP-208ENST00000586127 EID1Q9Y6B2 187 aa23.91■■□□□ 1.42
GFAP-208ENST00000586127 CPS1P31327 1500 aa23.9■■□□□ 1.42
GFAP-208ENST00000586127 SAFB2Q14151 953 aaKnown RBP eCLIP23.9■■□□□ 1.42
GFAP-208ENST00000586127 BCANQ96GW7 911 aa23.9■■□□□ 1.42
GFAP-208ENST00000586127 PRAM1Q96QH2 718 aa23.9■■□□□ 1.42
GFAP-208ENST00000586127 CCER2I3L3R5 266 aa23.89■■□□□ 1.41
GFAP-208ENST00000586127 SLC24A1O60721 1099 aa23.88■■□□□ 1.41
GFAP-208ENST00000586127 YTHDC1Q96MU7 727 aaKnown RBP23.88■■□□□ 1.41
GFAP-208ENST00000586127 ABCC11Q96J66 1382 aa23.88■■□□□ 1.41
GFAP-208ENST00000586127 DIP2AQ14689 1571 aa23.87■■□□□ 1.41
GFAP-208ENST00000586127 PLEKHH1Q9ULM0 1364 aa23.87■■□□□ 1.41
GFAP-208ENST00000586127 PANK3Q9H999 370 aa23.87■■□□□ 1.41
GFAP-208ENST00000586127 TECPR2O15040 1411 aa23.86■■□□□ 1.41
GFAP-208ENST00000586127 PER1O15534 1290 aaPredicted RBP23.86■■□□□ 1.41
GFAP-208ENST00000586127 CNGB1Q14028 1251 aaPredicted RBP23.85■■□□□ 1.41
GFAP-208ENST00000586127 SLC26A8Q96RN1 970 aa23.84■■□□□ 1.41
GFAP-208ENST00000586127 POGKQ9P215 609 aa23.84■■□□□ 1.41
GFAP-208ENST00000586127 PTPRUQ92729 1446 aa23.83■■□□□ 1.41
GFAP-208ENST00000586127 MINK1Q8N4C8 1332 aaPredicted RBP23.83■■□□□ 1.4
GFAP-208ENST00000586127 EVC2Q86UK5 1308 aa23.82■■□□□ 1.4
GFAP-208ENST00000586127 WAPLQ7Z5K2 1190 aa23.82■■□□□ 1.4
GFAP-208ENST00000586127 XRN1Q8IZH2 1706 aaKnown RBP23.8■■□□□ 1.4
GFAP-208ENST00000586127 FAM135BQ49AJ0 1406 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms