RNA–Protein interactions for RNA: ENST00000585876.1

LRFN3-202, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

TSL 4

Gene LRFN3, Length 558 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-202ENST00000585876 SPATA31E1Q6ZUB1 1445 aa17.2■□□□□ 0.34
LRFN3-202ENST00000585876 LTKP29376 864 aa17.19■□□□□ 0.34
LRFN3-202ENST00000585876 DIP2AQ14689 1571 aa17.19■□□□□ 0.34
LRFN3-202ENST00000585876 NRXN3Q9Y4C0 1643 aa17.18■□□□□ 0.34
LRFN3-202ENST00000585876 ANKRD30BQ9BXX2 1392 aa17.18■□□□□ 0.34
LRFN3-202ENST00000585876 FOXD1Q16676 465 aa17.18■□□□□ 0.34
LRFN3-202ENST00000585876 EID1Q9Y6B2 187 aa17.18■□□□□ 0.34
LRFN3-202ENST00000585876 SETBP1Q9Y6X0 1596 aa17.18■□□□□ 0.34
LRFN3-202ENST00000585876 PLEKHG1Q9ULL1 1385 aa17.17■□□□□ 0.34
LRFN3-202ENST00000585876 STRCP1A6NGW2 1772 aa17.17■□□□□ 0.34
LRFN3-202ENST00000585876 TXNDC2Q86VQ3 553 aa17.16■□□□□ 0.34
LRFN3-202ENST00000585876 NWD1Q149M9 1564 aa17.15■□□□□ 0.34
LRFN3-202ENST00000585876 SETD1AO15047 1707 aaKnown RBP17.14■□□□□ 0.33
LRFN3-202ENST00000585876 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.14■□□□□ 0.33
LRFN3-202ENST00000585876 CPS1P31327 1500 aa17.13■□□□□ 0.33
LRFN3-202ENST00000585876 CHD2O14647 1828 aaKnown RBP17.13■□□□□ 0.33
LRFN3-202ENST00000585876 HDGFP51858 240 aaKnown RBP17.13■□□□□ 0.33
LRFN3-202ENST00000585876 IQSEC2Q5JU85 1478 aa17.12■□□□□ 0.33
LRFN3-202ENST00000585876 CHGAP10645 457 aaKnown RBP17.12■□□□□ 0.33
LRFN3-202ENST00000585876 RPGRIP1LQ68CZ1 1315 aa17.11■□□□□ 0.33
LRFN3-202ENST00000585876 ADAMTS13Q76LX8 1427 aa17.11■□□□□ 0.33
LRFN3-202ENST00000585876 XIRP1Q702N8 1843 aaKnown RBP17.08■□□□□ 0.33
LRFN3-202ENST00000585876 MYOM2P54296 1465 aa17.08■□□□□ 0.32
LRFN3-202ENST00000585876 ZNF335Q9H4Z2 1342 aaPredicted RBP17.08■□□□□ 0.32
LRFN3-202ENST00000585876 XRN1Q8IZH2 1706 aaKnown RBP17.07■□□□□ 0.32
LRFN3-202ENST00000585876 DHX57Q6P158 1386 aaKnown RBP17.07■□□□□ 0.32
LRFN3-202ENST00000585876 LAMC1P11047 1609 aa17.07■□□□□ 0.32
LRFN3-202ENST00000585876 NKTRP30414 1462 aaKnown RBP17.06■□□□□ 0.32
LRFN3-202ENST00000585876 NRXN1Q9ULB1 1477 aa17.06■□□□□ 0.32
LRFN3-202ENST00000585876 PIK3R4Q99570 1358 aa17.06■□□□□ 0.32
LRFN3-202ENST00000585876 PPP1R15AO75807 674 aaPredicted RBP17.06■□□□□ 0.32
LRFN3-202ENST00000585876 ZNF326Q5BKZ1 582 aaKnown RBP17.06■□□□□ 0.32
LRFN3-202ENST00000585876 ALKQ9UM73 1620 aa17.03■□□□□ 0.32
LRFN3-202ENST00000585876 TBX22Q9Y458 520 aa17.03■□□□□ 0.32
LRFN3-202ENST00000585876 PIK3C2GO75747 1445 aa17.03■□□□□ 0.32
LRFN3-202ENST00000585876 VGFO15240 615 aaPredicted RBP17.02■□□□□ 0.32
LRFN3-202ENST00000585876 PRAG1Q86YV5 1406 aa17.02■□□□□ 0.31
LRFN3-202ENST00000585876 LRRC7Q96NW7 1537 aa17.01■□□□□ 0.31
LRFN3-202ENST00000585876 NUTM2DQ5VT03 806 aaPredicted RBP17■□□□□ 0.31
LRFN3-202ENST00000585876 CERKQ8TCT0 537 aa17■□□□□ 0.31
LRFN3-202ENST00000585876 SLC26A8Q96RN1 970 aa17■□□□□ 0.31
LRFN3-202ENST00000585876 KNDC1Q76NI1 1749 aa16.99■□□□□ 0.31
LRFN3-202ENST00000585876 ASXL1Q8IXJ9 1541 aa16.97■□□□□ 0.31
LRFN3-202ENST00000585876 KIAA1210Q9ULL0 1709 aa16.97■□□□□ 0.31
LRFN3-202ENST00000585876 KCNA6P17658 529 aa16.97■□□□□ 0.31
LRFN3-202ENST00000585876 PTPRUQ92729 1446 aa16.96■□□□□ 0.31
LRFN3-202ENST00000585876 RGL3Q3MIN7 710 aa16.96■□□□□ 0.31
LRFN3-202ENST00000585876 STAC3Q96MF2 364 aa16.96■□□□□ 0.31
LRFN3-202ENST00000585876 ADGRF5Q8IZF2 1346 aa16.96■□□□□ 0.3
LRFN3-202ENST00000585876 METP08581 1390 aa16.95■□□□□ 0.3
LRFN3-202ENST00000585876 BCANQ96GW7 911 aa16.95■□□□□ 0.3
LRFN3-202ENST00000585876 PCGF6Q9BYE7 350 aa16.94■□□□□ 0.3
LRFN3-202ENST00000585876 PTCH1Q13635 1447 aa16.93■□□□□ 0.3
LRFN3-202ENST00000585876 NCOA3Q9Y6Q9 1424 aa16.93■□□□□ 0.3
LRFN3-202ENST00000585876 TECPR2O15040 1411 aa16.92■□□□□ 0.3
LRFN3-202ENST00000585876 ADGRB1O14514 1584 aa16.91■□□□□ 0.3
LRFN3-202ENST00000585876 NALCNQ8IZF0 1738 aa16.9■□□□□ 0.3
LRFN3-202ENST00000585876 TMEM94Q12767 1356 aa16.89■□□□□ 0.3
LRFN3-202ENST00000585876 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.88■□□□□ 0.29
LRFN3-202ENST00000585876 SENP3Q9H4L4 574 aaPredicted RBP16.88■□□□□ 0.29
LRFN3-202ENST00000585876 FBXO41Q8TF61 875 aa16.87■□□□□ 0.29
LRFN3-202ENST00000585876 C14orf93Q9H972 538 aaKnown RBP16.87■□□□□ 0.29
LRFN3-202ENST00000585876 TRPM1Q7Z4N2 1603 aa16.86■□□□□ 0.29
LRFN3-202ENST00000585876 DCAF11Q8TEB1 546 aa16.86■□□□□ 0.29
LRFN3-202ENST00000585876 AMOTL2Q9Y2J4 779 aa16.86■□□□□ 0.29
LRFN3-202ENST00000585876 CLSPNQ9HAW4 1339 aa16.86■□□□□ 0.29
LRFN3-202ENST00000585876 LRPPRCP42704 1394 aaKnown RBP16.86■□□□□ 0.29
LRFN3-202ENST00000585876 DLC1Q96QB1 1528 aa16.86■□□□□ 0.29
LRFN3-202ENST00000585876 SIN3AQ96ST3 1273 aa16.85■□□□□ 0.29
LRFN3-202ENST00000585876 DCCP43146 1447 aa16.85■□□□□ 0.29
LRFN3-202ENST00000585876 YTHDC2Q9H6S0 1430 aaKnown RBP16.85■□□□□ 0.29
LRFN3-202ENST00000585876 ABCC11Q96J66 1382 aa16.84■□□□□ 0.29
LRFN3-202ENST00000585876 ARHGEF28Q8N1W1 1705 aaKnown RBP16.84■□□□□ 0.29
LRFN3-202ENST00000585876 PROSER2Q86WR7 435 aaPredicted RBP16.83■□□□□ 0.28
LRFN3-202ENST00000585876 ADGRL3Q9HAR2 1447 aa16.83■□□□□ 0.28
LRFN3-202ENST00000585876 FAM135BQ49AJ0 1406 aa16.82■□□□□ 0.28
LRFN3-202ENST00000585876 ROBO2Q9HCK4 1378 aa16.82■□□□□ 0.28
LRFN3-202ENST00000585876 CDC42BPGQ6DT37 1551 aa16.81■□□□□ 0.28
LRFN3-202ENST00000585876 MSH6P52701 1360 aa16.81■□□□□ 0.28
LRFN3-202ENST00000585876 L3MBTL2Q969R5 705 aa16.81■□□□□ 0.28
LRFN3-202ENST00000585876 CFAP70Q5T0N1 1121 aa16.8■□□□□ 0.28
LRFN3-202ENST00000585876 ADGRB2O60241 1585 aa16.78■□□□□ 0.28
LRFN3-202ENST00000585876 KDM2AQ9Y2K7 1162 aa16.78■□□□□ 0.28
LRFN3-202ENST00000585876 UBAP1LF5GYI3 381 aa16.77■□□□□ 0.28
LRFN3-202ENST00000585876 TOM1O60784 492 aa16.77■□□□□ 0.28
LRFN3-202ENST00000585876 NEUROD1Q13562 356 aa16.77■□□□□ 0.28
LRFN3-202ENST00000585876 SIRT1Q96EB6 747 aa16.77■□□□□ 0.28
LRFN3-202ENST00000585876 ROBO1Q9Y6N7 1651 aa16.77■□□□□ 0.28
LRFN3-202ENST00000585876 TONSLQ96HA7 1378 aa16.77■□□□□ 0.27
LRFN3-202ENST00000585876 TMEM132EQ6IEE7 984 aa16.76■□□□□ 0.27
LRFN3-202ENST00000585876 FMN2Q9NZ56 1722 aa16.76■□□□□ 0.27
LRFN3-202ENST00000585876 ILDR1Q86SU0 546 aaPredicted RBP16.75■□□□□ 0.27
LRFN3-202ENST00000585876 RBM33Q96EV2 1170 aaKnown RBP16.75■□□□□ 0.27
LRFN3-202ENST00000585876 C19orf44Q9H6X5 657 aa16.75■□□□□ 0.27
LRFN3-202ENST00000585876 RALGAPBQ86X10 1494 aa16.73■□□□□ 0.27
LRFN3-202ENST00000585876 MST1RQ04912 1400 aa16.72■□□□□ 0.27
LRFN3-202ENST00000585876 GPRASP1Q5JY77 1395 aa16.72■□□□□ 0.27
LRFN3-202ENST00000585876 CADPS2Q86UW7 1296 aa16.71■□□□□ 0.27
LRFN3-202ENST00000585876 TIMELESSQ9UNS1 1208 aa16.71■□□□□ 0.27
LRFN3-202ENST00000585876 PLEKHH1Q9ULM0 1364 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms