RNA–Protein interactions for RNA: ENST00000585741.1

HMG20B-215, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-215ENST00000585741 CCDC144AA2RUR9 1427 aa24.52■■□□□ 1.52
HMG20B-215ENST00000585741 LTKP29376 864 aa24.52■■□□□ 1.52
HMG20B-215ENST00000585741 CFAP65Q6ZU64 1925 aaKnown RBP24.52■■□□□ 1.52
HMG20B-215ENST00000585741 SLIT1O75093 1534 aa24.51■■□□□ 1.51
HMG20B-215ENST00000585741 MED1Q15648 1581 aaPredicted RBP24.5■■□□□ 1.51
HMG20B-215ENST00000585741 SIN3AQ96ST3 1273 aa24.5■■□□□ 1.51
HMG20B-215ENST00000585741 SCAF11Q99590 1463 aaKnown RBP24.5■■□□□ 1.51
HMG20B-215ENST00000585741 SPHKAPQ2M3C7 1700 aa24.47■■□□□ 1.51
HMG20B-215ENST00000585741 SYNMO15061 1565 aa24.46■■□□□ 1.51
HMG20B-215ENST00000585741 TRPM2O94759 1503 aa24.45■■□□□ 1.51
HMG20B-215ENST00000585741 NOS1P29475 1434 aa24.45■■□□□ 1.51
HMG20B-215ENST00000585741 SLC52A1Q9NWF4 448 aa24.45■■□□□ 1.5
HMG20B-215ENST00000585741 CHGAP10645 457 aaKnown RBP24.44■■□□□ 1.5
HMG20B-215ENST00000585741 TXNDC2Q86VQ3 553 aa24.44■■□□□ 1.5
HMG20B-215ENST00000585741 STAG3Q9UJ98 1225 aa24.43■■□□□ 1.5
HMG20B-215ENST00000585741 PIK3C2BO00750 1634 aa24.43■■□□□ 1.5
HMG20B-215ENST00000585741 TONSLQ96HA7 1378 aa24.42■■□□□ 1.5
HMG20B-215ENST00000585741 ZEB1P37275 1124 aaPredicted RBP24.42■■□□□ 1.5
HMG20B-215ENST00000585741 TMEM2Q9UHN6 1383 aa24.41■■□□□ 1.5
HMG20B-215ENST00000585741 XIRP1Q702N8 1843 aaKnown RBP24.38■■□□□ 1.49
HMG20B-215ENST00000585741 IDI1Q13907 227 aa24.37■■□□□ 1.49
HMG20B-215ENST00000585741 CLTCL1P53675 1640 aa24.35■■□□□ 1.49
HMG20B-215ENST00000585741 KDM5AP29375 1690 aaKnown RBP24.35■■□□□ 1.49
HMG20B-215ENST00000585741 RGL3Q3MIN7 710 aa24.35■■□□□ 1.49
HMG20B-215ENST00000585741 ZNF326Q5BKZ1 582 aaKnown RBP24.35■■□□□ 1.49
HMG20B-215ENST00000585741 TIMELESSQ9UNS1 1208 aa24.35■■□□□ 1.49
HMG20B-215ENST00000585741 EID1Q9Y6B2 187 aa24.34■■□□□ 1.49
HMG20B-215ENST00000585741 KIF1BO60333 1816 aa24.3■■□□□ 1.48
HMG20B-215ENST00000585741 SENP3Q9H4L4 574 aaPredicted RBP24.29■■□□□ 1.48
HMG20B-215ENST00000585741 L3MBTL2Q969R5 705 aa24.26■■□□□ 1.47
HMG20B-215ENST00000585741 ADGRB3O60242 1522 aa24.25■■□□□ 1.47
HMG20B-215ENST00000585741 KCNA6P17658 529 aa24.25■■□□□ 1.47
HMG20B-215ENST00000585741 DCAF11Q8TEB1 546 aa24.25■■□□□ 1.47
HMG20B-215ENST00000585741 TMEM94Q12767 1356 aa24.25■■□□□ 1.47
HMG20B-215ENST00000585741 SLC26A8Q96RN1 970 aa24.24■■□□□ 1.47
HMG20B-215ENST00000585741 KDM2AQ9Y2K7 1162 aa24.24■■□□□ 1.47
HMG20B-215ENST00000585741 FAM135BQ49AJ0 1406 aa24.24■■□□□ 1.47
HMG20B-215ENST00000585741 SPATA31E1Q6ZUB1 1445 aa24.24■■□□□ 1.47
HMG20B-215ENST00000585741 RPGRIP1LQ68CZ1 1315 aa24.23■■□□□ 1.47
HMG20B-215ENST00000585741 HDGFP51858 240 aaKnown RBP24.22■■□□□ 1.47
HMG20B-215ENST00000585741 PHF23Q9BUL5 403 aaPredicted RBP24.22■■□□□ 1.47
HMG20B-215ENST00000585741 RGS17Q9UGC6 210 aaPredicted RBP24.22■■□□□ 1.47
HMG20B-215ENST00000585741 STAC3Q96MF2 364 aa24.2■■□□□ 1.46
HMG20B-215ENST00000585741 NWD1Q149M9 1564 aa24.2■■□□□ 1.46
HMG20B-215ENST00000585741 ZFYVE9O95405 1425 aa24.19■■□□□ 1.46
HMG20B-215ENST00000585741 PPP1R15AO75807 674 aaPredicted RBP24.18■■□□□ 1.46
HMG20B-215ENST00000585741 RBM33Q96EV2 1170 aaKnown RBP24.18■■□□□ 1.46
HMG20B-215ENST00000585741 TMEM131LA2VDJ0 1609 aa24.17■■□□□ 1.46
HMG20B-215ENST00000585741 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.17■■□□□ 1.46
HMG20B-215ENST00000585741 VGFO15240 615 aaPredicted RBP24.16■■□□□ 1.46
HMG20B-215ENST00000585741 PROSER2Q86WR7 435 aaPredicted RBP24.16■■□□□ 1.46
HMG20B-215ENST00000585741 NKTRP30414 1462 aaKnown RBP24.15■■□□□ 1.46
HMG20B-215ENST00000585741 RIMS2Q9UQ26 1411 aa24.13■■□□□ 1.45
HMG20B-215ENST00000585741 PLEKHG1Q9ULL1 1385 aa24.13■■□□□ 1.45
HMG20B-215ENST00000585741 MYO5BQ9ULV0 1848 aa24.12■■□□□ 1.45
HMG20B-215ENST00000585741 ROBO1Q9Y6N7 1651 aa24.12■■□□□ 1.45
HMG20B-215ENST00000585741 NUTM2DQ5VT03 806 aaPredicted RBP24.12■■□□□ 1.45
HMG20B-215ENST00000585741 BCANQ96GW7 911 aa24.1■■□□□ 1.45
HMG20B-215ENST00000585741 CHD2O14647 1828 aaKnown RBP24.07■■□□□ 1.44
HMG20B-215ENST00000585741 NEXMIFQ5QGS0 1516 aa24.07■■□□□ 1.44
HMG20B-215ENST00000585741 MYOM2P54296 1465 aa24.07■■□□□ 1.44
HMG20B-215ENST00000585741 ADAMTS13Q76LX8 1427 aa24.05■■□□□ 1.44
HMG20B-215ENST00000585741 ADGRF5Q8IZF2 1346 aa24.05■■□□□ 1.44
HMG20B-215ENST00000585741 PPLO60437 1756 aa24.04■■□□□ 1.44
HMG20B-215ENST00000585741 TBX22Q9Y458 520 aa24.04■■□□□ 1.44
HMG20B-215ENST00000585741 MSH6P52701 1360 aa24.03■■□□□ 1.44
HMG20B-215ENST00000585741 SLAIN2Q9P270 581 aa24.03■■□□□ 1.44
HMG20B-215ENST00000585741 PRAG1Q86YV5 1406 aa24.02■■□□□ 1.44
HMG20B-215ENST00000585741 POTEAQ6S8J7 498 aa24.02■■□□□ 1.44
HMG20B-215ENST00000585741 NBPF8Q3BBV2 869 aa24.01■■□□□ 1.43
HMG20B-215ENST00000585741 IFT172Q9UG01 1749 aa24.01■■□□□ 1.43
HMG20B-215ENST00000585741 NCOA3Q9Y6Q9 1424 aa23.99■■□□□ 1.43
HMG20B-215ENST00000585741 ROCK2O75116 1388 aaKnown RBP23.96■■□□□ 1.43
HMG20B-215ENST00000585741 NRXN1Q9ULB1 1477 aa23.95■■□□□ 1.42
HMG20B-215ENST00000585741 PIK3C2GO75747 1445 aa23.95■■□□□ 1.42
HMG20B-215ENST00000585741 PHLPP1O60346 1717 aa23.95■■□□□ 1.42
HMG20B-215ENST00000585741 DIP2AQ14689 1571 aa23.95■■□□□ 1.42
HMG20B-215ENST00000585741 PIK3R4Q99570 1358 aa23.94■■□□□ 1.42
HMG20B-215ENST00000585741 CFAP70Q5T0N1 1121 aa23.94■■□□□ 1.42
HMG20B-215ENST00000585741 COL16A1Q07092 1604 aaPredicted RBP23.94■■□□□ 1.42
HMG20B-215ENST00000585741 PTPRUQ92729 1446 aa23.93■■□□□ 1.42
HMG20B-215ENST00000585741 CARD11Q9BXL7 1154 aa23.93■■□□□ 1.42
HMG20B-215ENST00000585741 C14orf93Q9H972 538 aaKnown RBP23.93■■□□□ 1.42
HMG20B-215ENST00000585741 JCADQ9P266 1359 aa23.92■■□□□ 1.42
HMG20B-215ENST00000585741 RALGAPBQ86X10 1494 aa23.91■■□□□ 1.42
HMG20B-215ENST00000585741 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.9■■□□□ 1.42
HMG20B-215ENST00000585741 NBPF1Q3BBV0 1214 aa23.88■■□□□ 1.41
HMG20B-215ENST00000585741 C19orf44Q9H6X5 657 aa23.88■■□□□ 1.41
HMG20B-215ENST00000585741 NRXN3Q9Y4C0 1643 aa23.88■■□□□ 1.41
HMG20B-215ENST00000585741 LAMC1P11047 1609 aa23.87■■□□□ 1.41
HMG20B-215ENST00000585741 TRPM1Q7Z4N2 1603 aa23.87■■□□□ 1.41
HMG20B-215ENST00000585741 LRP6O75581 1613 aa23.86■■□□□ 1.41
HMG20B-215ENST00000585741 AHDC1Q5TGY3 1603 aaPredicted RBP23.86■■□□□ 1.41
HMG20B-215ENST00000585741 AMOTL2Q9Y2J4 779 aa23.86■■□□□ 1.41
HMG20B-215ENST00000585741 SETBP1Q9Y6X0 1596 aa23.86■■□□□ 1.41
HMG20B-215ENST00000585741 KIAA1210Q9ULL0 1709 aa23.85■■□□□ 1.41
HMG20B-215ENST00000585741 CADPS2Q86UW7 1296 aa23.85■■□□□ 1.41
HMG20B-215ENST00000585741 TMEM132EQ6IEE7 984 aa23.84■■□□□ 1.41
HMG20B-215ENST00000585741 EIF4G2P78344 907 aaKnown RBP eCLIP23.83■■□□□ 1.41
HMG20B-215ENST00000585741 XRN1Q8IZH2 1706 aaKnown RBP23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms