RNA–Protein interactions for RNA: ENST00000585409.2

LSM7-203, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM7, Length 512 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-203ENST00000585409 MYO5BQ9ULV0 1848 aa35.35■■■■□ 3.25
LSM7-203ENST00000585409 PROSER2Q86WR7 435 aaPredicted RBP35.33■■■■□ 3.25
LSM7-203ENST00000585409 ANKRD50Q9ULJ7 1429 aa35.32■■■■□ 3.24
LSM7-203ENST00000585409 ZFYVE9O95405 1425 aa35.31■■■■□ 3.24
LSM7-203ENST00000585409 GCC2Q8IWJ2 1684 aa35.29■■■■□ 3.24
LSM7-203ENST00000585409 CHD2O14647 1828 aaKnown RBP35.28■■■■□ 3.24
LSM7-203ENST00000585409 RBM33Q96EV2 1170 aaKnown RBP35.28■■■■□ 3.24
LSM7-203ENST00000585409 TMEM131LA2VDJ0 1609 aa35.26■■■■□ 3.24
LSM7-203ENST00000585409 FAM50AQ14320 339 aaKnown RBP35.26■■■■□ 3.24
LSM7-203ENST00000585409 PLEKHG1Q9ULL1 1385 aa35.25■■■■□ 3.23
LSM7-203ENST00000585409 UNC13BO14795 1591 aa35.23■■■■□ 3.23
LSM7-203ENST00000585409 MSH6P52701 1360 aa35.21■■■■□ 3.23
LSM7-203ENST00000585409 RIMS2Q9UQ26 1411 aa35.2■■■■□ 3.23
LSM7-203ENST00000585409 BCANQ96GW7 911 aa35.19■■■■□ 3.22
LSM7-203ENST00000585409 PHLPP1O60346 1717 aa35.17■■■■□ 3.22
LSM7-203ENST00000585409 E9PCH4 1651 aa35.15■■■■□ 3.22
LSM7-203ENST00000585409 SLAIN2Q9P270 581 aa35.15■■■■□ 3.22
LSM7-203ENST00000585409 HDGFP51858 240 aaKnown RBP35.14■■■■□ 3.22
LSM7-203ENST00000585409 POTEAQ6S8J7 498 aa35.14■■■■□ 3.22
LSM7-203ENST00000585409 RRBP1Q9P2E9 1410 aaKnown RBP35.12■■■■□ 3.21
LSM7-203ENST00000585409 PPP1R15AO75807 674 aaPredicted RBP35.11■■■■□ 3.21
LSM7-203ENST00000585409 TBX22Q9Y458 520 aa35.11■■■■□ 3.21
LSM7-203ENST00000585409 NCOA3Q9Y6Q9 1424 aa35.11■■■■□ 3.21
LSM7-203ENST00000585409 IQGAP3Q86VI3 1631 aa35.09■■■■□ 3.21
LSM7-203ENST00000585409 DIP2AQ14689 1571 aa35.08■■■■□ 3.21
LSM7-203ENST00000585409 ADAMTS13Q76LX8 1427 aa35.07■■■■□ 3.21
LSM7-203ENST00000585409 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.07■■■■□ 3.2
LSM7-203ENST00000585409 COL16A1Q07092 1604 aaPredicted RBP35.06■■■■□ 3.2
LSM7-203ENST00000585409 ROCK1Q13464 1354 aa35.05■■■■□ 3.2
LSM7-203ENST00000585409 JCADQ9P266 1359 aa35.05■■■■□ 3.2
LSM7-203ENST00000585409 PIK3R4Q99570 1358 aa35.01■■■■□ 3.2
LSM7-203ENST00000585409 SIPA1L2Q9P2F8 1722 aaPredicted RBP35.01■■■■□ 3.2
LSM7-203ENST00000585409 CHGAP10645 457 aaKnown RBP34.99■■■■□ 3.19
LSM7-203ENST00000585409 NUTM2DQ5VT03 806 aaPredicted RBP34.95■■■■□ 3.19
LSM7-203ENST00000585409 TRPM2O94759 1503 aa34.94■■■■□ 3.18
LSM7-203ENST00000585409 AHDC1Q5TGY3 1603 aaPredicted RBP34.94■■■■□ 3.18
LSM7-203ENST00000585409 ITGAEP38570 1179 aa34.92■■■■□ 3.18
LSM7-203ENST00000585409 SETD1AO15047 1707 aaKnown RBP34.92■■■■□ 3.18
LSM7-203ENST00000585409 CADPS2Q86UW7 1296 aa34.91■■■■□ 3.18
LSM7-203ENST00000585409 C19orf44Q9H6X5 657 aa34.91■■■■□ 3.18
LSM7-203ENST00000585409 C14orf37Q86TY3 774 aa34.9■■■■□ 3.18
LSM7-203ENST00000585409 LRP6O75581 1613 aa34.9■■■■□ 3.18
LSM7-203ENST00000585409 NUP155O75694 1391 aa34.89■■■■□ 3.18
LSM7-203ENST00000585409 SHPRHQ149N8 1683 aa34.89■■■■□ 3.18
LSM7-203ENST00000585409 PTPRUQ92729 1446 aa34.89■■■■□ 3.18
LSM7-203ENST00000585409 SPATA31A6Q5VVP1 1343 aa34.88■■■■□ 3.17
LSM7-203ENST00000585409 NRXN3Q9Y4C0 1643 aa34.88■■■■□ 3.17
LSM7-203ENST00000585409 ATF3P18847 181 aa34.85■■■■□ 3.17
LSM7-203ENST00000585409 XRN1Q8IZH2 1706 aaKnown RBP34.85■■■■□ 3.17
LSM7-203ENST00000585409 SPHKAPQ2M3C7 1700 aa34.84■■■■□ 3.17
LSM7-203ENST00000585409 AMOTL2Q9Y2J4 779 aa34.84■■■■□ 3.17
LSM7-203ENST00000585409 SETBP1Q9Y6X0 1596 aa34.83■■■■□ 3.17
LSM7-203ENST00000585409 DCCP43146 1447 aa34.81■■■■□ 3.16
LSM7-203ENST00000585409 BRINP3Q76B58 766 aa34.77■■■■□ 3.16
LSM7-203ENST00000585409 ZNF772Q68DY9 489 aaPredicted RBP34.73■■■■□ 3.15
LSM7-203ENST00000585409 ASXL1Q8IXJ9 1541 aa34.72■■■■□ 3.15
LSM7-203ENST00000585409 MEX3CQ5U5Q3 659 aaKnown RBP34.72■■■■□ 3.15
LSM7-203ENST00000585409 NHSL1Q5SYE7 1610 aa34.7■■■■□ 3.15
LSM7-203ENST00000585409 MST1RQ04912 1400 aa34.7■■■■□ 3.15
LSM7-203ENST00000585409 METP08581 1390 aa34.68■■■■□ 3.14
LSM7-203ENST00000585409 CLTCL1P53675 1640 aa34.66■■■■□ 3.14
LSM7-203ENST00000585409 NEXMIFQ5QGS0 1516 aa34.66■■■■□ 3.14
LSM7-203ENST00000585409 SETD5Q9C0A6 1442 aa34.66■■■■□ 3.14
LSM7-203ENST00000585409 ZNF326Q5BKZ1 582 aaKnown RBP34.63■■■■□ 3.13
LSM7-203ENST00000585409 NALCNQ8IZF0 1738 aa34.62■■■■□ 3.13
LSM7-203ENST00000585409 ADGRL3Q9HAR2 1447 aa34.61■■■■□ 3.13
LSM7-203ENST00000585409 KIF1BO60333 1816 aa34.6■■■■□ 3.13
LSM7-203ENST00000585409 HFM1A2PYH4 1435 aa34.58■■■■□ 3.13
LSM7-203ENST00000585409 UPF1Q92900 1129 aaKnown RBP eCLIP34.57■■■■□ 3.12
LSM7-203ENST00000585409 TRIM52Q96A61 297 aa34.57■■■■□ 3.12
LSM7-203ENST00000585409 CDK12Q9NYV4 1490 aaPredicted RBP34.57■■■■□ 3.12
LSM7-203ENST00000585409 NUTM2BA6NNL0 878 aaPredicted RBP34.56■■■■□ 3.12
LSM7-203ENST00000585409 NUTM2EB1AL46 878 aaPredicted RBP34.56■■■■□ 3.12
LSM7-203ENST00000585409 NUTM2AQ8IVF1 878 aaPredicted RBP34.56■■■■□ 3.12
LSM7-203ENST00000585409 NAIPQ13075 1403 aa34.55■■■■□ 3.12
LSM7-203ENST00000585409 RXRBP28702 533 aa34.55■■■■□ 3.12
LSM7-203ENST00000585409 LRRC59Q96AG4 307 aaKnown RBP34.53■■■■□ 3.12
LSM7-203ENST00000585409 AFF2P51816 1311 aa34.52■■■■□ 3.12
LSM7-203ENST00000585409 LAMC1P11047 1609 aa34.5■■■■□ 3.11
LSM7-203ENST00000585409 PNPLA6Q8IY17 1366 aa34.49■■■■□ 3.11
LSM7-203ENST00000585409 ACIN1Q9UKV3 1341 aaKnown RBP34.48■■■■□ 3.11
LSM7-203ENST00000585409 DDX17Q92841 729 aaKnown RBP34.47■■■■□ 3.11
LSM7-203ENST00000585409 PTCH1Q13635 1447 aa34.47■■■■□ 3.11
LSM7-203ENST00000585409 C1orf167Q5SNV9 1468 aa34.46■■■■□ 3.11
LSM7-203ENST00000585409 PRAG1Q86YV5 1406 aa34.44■■■■□ 3.1
LSM7-203ENST00000585409 ROBO2Q9HCK4 1378 aa34.39■■■■□ 3.1
LSM7-203ENST00000585409 VGFO15240 615 aaPredicted RBP34.39■■■■□ 3.1
LSM7-203ENST00000585409 C8orf37Q96NL8 207 aa34.38■■■■□ 3.09
LSM7-203ENST00000585409 PPLO60437 1756 aa34.38■■■■□ 3.09
LSM7-203ENST00000585409 RGS12O14924 1447 aa34.37■■■■□ 3.09
LSM7-203ENST00000585409 SOS2Q07890 1332 aaPredicted RBP34.33■■■■□ 3.09
LSM7-203ENST00000585409 RPGRIP1LQ68CZ1 1315 aa34.33■■■■□ 3.09
LSM7-203ENST00000585409 RBM6P78332 1123 aaKnown RBP34.33■■■■□ 3.09
LSM7-203ENST00000585409 QTRT2Q9H974 415 aaKnown RBP34.33■■■■□ 3.09
LSM7-203ENST00000585409 TRIM26Q12899 539 aaPredicted RBP34.31■■■■□ 3.08
LSM7-203ENST00000585409 ORAI2Q96SN7 254 aa34.31■■■■□ 3.08
LSM7-203ENST00000585409 COL22A1Q8NFW1 1626 aaPredicted RBP34.27■■■■□ 3.08
LSM7-203ENST00000585409 ADAMTS2O95450 1211 aa34.26■■■■□ 3.08
LSM7-203ENST00000585409 NGLY1Q96IV0 654 aa34.26■■■■□ 3.08
LSM7-203ENST00000585409 CDC42BPGQ6DT37 1551 aa34.23■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms