RNA–Protein interactions for RNA: ENST00000585315.5

CDH8-214, Transcript of cadherin 8, humanhuman

TSL 5

Gene CDH8, Length 9,076 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-214ENST00000585315 ZNF771Q7L3S4 317 aaPredicted RBP8.91□□□□□ -0.98
CDH8-214ENST00000585315 CSB-PGBD3P0DP91 1061 aa8.91□□□□□ -0.98
CDH8-214ENST00000585315 CRBNQ96SW2 442 aa8.91□□□□□ -0.98
CDH8-214ENST00000585315 MYOM3Q5VTT5 1437 aa8.91□□□□□ -0.98
CDH8-214ENST00000585315 COG6Q9Y2V7 657 aa8.91□□□□□ -0.98
CDH8-214ENST00000585315 CNTLNQ9NXG0 1405 aa8.91□□□□□ -0.98
CDH8-214ENST00000585315 LETM1O95202 739 aaPredicted RBP8.91□□□□□ -0.98
CDH8-214ENST00000585315 CUX1P39880 1505 aa8.91□□□□□ -0.98
CDH8-214ENST00000585315 PAK3O75914 559 aaPredicted RBP8.9□□□□□ -0.98
CDH8-214ENST00000585315 TRIM29Q14134 588 aa8.9□□□□□ -0.98
CDH8-214ENST00000585315 AMER1Q5JTC6 1135 aaPredicted RBP8.9□□□□□ -0.98
CDH8-214ENST00000585315 PDIA4P13667 645 aaKnown RBP8.9□□□□□ -0.98
CDH8-214ENST00000585315 FHOD3Q2V2M9 1422 aa8.9□□□□□ -0.98
CDH8-214ENST00000585315 C22orf23Q9BZE7 217 aa8.9□□□□□ -0.98
CDH8-214ENST00000585315 CCDC39Q9UFE4 941 aa8.9□□□□□ -0.98
CDH8-214ENST00000585315 CCDC66A2RUB6 948 aa8.9□□□□□ -0.98
CDH8-214ENST00000585315 CPLX1O14810 134 aa8.9□□□□□ -0.98
CDH8-214ENST00000585315 NGDNQ8NEJ9 315 aaKnown RBP8.9□□□□□ -0.98
CDH8-214ENST00000585315 RILPL2Q969X0 211 aa8.9□□□□□ -0.98
CDH8-214ENST00000585315 HOMER1Q86YM7 354 aa8.9□□□□□ -0.98
CDH8-214ENST00000585315 CCDC73Q6ZRK6 1079 aa8.9□□□□□ -0.99
CDH8-214ENST00000585315 FAM13BQ9NYF5 915 aa8.9□□□□□ -0.99
CDH8-214ENST00000585315 NASPP49321 788 aaPredicted RBP8.9□□□□□ -0.99
CDH8-214ENST00000585315 NINLQ9Y2I6 1382 aa8.9□□□□□ -0.99
CDH8-214ENST00000585315 NFKBIBQ15653 356 aa8.89□□□□□ -0.99
CDH8-214ENST00000585315 ERC2O15083 957 aa8.89□□□□□ -0.99
CDH8-214ENST00000585315 COG3Q96JB2 828 aa8.89□□□□□ -0.99
CDH8-214ENST00000585315 CWC15Q9P013 229 aaKnown RBP8.89□□□□□ -0.99
CDH8-214ENST00000585315 CCAR2Q8N163 923 aaKnown RBP8.89□□□□□ -0.99
CDH8-214ENST00000585315 GNAI1P63096 354 aa8.89□□□□□ -0.99
CDH8-214ENST00000585315 SASS6Q6UVJ0 657 aa8.89□□□□□ -0.99
CDH8-214ENST00000585315 RUNDC1Q96C34 613 aa8.89□□□□□ -0.99
CDH8-214ENST00000585315 CCDC7Q96M83 1385 aa8.89□□□□□ -0.99
CDH8-214ENST00000585315 APAF1O14727 1248 aa8.89□□□□□ -0.99
CDH8-214ENST00000585315 TRDNQ13061 729 aa8.89□□□□□ -0.99
CDH8-214ENST00000585315 NOL8Q76FK4 1167 aaKnown RBP8.89□□□□□ -0.99
CDH8-214ENST00000585315 FOXD4L1Q9NU39 408 aa8.89□□□□□ -0.99
CDH8-214ENST00000585315 CCP110O43303 1012 aa8.88□□□□□ -0.99
CDH8-214ENST00000585315 TEFQ10587 303 aa8.88□□□□□ -0.99
CDH8-214ENST00000585315 PES1O00541 588 aaKnown RBP8.88□□□□□ -0.99
CDH8-214ENST00000585315 BICD2Q8TD16 824 aa8.88□□□□□ -0.99
CDH8-214ENST00000585315 CADPSQ9ULU8 1353 aa8.88□□□□□ -0.99
CDH8-214ENST00000585315 MARCH6O60337 910 aa8.88□□□□□ -0.99
CDH8-214ENST00000585315 DDX58O95786 925 aaKnown RBP8.88□□□□□ -0.99
CDH8-214ENST00000585315 SMC3Q9UQE7 1217 aa8.88□□□□□ -0.99
CDH8-214ENST00000585315 ERCC4Q92889 916 aaPredicted RBP8.88□□□□□ -0.99
CDH8-214ENST00000585315 TDRD9Q8NDG6 1382 aaKnown RBP8.88□□□□□ -0.99
CDH8-214ENST00000585315 TOMM22Q9NS69 142 aa8.88□□□□□ -0.99
CDH8-214ENST00000585315 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.88□□□□□ -0.99
CDH8-214ENST00000585315 MNS1Q8NEH6 495 aa8.87□□□□□ -0.99
CDH8-214ENST00000585315 AK7Q96M32 723 aa8.87□□□□□ -0.99
CDH8-214ENST00000585315 C9orf78Q9NZ63 289 aaPredicted RBP8.87□□□□□ -0.99
CDH8-214ENST00000585315 KIF7Q2M1P5 1343 aa8.87□□□□□ -0.99
CDH8-214ENST00000585315 PDE3AQ14432 1141 aa8.87□□□□□ -0.99
CDH8-214ENST00000585315 ANO8Q9HCE9 1232 aaPredicted RBP8.87□□□□□ -0.99
CDH8-214ENST00000585315 CT47B1P0C2W7 299 aaPredicted RBP8.87□□□□□ -0.99
CDH8-214ENST00000585315 MCTP1Q6DN14 999 aa8.87□□□□□ -0.99
CDH8-214ENST00000585315 DIAPH1O60610 1272 aaKnown RBP8.87□□□□□ -0.99
CDH8-214ENST00000585315 SAFBQ15424 915 aaKnown RBP eCLIP8.87□□□□□ -0.99
CDH8-214ENST00000585315 CREBRFQ8IUR6 639 aa8.86□□□□□ -0.99
CDH8-214ENST00000585315 RUFY1Q96T51 708 aa8.86□□□□□ -0.99
CDH8-214ENST00000585315 ANO2Q9NQ90 1003 aa8.86□□□□□ -0.99
CDH8-214ENST00000585315 CDC45O75419 566 aa8.86□□□□□ -0.99
CDH8-214ENST00000585315 IFIT2P09913 472 aaKnown RBP8.86□□□□□ -0.99
CDH8-214ENST00000585315 CAVIN1Q6NZI2 390 aaKnown RBP8.86□□□□□ -0.99
CDH8-214ENST00000585315 ZNF330Q9Y3S2 320 aaPredicted RBP8.86□□□□□ -0.99
CDH8-214ENST00000585315 RABEP1Q15276 862 aa8.86□□□□□ -0.99
CDH8-214ENST00000585315 AMOTL1Q8IY63 956 aa8.86□□□□□ -0.99
CDH8-214ENST00000585315 PLIN1O60240 522 aa8.86□□□□□ -0.99
CDH8-214ENST00000585315 FRAT2O75474 233 aaPredicted RBP8.86□□□□□ -0.99
CDH8-214ENST00000585315 DCTN1Q14203 1278 aa8.86□□□□□ -0.99
CDH8-214ENST00000585315 BCL2L13Q9BXK5 485 aa8.86□□□□□ -0.99
CDH8-214ENST00000585315 CALRP27797 417 aaKnown RBP8.85□□□□□ -0.99
CDH8-214ENST00000585315 IFT57Q9NWB7 429 aa8.85□□□□□ -0.99
CDH8-214ENST00000585315 PSMA5P28066 241 aa8.85□□□□□ -0.99
CDH8-214ENST00000585315 ZNF592Q92610 1267 aa8.85□□□□□ -0.99
CDH8-214ENST00000585315 MLECQ14165 292 aa8.85□□□□□ -0.99
CDH8-214ENST00000585315 C1orf141Q5JVX7 400 aa8.85□□□□□ -0.99
CDH8-214ENST00000585315 TRAK1Q9UPV9 953 aa8.85□□□□□ -0.99
CDH8-214ENST00000585315 SCAPERQ9BY12 1400 aa8.85□□□□□ -0.99
CDH8-214ENST00000585315 SLC4A3P48751 1232 aa8.85□□□□□ -0.99
CDH8-214ENST00000585315 RRP7AQ9Y3A4 280 aaKnown RBP8.85□□□□□ -0.99
CDH8-214ENST00000585315 WIZO95785 1651 aa8.85□□□□□ -0.99
CDH8-214ENST00000585315 HNRNPMP52272 730 aaKnown RBP eCLIP8.85□□□□□ -0.99
CDH8-214ENST00000585315 CCDC173Q0VFZ6 552 aa8.85□□□□□ -0.99
CDH8-214ENST00000585315 CIZ1Q9ULV3 898 aaPredicted RBP8.85□□□□□ -0.99
CDH8-214ENST00000585315 FGD6Q6ZV73 1430 aa8.84□□□□□ -0.99
CDH8-214ENST00000585315 GTF2E1P29083 439 aaPredicted RBP8.84□□□□□ -0.99
CDH8-214ENST00000585315 G3BP1Q13283 466 aaKnown RBP eCLIP8.84□□□□□ -0.99
CDH8-214ENST00000585315 CWC22Q9HCG8 908 aaKnown RBP8.84□□□□□ -0.99
CDH8-214ENST00000585315 TRAK2O60296 914 aa8.84□□□□□ -0.99
CDH8-214ENST00000585315 FOXD4L5Q5VV16 416 aaPredicted RBP8.84□□□□□ -0.99
CDH8-214ENST00000585315 FOXD4L4Q8WXT5 416 aaPredicted RBP8.84□□□□□ -0.99
CDH8-214ENST00000585315 VPS37CA5D8V6 355 aaPredicted RBP8.83□□□□□ -1
CDH8-214ENST00000585315 PIP4K2AP48426 406 aaPredicted RBP8.83□□□□□ -1
CDH8-214ENST00000585315 RIPK4P57078 832 aa8.83□□□□□ -1
CDH8-214ENST00000585315 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.83□□□□□ -1
CDH8-214ENST00000585315 HIP1O00291 1037 aa8.83□□□□□ -1
CDH8-214ENST00000585315 ZNF428Q96B54 188 aa8.83□□□□□ -1
CDH8-214ENST00000585315 GNAI3P08754 354 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms