RNA–Protein interactions for RNA: ENST00000585268.1

CRLF3-206, Transcript of cytokine receptor like factor 3, humanhuman

TSL 4

Gene CRLF3, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-206ENST00000585268 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.22□□□□□ -0.77
CRLF3-206ENST00000585268 PTPN5P54829 565 aa10.22□□□□□ -0.77
CRLF3-206ENST00000585268 HPS5Q9UPZ3 1129 aa10.2□□□□□ -0.78
CRLF3-206ENST00000585268 HDGFP51858 240 aaKnown RBP10.19□□□□□ -0.78
CRLF3-206ENST00000585268 NLRP7Q8WX94 980 aa10.19□□□□□ -0.78
CRLF3-206ENST00000585268 WBP1LQ9NX94 342 aa10.19□□□□□ -0.78
CRLF3-206ENST00000585268 TSR3Q9UJK0 312 aaKnown RBP10.19□□□□□ -0.78
CRLF3-206ENST00000585268 KRI1Q8N9T8 703 aaKnown RBP10.18□□□□□ -0.78
CRLF3-206ENST00000585268 RNF40O75150 1001 aa10.17□□□□□ -0.78
CRLF3-206ENST00000585268 SLF2Q8IX21 1173 aa10.17□□□□□ -0.78
CRLF3-206ENST00000585268 PPP4CP60510 307 aa10.14□□□□□ -0.79
CRLF3-206ENST00000585268 NYAP1Q6ZVC0 841 aa10.13□□□□□ -0.79
CRLF3-206ENST00000585268 PLA2G2EQ9NZK7 142 aa10.13□□□□□ -0.79
CRLF3-206ENST00000585268 DAXXQ9UER7 740 aaPredicted RBP10.13□□□□□ -0.79
CRLF3-206ENST00000585268 SLC4A3P48751 1232 aa10.12□□□□□ -0.79
CRLF3-206ENST00000585268 SLC24A3Q9HC58 644 aa10.12□□□□□ -0.79
CRLF3-206ENST00000585268 NECTIN2Q92692 538 aa10.11□□□□□ -0.79
CRLF3-206ENST00000585268 SLC10A3P09131 477 aa10.1□□□□□ -0.79
CRLF3-206ENST00000585268 MDM2Q00987 491 aaPredicted RBP10.1□□□□□ -0.79
CRLF3-206ENST00000585268 APLP1P51693 650 aa10.09□□□□□ -0.79
CRLF3-206ENST00000585268 AMHR2Q16671 573 aa10.09□□□□□ -0.79
CRLF3-206ENST00000585268 AK7Q96M32 723 aa10.09□□□□□ -0.79
CRLF3-206ENST00000585268 TMUB1Q9BVT8 246 aa10.09□□□□□ -0.79
CRLF3-206ENST00000585268 ZCCHC6Q5VYS8 1495 aaKnown RBP10.09□□□□□ -0.79
CRLF3-206ENST00000585268 TRIM66O15016 1216 aa10.08□□□□□ -0.8
CRLF3-206ENST00000585268 NACADO15069 1562 aa10.08□□□□□ -0.8
CRLF3-206ENST00000585268 RB1CC1Q8TDY2 1594 aa10.08□□□□□ -0.8
CRLF3-206ENST00000585268 DDX11L8A8MPP1 907 aa10.07□□□□□ -0.8
CRLF3-206ENST00000585268 REPIN1Q9BWE0 567 aaKnown RBP10.07□□□□□ -0.8
CRLF3-206ENST00000585268 GPCPD1Q9NPB8 672 aa10.07□□□□□ -0.8
CRLF3-206ENST00000585268 CFHP08603 1231 aa10.06□□□□□ -0.8
CRLF3-206ENST00000585268 CLCN1P35523 988 aa10.06□□□□□ -0.8
CRLF3-206ENST00000585268 SULF1Q8IWU6 871 aa10.06□□□□□ -0.8
CRLF3-206ENST00000585268 IFFO2Q5TF58 517 aa10.05□□□□□ -0.8
CRLF3-206ENST00000585268 RDH13Q8NBN7 331 aa10.04□□□□□ -0.8
CRLF3-206ENST00000585268 FAM217BQ9NTX9 383 aaPredicted RBP10.04□□□□□ -0.8
CRLF3-206ENST00000585268 TTLL12Q14166 644 aaPredicted RBP10.03□□□□□ -0.8
CRLF3-206ENST00000585268 PRR14Q9BWN1 585 aa10.03□□□□□ -0.8
CRLF3-206ENST00000585268 ITGBL1O95965 494 aaPredicted RBP10.02□□□□□ -0.81
CRLF3-206ENST00000585268 CD46P15529 392 aa10.02□□□□□ -0.81
CRLF3-206ENST00000585268 KMT5BQ4FZB7 885 aa10.02□□□□□ -0.81
CRLF3-206ENST00000585268 TPRNQ4KMQ1 711 aa10.02□□□□□ -0.81
CRLF3-206ENST00000585268 RSPH4AQ5TD94 716 aa10.02□□□□□ -0.81
CRLF3-206ENST00000585268 PARP9Q8IXQ6 854 aa10.02□□□□□ -0.81
CRLF3-206ENST00000585268 ACTN4O43707 911 aaKnown RBP10.01□□□□□ -0.81
CRLF3-206ENST00000585268 GIGYF2Q6Y7W6 1299 aaKnown RBP10.01□□□□□ -0.81
CRLF3-206ENST00000585268 MYO15BQ96JP2 1530 aa10.01□□□□□ -0.81
CRLF3-206ENST00000585268 PDE4DQ08499 809 aa10□□□□□ -0.81
CRLF3-206ENST00000585268 TJAP1Q5JTD0 557 aa10□□□□□ -0.81
CRLF3-206ENST00000585268 MTRQ99707 1265 aa10□□□□□ -0.81
CRLF3-206ENST00000585268 GCGRP47871 477 aa9.99□□□□□ -0.81
CRLF3-206ENST00000585268 DCAF1Q9Y4B6 1507 aa9.98□□□□□ -0.81
CRLF3-206ENST00000585268 PCDHB3Q9Y5E6 796 aa9.98□□□□□ -0.81
CRLF3-206ENST00000585268 SSTR3P32745 418 aaPredicted RBP9.97□□□□□ -0.81
CRLF3-206ENST00000585268 COPS2P61201 443 aa9.96□□□□□ -0.82
CRLF3-206ENST00000585268 BLOC1S3Q6QNY0 202 aa9.96□□□□□ -0.82
CRLF3-206ENST00000585268 IL21Q9HBE4 155 aa9.96□□□□□ -0.82
CRLF3-206ENST00000585268 KCNC4Q03721 635 aa9.95□□□□□ -0.82
CRLF3-206ENST00000585268 FUT2Q10981 343 aa9.95□□□□□ -0.82
CRLF3-206ENST00000585268 MS4A1P11836 297 aa9.94□□□□□ -0.82
CRLF3-206ENST00000585268 ZNF516Q92618 1163 aa9.94□□□□□ -0.82
CRLF3-206ENST00000585268 PUS10Q3MIT2 529 aaKnown RBP9.93□□□□□ -0.82
CRLF3-206ENST00000585268 A0A0G2JS52 829 aa9.91□□□□□ -0.82
CRLF3-206ENST00000585268 KDM4AO75164 1064 aa9.91□□□□□ -0.82
CRLF3-206ENST00000585268 ZPR1O75312 459 aa9.91□□□□□ -0.82
CRLF3-206ENST00000585268 ATP6V1AP38606 617 aa9.91□□□□□ -0.82
CRLF3-206ENST00000585268 MORN1Q5T089 497 aa9.91□□□□□ -0.82
CRLF3-206ENST00000585268 PRKCSHP14314 528 aaPredicted RBP9.9□□□□□ -0.82
CRLF3-206ENST00000585268 BEGAINQ9BUH8 593 aa9.9□□□□□ -0.82
CRLF3-206ENST00000585268 GPBP1L1Q9HC44 474 aaPredicted RBP9.89□□□□□ -0.83
CRLF3-206ENST00000585268 HOXA2O43364 376 aa9.88□□□□□ -0.83
CRLF3-206ENST00000585268 TLL1O43897 1013 aa9.88□□□□□ -0.83
CRLF3-206ENST00000585268 NR1I2O75469 434 aa9.88□□□□□ -0.83
CRLF3-206ENST00000585268 USP46P62068 366 aa9.88□□□□□ -0.83
CRLF3-206ENST00000585268 SCUBE3Q8IX30 993 aa9.88□□□□□ -0.83
CRLF3-206ENST00000585268 RGS20O76081 388 aa9.87□□□□□ -0.83
CRLF3-206ENST00000585268 NKX2-3Q8TAU0 364 aa9.87□□□□□ -0.83
CRLF3-206ENST00000585268 HLA-CQ95604 372 aa9.87□□□□□ -0.83
CRLF3-206ENST00000585268 SLC27A5Q9Y2P5 690 aa9.87□□□□□ -0.83
CRLF3-206ENST00000585268 GRIPAP1Q4V328 841 aa9.86□□□□□ -0.83
CRLF3-206ENST00000585268 NUTM1Q86Y26 1132 aa9.86□□□□□ -0.83
CRLF3-206ENST00000585268 SPIRE2Q8WWL2 714 aa9.86□□□□□ -0.83
CRLF3-206ENST00000585268 KDM4CQ9H3R0 1056 aa9.86□□□□□ -0.83
CRLF3-206ENST00000585268 THAP11Q96EK4 314 aa9.84□□□□□ -0.83
CRLF3-206ENST00000585268 GUCA2AQ02747 115 aa9.83□□□□□ -0.84
CRLF3-206ENST00000585268 ADH1BP00325 375 aa9.82□□□□□ -0.84
CRLF3-206ENST00000585268 TBC1D2Q9BYX2 928 aa9.82□□□□□ -0.84
CRLF3-206ENST00000585268 SCRIBQ14160 1630 aa9.82□□□□□ -0.84
CRLF3-206ENST00000585268 MOXD2PA6NHM9 499 aa9.81□□□□□ -0.84
CRLF3-206ENST00000585268 BRPF1P55201 1214 aaPredicted RBP9.81□□□□□ -0.84
CRLF3-206ENST00000585268 RNF19BQ6ZMZ0 732 aa9.81□□□□□ -0.84
CRLF3-206ENST00000585268 SALL2Q9Y467 1007 aaPredicted RBP9.81□□□□□ -0.84
CRLF3-206ENST00000585268 UNC13AQ9UPW8 1703 aa9.81□□□□□ -0.84
CRLF3-206ENST00000585268 BICRAQ9NZM4 1560 aa9.8□□□□□ -0.84
CRLF3-206ENST00000585268 NEUROD2Q15784 382 aa9.8□□□□□ -0.84
CRLF3-206ENST00000585268 PPP1R18Q6NYC8 613 aa9.8□□□□□ -0.84
CRLF3-206ENST00000585268 SPSB2Q99619 263 aa9.8□□□□□ -0.84
CRLF3-206ENST00000585268 FAM117AQ9C073 453 aa9.8□□□□□ -0.84
CRLF3-206ENST00000585268 FMNL1O95466 1100 aaPredicted RBP9.79□□□□□ -0.84
CRLF3-206ENST00000585268 NDUFV2P19404 249 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms