RNA–Protein interactions for RNA: ENST00000584960.1

RIOK3-210, Transcript of RIO kinase 3, humanhuman

TSL 2

Gene RIOK3, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-210ENST00000584960 SCAF11Q99590 1463 aaKnown RBP21.56■■□□□ 1.04
RIOK3-210ENST00000584960 NCKAP5LQ9HCH0 1330 aa21.55■■□□□ 1.04
RIOK3-210ENST00000584960 MED14O60244 1454 aa21.55■■□□□ 1.04
RIOK3-210ENST00000584960 ZFYVE9O95405 1425 aa21.55■■□□□ 1.04
RIOK3-210ENST00000584960 SPATA31E1Q6ZUB1 1445 aa21.55■■□□□ 1.04
RIOK3-210ENST00000584960 RIMS2Q9UQ26 1411 aa21.55■■□□□ 1.04
RIOK3-210ENST00000584960 LTKP29376 864 aa21.53■■□□□ 1.04
RIOK3-210ENST00000584960 VGFO15240 615 aaPredicted RBP21.51■■□□□ 1.03
RIOK3-210ENST00000584960 NPHP4O75161 1426 aaPredicted RBP21.51■■□□□ 1.03
RIOK3-210ENST00000584960 PPP1R15AO75807 674 aaPredicted RBP21.5■■□□□ 1.03
RIOK3-210ENST00000584960 STAC3Q96MF2 364 aa21.5■■□□□ 1.03
RIOK3-210ENST00000584960 CLSPNQ9HAW4 1339 aa21.5■■□□□ 1.03
RIOK3-210ENST00000584960 RGL3Q3MIN7 710 aa21.49■■□□□ 1.03
RIOK3-210ENST00000584960 NEXMIFQ5QGS0 1516 aa21.49■■□□□ 1.03
RIOK3-210ENST00000584960 PPLO60437 1756 aa21.48■■□□□ 1.03
RIOK3-210ENST00000584960 PLEKHG1Q9ULL1 1385 aa21.48■■□□□ 1.03
RIOK3-210ENST00000584960 IQGAP1P46940 1657 aa21.47■■□□□ 1.03
RIOK3-210ENST00000584960 IFT172Q9UG01 1749 aa21.44■■□□□ 1.02
RIOK3-210ENST00000584960 BCANQ96GW7 911 aa21.43■■□□□ 1.02
RIOK3-210ENST00000584960 NUTM2DQ5VT03 806 aaPredicted RBP21.42■■□□□ 1.02
RIOK3-210ENST00000584960 SIN3AQ96ST3 1273 aa21.42■■□□□ 1.02
RIOK3-210ENST00000584960 NEUROD1Q13562 356 aa21.4■■□□□ 1.02
RIOK3-210ENST00000584960 CCER1Q8TC90 406 aaPredicted RBP21.4■■□□□ 1.02
RIOK3-210ENST00000584960 TBX22Q9Y458 520 aa21.4■■□□□ 1.02
RIOK3-210ENST00000584960 MYOM2P54296 1465 aa21.39■■□□□ 1.01
RIOK3-210ENST00000584960 DCAF11Q8TEB1 546 aa21.38■■□□□ 1.01
RIOK3-210ENST00000584960 DIP2AQ14689 1571 aa21.38■■□□□ 1.01
RIOK3-210ENST00000584960 SETBP1Q9Y6X0 1596 aa21.38■■□□□ 1.01
RIOK3-210ENST00000584960 SLC26A8Q96RN1 970 aa21.35■■□□□ 1.01
RIOK3-210ENST00000584960 PIK3R4Q99570 1358 aa21.35■■□□□ 1.01
RIOK3-210ENST00000584960 ADGRF5Q8IZF2 1346 aa21.34■■□□□ 1.01
RIOK3-210ENST00000584960 NRXN1Q9ULB1 1477 aa21.34■■□□□ 1.01
RIOK3-210ENST00000584960 TIMELESSQ9UNS1 1208 aa21.34■■□□□ 1.01
RIOK3-210ENST00000584960 ADAMTS13Q76LX8 1427 aa21.34■■□□□ 1.01
RIOK3-210ENST00000584960 NRXN3Q9Y4C0 1643 aa21.33■■□□□ 1
RIOK3-210ENST00000584960 L3MBTL2Q969R5 705 aa21.32■■□□□ 1
RIOK3-210ENST00000584960 KDM2AQ9Y2K7 1162 aa21.32■■□□□ 1
RIOK3-210ENST00000584960 PIK3C2GO75747 1445 aa21.31■■□□□ 1
RIOK3-210ENST00000584960 TONSLQ96HA7 1378 aa21.31■■□□□ 1
RIOK3-210ENST00000584960 KCNA6P17658 529 aa21.3■■□□□ 1
RIOK3-210ENST00000584960 ALKQ9UM73 1620 aa21.29■■□□□ 1
RIOK3-210ENST00000584960 CHD2O14647 1828 aaKnown RBP21.29■■□□□ 1
RIOK3-210ENST00000584960 C14orf93Q9H972 538 aaKnown RBP21.29■■□□□ 1
RIOK3-210ENST00000584960 LAMC1P11047 1609 aa21.29■■□□□ 1
RIOK3-210ENST00000584960 ZNF335Q9H4Z2 1342 aaPredicted RBP21.28■■□□□ 1
RIOK3-210ENST00000584960 SENP3Q9H4L4 574 aaPredicted RBP21.27■■□□□ 1
RIOK3-210ENST00000584960 CPS1P31327 1500 aa21.26■□□□□ 0.99
RIOK3-210ENST00000584960 SETD1AO15047 1707 aaKnown RBP21.25■□□□□ 0.99
RIOK3-210ENST00000584960 LTBP4Q8N2S1 1624 aa21.24■□□□□ 0.99
RIOK3-210ENST00000584960 KIAA1210Q9ULL0 1709 aa21.24■□□□□ 0.99
RIOK3-210ENST00000584960 NWD1Q149M9 1564 aa21.23■□□□□ 0.99
RIOK3-210ENST00000584960 METP08581 1390 aa21.23■□□□□ 0.99
RIOK3-210ENST00000584960 PRAG1Q86YV5 1406 aa21.22■□□□□ 0.99
RIOK3-210ENST00000584960 CFAP70Q5T0N1 1121 aa21.22■□□□□ 0.99
RIOK3-210ENST00000584960 AMOTL2Q9Y2J4 779 aa21.22■□□□□ 0.99
RIOK3-210ENST00000584960 STRCP1A6NGW2 1772 aa21.21■□□□□ 0.99
RIOK3-210ENST00000584960 NKTRP30414 1462 aaKnown RBP21.2■□□□□ 0.98
RIOK3-210ENST00000584960 PTPRUQ92729 1446 aa21.18■□□□□ 0.98
RIOK3-210ENST00000584960 XRN1Q8IZH2 1706 aaKnown RBP21.17■□□□□ 0.98
RIOK3-210ENST00000584960 IQSEC2Q5JU85 1478 aa21.16■□□□□ 0.98
RIOK3-210ENST00000584960 LRPPRCP42704 1394 aaKnown RBP21.16■□□□□ 0.98
RIOK3-210ENST00000584960 ABCC11Q96J66 1382 aa21.16■□□□□ 0.98
RIOK3-210ENST00000584960 PROSER2Q86WR7 435 aaPredicted RBP21.16■□□□□ 0.98
RIOK3-210ENST00000584960 CERKQ8TCT0 537 aa21.16■□□□□ 0.98
RIOK3-210ENST00000584960 NCOA3Q9Y6Q9 1424 aa21.15■□□□□ 0.98
RIOK3-210ENST00000584960 TMEM132EQ6IEE7 984 aa21.15■□□□□ 0.98
RIOK3-210ENST00000584960 SIRT1Q96EB6 747 aa21.15■□□□□ 0.98
RIOK3-210ENST00000584960 LRRC7Q96NW7 1537 aa21.14■□□□□ 0.98
RIOK3-210ENST00000584960 YTHDC2Q9H6S0 1430 aaKnown RBP21.13■□□□□ 0.97
RIOK3-210ENST00000584960 ADGRB1O14514 1584 aa21.13■□□□□ 0.97
RIOK3-210ENST00000584960 TECPR2O15040 1411 aa21.12■□□□□ 0.97
RIOK3-210ENST00000584960 KNDC1Q76NI1 1749 aa21.12■□□□□ 0.97
RIOK3-210ENST00000584960 ASXL1Q8IXJ9 1541 aa21.12■□□□□ 0.97
RIOK3-210ENST00000584960 PTCH1Q13635 1447 aa21.12■□□□□ 0.97
RIOK3-210ENST00000584960 TRPM1Q7Z4N2 1603 aa21.11■□□□□ 0.97
RIOK3-210ENST00000584960 NBPF8Q3BBV2 869 aa21.11■□□□□ 0.97
RIOK3-210ENST00000584960 STK26Q9P289 416 aa21.1■□□□□ 0.97
RIOK3-210ENST00000584960 TMEM94Q12767 1356 aa21.1■□□□□ 0.97
RIOK3-210ENST00000584960 DLC1Q96QB1 1528 aa21.09■□□□□ 0.97
RIOK3-210ENST00000584960 NBPF1Q3BBV0 1214 aa21.08■□□□□ 0.97
RIOK3-210ENST00000584960 FAM135BQ49AJ0 1406 aa21.08■□□□□ 0.97
RIOK3-210ENST00000584960 XIRP1Q702N8 1843 aaKnown RBP21.08■□□□□ 0.96
RIOK3-210ENST00000584960 ROCK2O75116 1388 aaKnown RBP21.06■□□□□ 0.96
RIOK3-210ENST00000584960 ROBO2Q9HCK4 1378 aa21.06■□□□□ 0.96
RIOK3-210ENST00000584960 GPRASP1Q5JY77 1395 aa21.05■□□□□ 0.96
RIOK3-210ENST00000584960 RALGAPBQ86X10 1494 aa21.05■□□□□ 0.96
RIOK3-210ENST00000584960 C19orf44Q9H6X5 657 aa21.04■□□□□ 0.96
RIOK3-210ENST00000584960 TRAK1Q9UPV9 953 aa21.04■□□□□ 0.96
RIOK3-210ENST00000584960 C14orf37Q86TY3 774 aa21.03■□□□□ 0.96
RIOK3-210ENST00000584960 MSH6P52701 1360 aa21.02■□□□□ 0.96
RIOK3-210ENST00000584960 POGKQ9P215 609 aa21.01■□□□□ 0.95
RIOK3-210ENST00000584960 TOM1O60784 492 aa21■□□□□ 0.95
RIOK3-210ENST00000584960 RBM33Q96EV2 1170 aaKnown RBP21■□□□□ 0.95
RIOK3-210ENST00000584960 CARD11Q9BXL7 1154 aa21■□□□□ 0.95
RIOK3-210ENST00000584960 ARHGEF28Q8N1W1 1705 aaKnown RBP20.99■□□□□ 0.95
RIOK3-210ENST00000584960 ADGRL3Q9HAR2 1447 aa20.99■□□□□ 0.95
RIOK3-210ENST00000584960 WAPLQ7Z5K2 1190 aa20.99■□□□□ 0.95
RIOK3-210ENST00000584960 PRAM1Q96QH2 718 aa20.99■□□□□ 0.95
RIOK3-210ENST00000584960 DCCP43146 1447 aa20.98■□□□□ 0.95
RIOK3-210ENST00000584960 CADPS2Q86UW7 1296 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms