RNA–Protein interactions for RNA: ENST00000584888.1

ERBB2-221, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-221ENST00000584888 ZFYVE9O95405 1425 aa27.01■■□□□ 1.91
ERBB2-221ENST00000584888 CHGAP10645 457 aaKnown RBP27.01■■□□□ 1.91
ERBB2-221ENST00000584888 HDGFP51858 240 aaKnown RBP27.01■■□□□ 1.91
ERBB2-221ENST00000584888 SENP3Q9H4L4 574 aaPredicted RBP27.01■■□□□ 1.91
ERBB2-221ENST00000584888 SOCS7O14512 581 aa27■■□□□ 1.91
ERBB2-221ENST00000584888 E9PCH4 1651 aa27■■□□□ 1.91
ERBB2-221ENST00000584888 RIMS2Q9UQ26 1411 aa26.99■■□□□ 1.91
ERBB2-221ENST00000584888 TMEM94Q12767 1356 aa26.99■■□□□ 1.91
ERBB2-221ENST00000584888 TMEM131LA2VDJ0 1609 aa26.99■■□□□ 1.91
ERBB2-221ENST00000584888 XIRP1Q702N8 1843 aaKnown RBP26.99■■□□□ 1.91
ERBB2-221ENST00000584888 PPP1R15AO75807 674 aaPredicted RBP26.98■■□□□ 1.91
ERBB2-221ENST00000584888 PROSER2Q86WR7 435 aaPredicted RBP26.98■■□□□ 1.91
ERBB2-221ENST00000584888 PLEKHG1Q9ULL1 1385 aa26.97■■□□□ 1.91
ERBB2-221ENST00000584888 HFM1A2PYH4 1435 aa26.97■■□□□ 1.91
ERBB2-221ENST00000584888 MYO5BQ9ULV0 1848 aa26.97■■□□□ 1.91
ERBB2-221ENST00000584888 RBM33Q96EV2 1170 aaKnown RBP26.96■■□□□ 1.91
ERBB2-221ENST00000584888 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.95■■□□□ 1.9
ERBB2-221ENST00000584888 MED1Q15648 1581 aaPredicted RBP26.93■■□□□ 1.9
ERBB2-221ENST00000584888 NUTM2DQ5VT03 806 aaPredicted RBP26.91■■□□□ 1.9
ERBB2-221ENST00000584888 NWD1Q149M9 1564 aa26.9■■□□□ 1.9
ERBB2-221ENST00000584888 NKTRP30414 1462 aaKnown RBP26.9■■□□□ 1.9
ERBB2-221ENST00000584888 TBX22Q9Y458 520 aa26.9■■□□□ 1.9
ERBB2-221ENST00000584888 FAM135BQ49AJ0 1406 aa26.88■■□□□ 1.89
ERBB2-221ENST00000584888 ADAMTS13Q76LX8 1427 aa26.83■■□□□ 1.89
ERBB2-221ENST00000584888 MSH6P52701 1360 aa26.83■■□□□ 1.88
ERBB2-221ENST00000584888 CHD2O14647 1828 aaKnown RBP26.82■■□□□ 1.88
ERBB2-221ENST00000584888 PHF23Q9BUL5 403 aaPredicted RBP26.81■■□□□ 1.88
ERBB2-221ENST00000584888 SPHKAPQ2M3C7 1700 aa26.79■■□□□ 1.88
ERBB2-221ENST00000584888 PIK3R4Q99570 1358 aa26.77■■□□□ 1.88
ERBB2-221ENST00000584888 SLAIN2Q9P270 581 aa26.77■■□□□ 1.88
ERBB2-221ENST00000584888 DIP2AQ14689 1571 aa26.75■■□□□ 1.87
ERBB2-221ENST00000584888 ZNF326Q5BKZ1 582 aaKnown RBP26.75■■□□□ 1.87
ERBB2-221ENST00000584888 TRIM52Q96A61 297 aa26.75■■□□□ 1.87
ERBB2-221ENST00000584888 NCOA3Q9Y6Q9 1424 aa26.74■■□□□ 1.87
ERBB2-221ENST00000584888 ROBO1Q9Y6N7 1651 aa26.74■■□□□ 1.87
ERBB2-221ENST00000584888 C14orf37Q86TY3 774 aa26.73■■□□□ 1.87
ERBB2-221ENST00000584888 AMOTL2Q9Y2J4 779 aa26.72■■□□□ 1.87
ERBB2-221ENST00000584888 TRPM2O94759 1503 aa26.7■■□□□ 1.86
ERBB2-221ENST00000584888 PTPRUQ92729 1446 aa26.69■■□□□ 1.86
ERBB2-221ENST00000584888 SLC4A1APQ9BWU0 796 aaKnown RBP26.68■■□□□ 1.86
ERBB2-221ENST00000584888 C19orf44Q9H6X5 657 aa26.68■■□□□ 1.86
ERBB2-221ENST00000584888 SETD5Q9C0A6 1442 aa26.67■■□□□ 1.86
ERBB2-221ENST00000584888 CLTCL1P53675 1640 aa26.67■■□□□ 1.86
ERBB2-221ENST00000584888 CADPS2Q86UW7 1296 aa26.65■■□□□ 1.86
ERBB2-221ENST00000584888 SETBP1Q9Y6X0 1596 aa26.65■■□□□ 1.86
ERBB2-221ENST00000584888 ATF3P18847 181 aa26.64■■□□□ 1.86
ERBB2-221ENST00000584888 RGS17Q9UGC6 210 aaPredicted RBP26.64■■□□□ 1.86
ERBB2-221ENST00000584888 NRXN3Q9Y4C0 1643 aa26.64■■□□□ 1.85
ERBB2-221ENST00000584888 ACIN1Q9UKV3 1341 aaKnown RBP26.63■■□□□ 1.85
ERBB2-221ENST00000584888 METP08581 1390 aa26.61■■□□□ 1.85
ERBB2-221ENST00000584888 NEXMIFQ5QGS0 1516 aa26.6■■□□□ 1.85
ERBB2-221ENST00000584888 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.6■■□□□ 1.85
ERBB2-221ENST00000584888 MPHOSPH9Q99550 1183 aa26.6■■□□□ 1.85
ERBB2-221ENST00000584888 KIF1BO60333 1816 aa26.6■■□□□ 1.85
ERBB2-221ENST00000584888 PHLPP1O60346 1717 aa26.57■■□□□ 1.84
ERBB2-221ENST00000584888 XRN1Q8IZH2 1706 aaKnown RBP26.56■■□□□ 1.84
ERBB2-221ENST00000584888 RAB3GAP2Q9H2M9 1393 aa26.56■■□□□ 1.84
ERBB2-221ENST00000584888 JCADQ9P266 1359 aa26.56■■□□□ 1.84
ERBB2-221ENST00000584888 VGFO15240 615 aaPredicted RBP26.55■■□□□ 1.84
ERBB2-221ENST00000584888 FOXD1Q16676 465 aa26.55■■□□□ 1.84
ERBB2-221ENST00000584888 DCCP43146 1447 aa26.52■■□□□ 1.84
ERBB2-221ENST00000584888 RPGRIP1LQ68CZ1 1315 aa26.52■■□□□ 1.84
ERBB2-221ENST00000584888 BRINP3Q76B58 766 aa26.51■■□□□ 1.83
ERBB2-221ENST00000584888 COL16A1Q07092 1604 aaPredicted RBP26.5■■□□□ 1.83
ERBB2-221ENST00000584888 HRCP23327 699 aa26.5■■□□□ 1.83
ERBB2-221ENST00000584888 POTEAQ6S8J7 498 aa26.48■■□□□ 1.83
ERBB2-221ENST00000584888 AHDC1Q5TGY3 1603 aaPredicted RBP26.47■■□□□ 1.83
ERBB2-221ENST00000584888 MST1RQ04912 1400 aa26.45■■□□□ 1.82
ERBB2-221ENST00000584888 ADGRL3Q9HAR2 1447 aa26.44■■□□□ 1.82
ERBB2-221ENST00000584888 SPATA31A6Q5VVP1 1343 aa26.43■■□□□ 1.82
ERBB2-221ENST00000584888 CCDC144AA2RUR9 1427 aa26.43■■□□□ 1.82
ERBB2-221ENST00000584888 SPATA31E1Q6ZUB1 1445 aa26.41■■□□□ 1.82
ERBB2-221ENST00000584888 PPLO60437 1756 aa26.41■■□□□ 1.82
ERBB2-221ENST00000584888 ASXL1Q8IXJ9 1541 aa26.4■■□□□ 1.82
ERBB2-221ENST00000584888 ROBO2Q9HCK4 1378 aa26.4■■□□□ 1.82
ERBB2-221ENST00000584888 SETD1AO15047 1707 aaKnown RBP26.39■■□□□ 1.81
ERBB2-221ENST00000584888 PTCH1Q13635 1447 aa26.39■■□□□ 1.81
ERBB2-221ENST00000584888 RGL3Q3MIN7 710 aa26.38■■□□□ 1.81
ERBB2-221ENST00000584888 LRP6O75581 1613 aa26.37■■□□□ 1.81
ERBB2-221ENST00000584888 NALCNQ8IZF0 1738 aa26.36■■□□□ 1.81
ERBB2-221ENST00000584888 ADGRF5Q8IZF2 1346 aa26.36■■□□□ 1.81
ERBB2-221ENST00000584888 MEX3CQ5U5Q3 659 aaKnown RBP26.35■■□□□ 1.81
ERBB2-221ENST00000584888 PRAG1Q86YV5 1406 aa26.34■■□□□ 1.81
ERBB2-221ENST00000584888 SHPRHQ149N8 1683 aa26.34■■□□□ 1.81
ERBB2-221ENST00000584888 DDX17Q92841 729 aaKnown RBP26.33■■□□□ 1.81
ERBB2-221ENST00000584888 IFT172Q9UG01 1749 aa26.33■■□□□ 1.81
ERBB2-221ENST00000584888 ANKRD30BQ9BXX2 1392 aa26.33■■□□□ 1.8
ERBB2-221ENST00000584888 LRRC59Q96AG4 307 aaKnown RBP26.32■■□□□ 1.8
ERBB2-221ENST00000584888 C1orf167Q5SNV9 1468 aa26.31■■□□□ 1.8
ERBB2-221ENST00000584888 NUTM2BA6NNL0 878 aaPredicted RBP26.31■■□□□ 1.8
ERBB2-221ENST00000584888 NUTM2EB1AL46 878 aaPredicted RBP26.31■■□□□ 1.8
ERBB2-221ENST00000584888 NUTM2AQ8IVF1 878 aaPredicted RBP26.31■■□□□ 1.8
ERBB2-221ENST00000584888 NHSL1Q5SYE7 1610 aa26.3■■□□□ 1.8
ERBB2-221ENST00000584888 ZNF772Q68DY9 489 aaPredicted RBP26.28■■□□□ 1.8
ERBB2-221ENST00000584888 ORAI2Q96SN7 254 aa26.27■■□□□ 1.8
ERBB2-221ENST00000584888 STK26Q9P289 416 aa26.26■■□□□ 1.79
ERBB2-221ENST00000584888 TMEM132EQ6IEE7 984 aa26.23■■□□□ 1.79
ERBB2-221ENST00000584888 PNPLA6Q8IY17 1366 aa26.22■■□□□ 1.79
ERBB2-221ENST00000584888 LRPPRCP42704 1394 aaKnown RBP26.21■■□□□ 1.79
ERBB2-221ENST00000584888 WAPLQ7Z5K2 1190 aa26.21■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms