RNA–Protein interactions for RNA: ENST00000584668.5

SRSF1-207, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 3

Gene SRSF1, Length 758 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-207ENST00000584668 MEX3CQ5U5Q3 659 aaKnown RBP13.26□□□□□ -0.29
SRSF1-207ENST00000584668 SLC26A8Q96RN1 970 aa13.26□□□□□ -0.29
SRSF1-207ENST00000584668 SLC52A1Q9NWF4 448 aa13.26□□□□□ -0.29
SRSF1-207ENST00000584668 GCC2Q8IWJ2 1684 aa13.25□□□□□ -0.29
SRSF1-207ENST00000584668 COL16A1Q07092 1604 aaPredicted RBP13.25□□□□□ -0.29
SRSF1-207ENST00000584668 FGD6Q6ZV73 1430 aa13.25□□□□□ -0.29
SRSF1-207ENST00000584668 SPATA31A6Q5VVP1 1343 aa13.25□□□□□ -0.29
SRSF1-207ENST00000584668 SHPRHQ149N8 1683 aa13.24□□□□□ -0.29
SRSF1-207ENST00000584668 NOS1P29475 1434 aa13.24□□□□□ -0.29
SRSF1-207ENST00000584668 NCOA3Q9Y6Q9 1424 aa13.24□□□□□ -0.29
SRSF1-207ENST00000584668 IDI1Q13907 227 aa13.24□□□□□ -0.29
SRSF1-207ENST00000584668 ZNF772Q68DY9 489 aaPredicted RBP13.24□□□□□ -0.29
SRSF1-207ENST00000584668 SLAIN2Q9P270 581 aa13.24□□□□□ -0.29
SRSF1-207ENST00000584668 DIP2AQ14689 1571 aa13.24□□□□□ -0.29
SRSF1-207ENST00000584668 PLEKHG1Q9ULL1 1385 aa13.23□□□□□ -0.29
SRSF1-207ENST00000584668 MYO5BQ9ULV0 1848 aa13.23□□□□□ -0.29
SRSF1-207ENST00000584668 C14orf37Q86TY3 774 aa13.23□□□□□ -0.29
SRSF1-207ENST00000584668 AHDC1Q5TGY3 1603 aaPredicted RBP13.21□□□□□ -0.29
SRSF1-207ENST00000584668 KANK4Q5T7N3 995 aaPredicted RBP13.2□□□□□ -0.3
SRSF1-207ENST00000584668 CADPS2Q86UW7 1296 aa13.2□□□□□ -0.3
SRSF1-207ENST00000584668 RBM33Q96EV2 1170 aaKnown RBP13.2□□□□□ -0.3
SRSF1-207ENST00000584668 ATF3P18847 181 aa13.19□□□□□ -0.3
SRSF1-207ENST00000584668 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.19□□□□□ -0.3
SRSF1-207ENST00000584668 ZFYVE9O95405 1425 aa13.19□□□□□ -0.3
SRSF1-207ENST00000584668 RIMS2Q9UQ26 1411 aa13.19□□□□□ -0.3
SRSF1-207ENST00000584668 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.19□□□□□ -0.3
SRSF1-207ENST00000584668 ADGRL2O95490 1459 aa13.18□□□□□ -0.3
SRSF1-207ENST00000584668 TMEM131LA2VDJ0 1609 aa13.18□□□□□ -0.3
SRSF1-207ENST00000584668 PIK3R4Q99570 1358 aa13.18□□□□□ -0.3
SRSF1-207ENST00000584668 TRPM2O94759 1503 aa13.18□□□□□ -0.3
SRSF1-207ENST00000584668 CDK12Q9NYV4 1490 aaPredicted RBP13.16□□□□□ -0.3
SRSF1-207ENST00000584668 CHIC2Q9UKJ5 165 aa13.16□□□□□ -0.3
SRSF1-207ENST00000584668 LRP6O75581 1613 aa13.16□□□□□ -0.3
SRSF1-207ENST00000584668 ANKRD50Q9ULJ7 1429 aa13.15□□□□□ -0.3
SRSF1-207ENST00000584668 TRIM52Q96A61 297 aa13.15□□□□□ -0.3
SRSF1-207ENST00000584668 TBX22Q9Y458 520 aa13.15□□□□□ -0.3
SRSF1-207ENST00000584668 DCCP43146 1447 aa13.14□□□□□ -0.31
SRSF1-207ENST00000584668 RXRBP28702 533 aa13.14□□□□□ -0.31
SRSF1-207ENST00000584668 UPF1Q92900 1129 aaKnown RBP eCLIP13.14□□□□□ -0.311e-16■□□□□ 9.5
SRSF1-207ENST00000584668 C19orf44Q9H6X5 657 aa13.14□□□□□ -0.31
SRSF1-207ENST00000584668 UNC13BO14795 1591 aa13.14□□□□□ -0.31
SRSF1-207ENST00000584668 CHGAP10645 457 aaKnown RBP13.12□□□□□ -0.31
SRSF1-207ENST00000584668 FOXD1Q16676 465 aa13.12□□□□□ -0.31
SRSF1-207ENST00000584668 E9PCH4 1651 aa13.11□□□□□ -0.31
SRSF1-207ENST00000584668 NHSL1Q5SYE7 1610 aa13.1□□□□□ -0.31
SRSF1-207ENST00000584668 ASXL1Q8IXJ9 1541 aa13.1□□□□□ -0.31
SRSF1-207ENST00000584668 ADAMTS13Q76LX8 1427 aa13.09□□□□□ -0.31
SRSF1-207ENST00000584668 IQGAP3Q86VI3 1631 aa13.09□□□□□ -0.31
SRSF1-207ENST00000584668 NUTM2BA6NNL0 878 aaPredicted RBP13.08□□□□□ -0.32
SRSF1-207ENST00000584668 NUTM2EB1AL46 878 aaPredicted RBP13.08□□□□□ -0.32
SRSF1-207ENST00000584668 FAM50AQ14320 339 aaKnown RBP13.08□□□□□ -0.32
SRSF1-207ENST00000584668 NUTM2AQ8IVF1 878 aaPredicted RBP13.08□□□□□ -0.32
SRSF1-207ENST00000584668 XRN1Q8IZH2 1706 aaKnown RBP13.08□□□□□ -0.32
SRSF1-207ENST00000584668 SETD5Q9C0A6 1442 aa13.07□□□□□ -0.32
SRSF1-207ENST00000584668 BRINP3Q76B58 766 aa13.06□□□□□ -0.32
SRSF1-207ENST00000584668 AFF2P51816 1311 aa13.06□□□□□ -0.32
SRSF1-207ENST00000584668 LRRC59Q96AG4 307 aaKnown RBP13.05□□□□□ -0.32
SRSF1-207ENST00000584668 AMOTL2Q9Y2J4 779 aa13.05□□□□□ -0.32
SRSF1-207ENST00000584668 SETBP1Q9Y6X0 1596 aa13.05□□□□□ -0.32
SRSF1-207ENST00000584668 SPHKAPQ2M3C7 1700 aa13.05□□□□□ -0.32
SRSF1-207ENST00000584668 NGLY1Q96IV0 654 aa13.04□□□□□ -0.32
SRSF1-207ENST00000584668 LOC105371045A0A1W2PR82 267 aa13.03□□□□□ -0.32
SRSF1-207ENST00000584668 RBM6P78332 1123 aaKnown RBP13.03□□□□□ -0.32
SRSF1-207ENST00000584668 NUTM2DQ5VT03 806 aaPredicted RBP13.03□□□□□ -0.32
SRSF1-207ENST00000584668 C8orf37Q96NL8 207 aa13.03□□□□□ -0.32
SRSF1-207ENST00000584668 ATAD2Q6PL18 1390 aa13.03□□□□□ -0.32
SRSF1-207ENST00000584668 RGS12O14924 1447 aa13.03□□□□□ -0.32
SRSF1-207ENST00000584668 MST1RQ04912 1400 aa13.03□□□□□ -0.32
SRSF1-207ENST00000584668 ROCK1Q13464 1354 aa13.01□□□□□ -0.33
SRSF1-207ENST00000584668 ADGRL3Q9HAR2 1447 aa13.01□□□□□ -0.33
SRSF1-207ENST00000584668 NRXN3Q9Y4C0 1643 aa13.01□□□□□ -0.33
SRSF1-207ENST00000584668 NALCNQ8IZF0 1738 aa13.01□□□□□ -0.33
SRSF1-207ENST00000584668 SRCAPQ6ZRS2 3230 aa13□□□□□ -0.33
SRSF1-207ENST00000584668 PTPRUQ92729 1446 aa12.99□□□□□ -0.33
SRSF1-207ENST00000584668 PNPLA6Q8IY17 1366 aa12.99□□□□□ -0.33
SRSF1-207ENST00000584668 ZNF326Q5BKZ1 582 aaKnown RBP12.99□□□□□ -0.33
SRSF1-207ENST00000584668 QTRT2Q9H974 415 aaKnown RBP12.99□□□□□ -0.33
SRSF1-207ENST00000584668 NUP155O75694 1391 aa12.98□□□□□ -0.33
SRSF1-207ENST00000584668 KIF1BO60333 1816 aa12.98□□□□□ -0.33
SRSF1-207ENST00000584668 LAMC1P11047 1609 aa12.98□□□□□ -0.33
SRSF1-207ENST00000584668 PTCH1Q13635 1447 aa12.96□□□□□ -0.34
SRSF1-207ENST00000584668 ZRANB1Q9UGI0 708 aa12.95□□□□□ -0.34
SRSF1-207ENST00000584668 TRPC5Q9UL62 973 aaPredicted RBP12.95□□□□□ -0.34
SRSF1-207ENST00000584668 ADAMTS2O95450 1211 aa12.94□□□□□ -0.34
SRSF1-207ENST00000584668 USP21Q9UK80 565 aa12.94□□□□□ -0.34
SRSF1-207ENST00000584668 COL22A1Q8NFW1 1626 aaPredicted RBP12.94□□□□□ -0.34
SRSF1-207ENST00000584668 EP400Q96L91 3159 aa12.93□□□□□ -0.34
SRSF1-207ENST00000584668 C1orf167Q5SNV9 1468 aa12.93□□□□□ -0.34
SRSF1-207ENST00000584668 MARF1Q9Y4F3 1742 aaKnown RBP12.93□□□□□ -0.34
SRSF1-207ENST00000584668 METP08581 1390 aa12.93□□□□□ -0.34
SRSF1-207ENST00000584668 NEXMIFQ5QGS0 1516 aa12.93□□□□□ -0.34
SRSF1-207ENST00000584668 CCDC125Q86Z20 511 aa12.91□□□□□ -0.34
SRSF1-207ENST00000584668 CLTCL1P53675 1640 aa12.91□□□□□ -0.34
SRSF1-207ENST00000584668 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.89□□□□□ -0.35
SRSF1-207ENST00000584668 DDX17Q92841 729 aaKnown RBP12.89□□□□□ -0.35
SRSF1-207ENST00000584668 SOS2Q07890 1332 aaPredicted RBP12.88□□□□□ -0.35
SRSF1-207ENST00000584668 HFM1A2PYH4 1435 aa12.88□□□□□ -0.35
SRSF1-207ENST00000584668 ATRNO75882 1429 aa12.88□□□□□ -0.35
SRSF1-207ENST00000584668 LRPPRCP42704 1394 aaKnown RBP12.88□□□□□ -0.35
SRSF1-207ENST00000584668 CDC42BPGQ6DT37 1551 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms