RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 ERICH6Q7L0X2 663 aa13.65□□□□□ -0.22
RFFL-212ENST00000584655 ZRANB1Q9UGI0 708 aa13.65□□□□□ -0.22
RFFL-212ENST00000584655 RIMBP3CA6NJZ7 1639 aa13.65□□□□□ -0.23
RFFL-212ENST00000584655 RIMBP3BA6NNM3 1639 aa13.65□□□□□ -0.23
RFFL-212ENST00000584655 RIMBP3Q9UFD9 1639 aa13.65□□□□□ -0.23
RFFL-212ENST00000584655 PAK3O75914 559 aaPredicted RBP13.64□□□□□ -0.23
RFFL-212ENST00000584655 CABP1Q9NZU7 370 aa13.64□□□□□ -0.23
RFFL-212ENST00000584655 VGFO15240 615 aaPredicted RBP13.64□□□□□ -0.23
RFFL-212ENST00000584655 CARD14Q9BXL6 1004 aa13.64□□□□□ -0.23
RFFL-212ENST00000584655 PRAG1Q86YV5 1406 aa13.64□□□□□ -0.23
RFFL-212ENST00000584655 PPP2R1AP30153 589 aa13.63□□□□□ -0.23
RFFL-212ENST00000584655 LTV1Q96GA3 475 aaPredicted RBP13.63□□□□□ -0.23
RFFL-212ENST00000584655 GCC2Q8IWJ2 1684 aa13.63□□□□□ -0.23
RFFL-212ENST00000584655 ADGRL2O95490 1459 aa13.63□□□□□ -0.23
RFFL-212ENST00000584655 XPCQ01831 940 aaPredicted RBP13.62□□□□□ -0.23
RFFL-212ENST00000584655 HMOX1P09601 288 aa13.62□□□□□ -0.23
RFFL-212ENST00000584655 MTHFSP49914 203 aa13.62□□□□□ -0.23
RFFL-212ENST00000584655 ZNF428Q96B54 188 aa13.62□□□□□ -0.23
RFFL-212ENST00000584655 TSHZ2Q9NRE2 1034 aa13.62□□□□□ -0.23
RFFL-212ENST00000584655 EXOC6Q8TAG9 804 aa13.62□□□□□ -0.23
RFFL-212ENST00000584655 CLASP1Q7Z460 1538 aa13.6□□□□□ -0.23
RFFL-212ENST00000584655 RALBP1Q15311 655 aa13.59□□□□□ -0.23
RFFL-212ENST00000584655 SPATA31E1Q6ZUB1 1445 aa13.59□□□□□ -0.23
RFFL-212ENST00000584655 PER1O15534 1290 aaPredicted RBP13.59□□□□□ -0.23
RFFL-212ENST00000584655 CDCA8Q53HL2 280 aa13.59□□□□□ -0.23
RFFL-212ENST00000584655 RRS1Q15050 365 aaKnown RBP13.58□□□□□ -0.24
RFFL-212ENST00000584655 RCAN3Q9UKA8 241 aa13.57□□□□□ -0.24
RFFL-212ENST00000584655 ATP7AQ04656 1500 aa13.57□□□□□ -0.24
RFFL-212ENST00000584655 C20orf194Q5TEA3 1177 aa13.57□□□□□ -0.24
RFFL-212ENST00000584655 CDK19Q9BWU1 502 aa13.57□□□□□ -0.24
RFFL-212ENST00000584655 PREX2Q70Z35 1606 aa13.57□□□□□ -0.24
RFFL-212ENST00000584655 DUOX2Q9NRD8 1548 aa13.57□□□□□ -0.24
RFFL-212ENST00000584655 RGS3P49796 1198 aa13.57□□□□□ -0.24
RFFL-212ENST00000584655 MYO5CQ9NQX4 1742 aa13.57□□□□□ -0.24
RFFL-212ENST00000584655 THUMPD2Q9BTF0 503 aaKnown RBP13.56□□□□□ -0.24
RFFL-212ENST00000584655 NUDCQ9Y266 331 aa13.56□□□□□ -0.24
RFFL-212ENST00000584655 DMRT2Q9Y5R5 561 aa13.56□□□□□ -0.24
RFFL-212ENST00000584655 NPATQ14207 1427 aa13.56□□□□□ -0.24
RFFL-212ENST00000584655 ATP10AO60312 1499 aa13.54□□□□□ -0.24
RFFL-212ENST00000584655 ABCC1P33527 1531 aa13.54□□□□□ -0.24
RFFL-212ENST00000584655 SHANK2Q9UPX8 1470 aa13.54□□□□□ -0.24
RFFL-212ENST00000584655 ZBED9Q6R2W3 1325 aa13.54□□□□□ -0.24
RFFL-212ENST00000584655 ZNF518AQ6AHZ1 1483 aa13.54□□□□□ -0.24
RFFL-212ENST00000584655 SPINK5Q9NQ38 1064 aaPredicted RBP13.54□□□□□ -0.24
RFFL-212ENST00000584655 BCORL1Q5H9F3 1711 aa13.53□□□□□ -0.24
RFFL-212ENST00000584655 BCAR3O75815 825 aa13.53□□□□□ -0.24
RFFL-212ENST00000584655 TSR2Q969E8 191 aaKnown RBP13.53□□□□□ -0.24
RFFL-212ENST00000584655 AMER1Q5JTC6 1135 aaPredicted RBP13.52□□□□□ -0.24
RFFL-212ENST00000584655 NME9Q86XW9 330 aa13.52□□□□□ -0.25
RFFL-212ENST00000584655 EVC2Q86UK5 1308 aa13.52□□□□□ -0.25
RFFL-212ENST00000584655 C14orf93Q9H972 538 aaKnown RBP13.51□□□□□ -0.25
RFFL-212ENST00000584655 RALGAPBQ86X10 1494 aa13.5□□□□□ -0.25
RFFL-212ENST00000584655 CRBNQ96SW2 442 aa13.5□□□□□ -0.25
RFFL-212ENST00000584655 RBM19Q9Y4C8 960 aaKnown RBP13.5□□□□□ -0.25
RFFL-212ENST00000584655 NSD3Q9BZ95 1437 aa13.5□□□□□ -0.25
RFFL-212ENST00000584655 NGDNQ8NEJ9 315 aaKnown RBP13.5□□□□□ -0.25
RFFL-212ENST00000584655 POGZQ7Z3K3 1410 aa13.49□□□□□ -0.25
RFFL-212ENST00000584655 PRDM15P57071 1507 aaPredicted RBP13.49□□□□□ -0.25
RFFL-212ENST00000584655 EIF3AQ14152 1382 aaKnown RBP13.49□□□□□ -0.25
RFFL-212ENST00000584655 EMILIN1Q9Y6C2 1016 aa13.49□□□□□ -0.25
RFFL-212ENST00000584655 PLEKHH1Q9ULM0 1364 aa13.49□□□□□ -0.25
RFFL-212ENST00000584655 NECTIN2Q92692 538 aa13.48□□□□□ -0.25
RFFL-212ENST00000584655 PPP4R2Q9NY27 417 aa13.48□□□□□ -0.25
RFFL-212ENST00000584655 ADGBQ8N7X0 1667 aa13.48□□□□□ -0.25
RFFL-212ENST00000584655 DCTN1Q14203 1278 aa13.48□□□□□ -0.25
RFFL-212ENST00000584655 TNNQ9UQP3 1299 aa13.48□□□□□ -0.25
RFFL-212ENST00000584655 SHROOM2Q13796 1616 aa13.48□□□□□ -0.25
RFFL-212ENST00000584655 A0A0G2JS52 829 aa13.48□□□□□ -0.25
RFFL-212ENST00000584655 ZFYVE16Q7Z3T8 1539 aa13.48□□□□□ -0.25
RFFL-212ENST00000584655 UHRF1BP1LA0JNW5 1464 aa13.47□□□□□ -0.25
RFFL-212ENST00000584655 LTKP29376 864 aa13.47□□□□□ -0.25
RFFL-212ENST00000584655 HSPA2P54652 639 aa13.47□□□□□ -0.25
RFFL-212ENST00000584655 HDGFL2Q7Z4V5 671 aaPredicted RBP13.47□□□□□ -0.25
RFFL-212ENST00000584655 TCP11L2Q8N4U5 519 aa13.47□□□□□ -0.25
RFFL-212ENST00000584655 SLC52A1Q9NWF4 448 aa13.47□□□□□ -0.25
RFFL-212ENST00000584655 CFAP53Q96M91 514 aa13.47□□□□□ -0.25
RFFL-212ENST00000584655 UHRF1BP1Q6BDS2 1440 aa13.47□□□□□ -0.25
RFFL-212ENST00000584655 COL17A1Q9UMD9 1497 aaPredicted RBP13.46□□□□□ -0.25
RFFL-212ENST00000584655 PANK1Q8TE04 598 aa13.46□□□□□ -0.25
RFFL-212ENST00000584655 ARHGEF5Q12774 1597 aa13.46□□□□□ -0.25
RFFL-212ENST00000584655 GOLGA2Q08379 1002 aa13.46□□□□□ -0.26
RFFL-212ENST00000584655 COG6Q9Y2V7 657 aa13.46□□□□□ -0.26
RFFL-212ENST00000584655 EID1Q9Y6B2 187 aa13.45□□□□□ -0.26
RFFL-212ENST00000584655 MAPK8IP3Q9UPT6 1336 aa13.45□□□□□ -0.26
RFFL-212ENST00000584655 CGNL1Q0VF96 1302 aa13.45□□□□□ -0.26
RFFL-212ENST00000584655 NBR1Q14596 966 aa13.44□□□□□ -0.26
RFFL-212ENST00000584655 MAGI2Q86UL8 1455 aa13.44□□□□□ -0.26
RFFL-212ENST00000584655 APBB1O00213 710 aa13.44□□□□□ -0.26
RFFL-212ENST00000584655 NEFMP07197 916 aa13.44□□□□□ -0.26
RFFL-212ENST00000584655 TERF2IPQ9NYB0 399 aa13.43□□□□□ -0.26
RFFL-212ENST00000584655 MAST1Q9Y2H9 1570 aa13.43□□□□□ -0.26
RFFL-212ENST00000584655 MIS18AQ9NYP9 233 aa13.43□□□□□ -0.26
RFFL-212ENST00000584655 RRP1P56182 461 aaKnown RBP13.42□□□□□ -0.26
RFFL-212ENST00000584655 ZMYM3Q14202 1370 aa13.42□□□□□ -0.26
RFFL-212ENST00000584655 ANP32EQ9BTT0 268 aa13.42□□□□□ -0.26
RFFL-212ENST00000584655 DDX17Q92841 729 aaKnown RBP13.42□□□□□ -0.26
RFFL-212ENST00000584655 SCAF11Q99590 1463 aaKnown RBP13.41□□□□□ -0.26
RFFL-212ENST00000584655 RTEL1-TNFRSF6BF6WH68 1400 aa13.41□□□□□ -0.26
RFFL-212ENST00000584655 CROCC2H7BZ55 1655 aa13.41□□□□□ -0.26
RFFL-212ENST00000584655 NUDT16Q96DE0 195 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms