RNA–Protein interactions for RNA: ENST00000584651.5

EPB41L3-233, Transcript of erythrocyte membrane protein band 4.1 like 3, human

TSL 5

Gene EPB41L3, Length 546 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EPB41L3-233	ENST00000584651	EID1	Q9Y6B2	187 aa		42.61	■■■■■ 4.41
EPB41L3-233	ENST00000584651	NCKAP5L	Q9HCH0	1330 aa		42.61	■■■■■ 4.41
EPB41L3-233	ENST00000584651	SCAF11	Q99590	1463 aa	Known RBP	42.61	■■■■■ 4.41
EPB41L3-233	ENST00000584651	POLR1A	O95602	1720 aa	Predicted RBP	42.6	■■■■■ 4.41
EPB41L3-233	ENST00000584651	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	42.59	■■■■■ 4.41
EPB41L3-233	ENST00000584651	NEXMIF	Q5QGS0	1516 aa		42.58	■■■■■ 4.41
EPB41L3-233	ENST00000584651	SIN3A	Q96ST3	1273 aa		42.58	■■■■■ 4.41
EPB41L3-233	ENST00000584651	MED14	O60244	1454 aa		42.57	■■■■■ 4.41
EPB41L3-233	ENST00000584651	CLSPN	Q9HAW4	1339 aa		42.57	■■■■■ 4.41
EPB41L3-233	ENST00000584651	RGL3	Q3MIN7	710 aa		42.56	■■■■■ 4.4
EPB41L3-233	ENST00000584651	PPL	O60437	1756 aa		42.5	■■■■■ 4.39
EPB41L3-233	ENST00000584651	DMRT2	Q9Y5R5	561 aa		42.48	■■■■■ 4.39
EPB41L3-233	ENST00000584651	IFT172	Q9UG01	1749 aa		42.48	■■■■■ 4.39
EPB41L3-233	ENST00000584651	NPHP4	O75161	1426 aa	Predicted RBP	42.47	■■■■■ 4.39
EPB41L3-233	ENST00000584651	CCER1	Q8TC90	406 aa	Predicted RBP	42.47	■■■■■ 4.39
EPB41L3-233	ENST00000584651	NUTM2D	Q5VT03	806 aa	Predicted RBP	42.46	■■■■■ 4.39
EPB41L3-233	ENST00000584651	PLEKHG1	Q9ULL1	1385 aa		42.45	■■■■■ 4.39
EPB41L3-233	ENST00000584651	VGF	O15240	615 aa	Predicted RBP	42.45	■■■■■ 4.39
EPB41L3-233	ENST00000584651	NEUROD1	Q13562	356 aa		42.45	■■■■■ 4.39
EPB41L3-233	ENST00000584651	PPP1R15A	O75807	674 aa	Predicted RBP	42.44	■■■■■ 4.38
EPB41L3-233	ENST00000584651	IQGAP1	P46940	1657 aa		42.41	■■■■■ 4.38
EPB41L3-233	ENST00000584651	STAC3	Q96MF2	364 aa		42.38	■■■■■ 4.37
EPB41L3-233	ENST00000584651	MYOM2	P54296	1465 aa		42.36	■■■■■ 4.37
EPB41L3-233	ENST00000584651	ADGRF5	Q8IZF2	1346 aa		42.33	■■■■■ 4.37
EPB41L3-233	ENST00000584651	DCAF11	Q8TEB1	546 aa		42.33	■■■■■ 4.37
EPB41L3-233	ENST00000584651	SETBP1	Q9Y6X0	1596 aa		42.32	■■■■■ 4.37
EPB41L3-233	ENST00000584651	NRXN1	Q9ULB1	1477 aa		42.31	■■■■■ 4.36
EPB41L3-233	ENST00000584651	L3MBTL2	Q969R5	705 aa		42.31	■■■■■ 4.36
EPB41L3-233	ENST00000584651	NRXN3	Q9Y4C0	1643 aa		42.29	■■■■■ 4.36
EPB41L3-233	ENST00000584651	ADAMTS13	Q76LX8	1427 aa		42.29	■■■■■ 4.36
EPB41L3-233	ENST00000584651	BCAN	Q96GW7	911 aa		42.25	■■■■■ 4.35
EPB41L3-233	ENST00000584651	TBX22	Q9Y458	520 aa		42.25	■■■■■ 4.35
EPB41L3-233	ENST00000584651	PIK3C2G	O75747	1445 aa		42.24	■■■■■ 4.35
EPB41L3-233	ENST00000584651	KDM2A	Q9Y2K7	1162 aa		42.24	■■■■■ 4.35
EPB41L3-233	ENST00000584651	SLC26A8	Q96RN1	970 aa		42.23	■■■■■ 4.35
EPB41L3-233	ENST00000584651	DIP2A	Q14689	1571 aa		42.22	■■■■■ 4.35
EPB41L3-233	ENST00000584651	TONSL	Q96HA7	1378 aa		42.22	■■■■■ 4.35
EPB41L3-233	ENST00000584651	SENP3	Q9H4L4	574 aa	Predicted RBP	42.2	■■■■■ 4.35
EPB41L3-233	ENST00000584651	TIMELESS	Q9UNS1	1208 aa		42.17	■■■■■ 4.34
EPB41L3-233	ENST00000584651	ALK	Q9UM73	1620 aa		42.16	■■■■■ 4.34
EPB41L3-233	ENST00000584651	SETD1A	O15047	1707 aa	Known RBP	42.13	■■■■■ 4.33
EPB41L3-233	ENST00000584651	C14orf93	Q9H972	538 aa	Known RBP	42.12	■■■■■ 4.33
EPB41L3-233	ENST00000584651	PIK3R4	Q99570	1358 aa		42.12	■■■■■ 4.33
EPB41L3-233	ENST00000584651	PRAG1	Q86YV5	1406 aa		42.11	■■■■■ 4.33
EPB41L3-233	ENST00000584651	MET	P08581	1390 aa		42.06	■■■■■ 4.32
EPB41L3-233	ENST00000584651	LAMC1	P11047	1609 aa		42.06	■■■■■ 4.32
EPB41L3-233	ENST00000584651	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	42.05	■■■■■ 4.32
EPB41L3-233	ENST00000584651	CFAP70	Q5T0N1	1121 aa		42.05	■■■■■ 4.32
EPB41L3-233	ENST00000584651	KCNA6	P17658	529 aa		42.03	■■■■■ 4.32
EPB41L3-233	ENST00000584651	CHD2	O14647	1828 aa	Known RBP	42.02	■■■■■ 4.32
EPB41L3-233	ENST00000584651	NWD1	Q149M9	1564 aa		41.99	■■■■■ 4.31
EPB41L3-233	ENST00000584651	PTPRU	Q92729	1446 aa		41.99	■■■■■ 4.31
EPB41L3-233	ENST00000584651	KIAA1210	Q9ULL0	1709 aa		41.98	■■■■■ 4.31
EPB41L3-233	ENST00000584651	LTBP4	Q8N2S1	1624 aa		41.98	■■■■■ 4.31
EPB41L3-233	ENST00000584651	STRCP1	A6NGW2	1772 aa		41.97	■■■■■ 4.31
EPB41L3-233	ENST00000584651	ASXL1	Q8IXJ9	1541 aa		41.97	■■■■■ 4.31
EPB41L3-233	ENST00000584651	NBPF8	Q3BBV2	869 aa		41.95	■■■■■ 4.31
EPB41L3-233	ENST00000584651	ADGRB1	O14514	1584 aa		41.93	■■■■■ 4.3
EPB41L3-233	ENST00000584651	AMOTL2	Q9Y2J4	779 aa		41.92	■■■■■ 4.3
EPB41L3-233	ENST00000584651	TMEM132E	Q6IEE7	984 aa		41.91	■■■■■ 4.3
EPB41L3-233	ENST00000584651	CPS1	P31327	1500 aa		41.9	■■■■■ 4.3
EPB41L3-233	ENST00000584651	XRN1	Q8IZH2	1706 aa	Known RBP	41.9	■■■■■ 4.3
EPB41L3-233	ENST00000584651	NKTR	P30414	1462 aa	Known RBP	41.88	■■■■■ 4.29
EPB41L3-233	ENST00000584651	LRPPRC	P42704	1394 aa	Known RBP	41.88	■■■■■ 4.29
EPB41L3-233	ENST00000584651	TRPM1	Q7Z4N2	1603 aa		41.87	■■■■■ 4.29
EPB41L3-233	ENST00000584651	YTHDC2	Q9H6S0	1430 aa	Known RBP	41.85	■■■■■ 4.29
EPB41L3-233	ENST00000584651	ABCC11	Q96J66	1382 aa		41.84	■■■■■ 4.29
EPB41L3-233	ENST00000584651	NBPF1	Q3BBV0	1214 aa		41.83	■■■■■ 4.29
EPB41L3-233	ENST00000584651	TECPR2	O15040	1411 aa		41.82	■■■■■ 4.29
EPB41L3-233	ENST00000584651	LRRC7	Q96NW7	1537 aa		41.79	■■■■■ 4.28
EPB41L3-233	ENST00000584651	PTCH1	Q13635	1447 aa		41.78	■■■■■ 4.28
EPB41L3-233	ENST00000584651	KNDC1	Q76NI1	1749 aa		41.78	■■■■■ 4.28
EPB41L3-233	ENST00000584651	RALGAPB	Q86X10	1494 aa		41.77	■■■■■ 4.28
EPB41L3-233	ENST00000584651	GPRASP1	Q5JY77	1395 aa		41.76	■■■■■ 4.27
EPB41L3-233	ENST00000584651	SIRT1	Q96EB6	747 aa		41.75	■■■■■ 4.27
EPB41L3-233	ENST00000584651	STK26	Q9P289	416 aa		41.75	■■■■■ 4.27
EPB41L3-233	ENST00000584651	PROSER2	Q86WR7	435 aa	Predicted RBP	41.74	■■■■■ 4.27
EPB41L3-233	ENST00000584651	ROBO2	Q9HCK4	1378 aa		41.73	■■■■■ 4.27
EPB41L3-233	ENST00000584651	ROCK2	O75116	1388 aa	Known RBP	41.72	■■■■■ 4.27
EPB41L3-233	ENST00000584651	DLC1	Q96QB1	1528 aa		41.71	■■■■■ 4.27
EPB41L3-233	ENST00000584651	NCOA3	Q9Y6Q9	1424 aa		41.69	■■■■■ 4.27
EPB41L3-233	ENST00000584651	TMEM94	Q12767	1356 aa		41.69	■■■■■ 4.26
EPB41L3-233	ENST00000584651	FAM135B	Q49AJ0	1406 aa		41.68	■■■■■ 4.26
EPB41L3-233	ENST00000584651	XIRP1	Q702N8	1843 aa	Known RBP	41.67	■■■■■ 4.26
EPB41L3-233	ENST00000584651	CERK	Q8TCT0	537 aa		41.66	■■■■■ 4.26
EPB41L3-233	ENST00000584651	TRAK1	Q9UPV9	953 aa		41.65	■■■■■ 4.26
EPB41L3-233	ENST00000584651	IQSEC2	Q5JU85	1478 aa		41.65	■■■■■ 4.26
EPB41L3-233	ENST00000584651	RBM33	Q96EV2	1170 aa	Known RBP	41.61	■■■■■ 4.25
EPB41L3-233	ENST00000584651	WAPL	Q7Z5K2	1190 aa		41.59	■■■■■ 4.25
EPB41L3-233	ENST00000584651	CARD11	Q9BXL7	1154 aa		41.59	■■■■■ 4.25
EPB41L3-233	ENST00000584651	ARHGEF28	Q8N1W1	1705 aa	Known RBP	41.58	■■■■■ 4.25
EPB41L3-233	ENST00000584651	PLEKHH1	Q9ULM0	1364 aa		41.57	■■■■■ 4.25
EPB41L3-233	ENST00000584651	PRAM1	Q96QH2	718 aa		41.56	■■■■■ 4.24
EPB41L3-233	ENST00000584651	ADGRL3	Q9HAR2	1447 aa		41.51	■■■■■ 4.24
EPB41L3-233	ENST00000584651	POGK	Q9P215	609 aa		41.5	■■■■■ 4.23
EPB41L3-233	ENST00000584651	C19orf44	Q9H6X5	657 aa		41.49	■■■■■ 4.23
EPB41L3-233	ENST00000584651	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	41.48	■■■■■ 4.23
EPB41L3-233	ENST00000584651	MSH6	P52701	1360 aa		41.47	■■■■■ 4.23
EPB41L3-233	ENST00000584651	NALCN	Q8IZF0	1738 aa		41.47	■■■■■ 4.23
EPB41L3-233	ENST00000584651	C14orf37	Q86TY3	774 aa		41.46	■■■■■ 4.23

Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms