RNA–Protein interactions for RNA: ENST00000584042.1

CDK5RAP3-230, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-230ENST00000584042 KDM4FA0A1W2PPD8 638 aa23.98■■□□□ 1.43
CDK5RAP3-230ENST00000584042 ZFYVE9O95405 1425 aa23.98■■□□□ 1.43
CDK5RAP3-230ENST00000584042 KIAA1210Q9ULL0 1709 aa23.98■■□□□ 1.43
CDK5RAP3-230ENST00000584042 SLIT1O75093 1534 aa23.97■■□□□ 1.43
CDK5RAP3-230ENST00000584042 PLPPR3Q6T4P5 718 aa23.97■■□□□ 1.43
CDK5RAP3-230ENST00000584042 RALGAPBQ86X10 1494 aa23.97■■□□□ 1.43
CDK5RAP3-230ENST00000584042 DCAF11Q8TEB1 546 aa23.97■■□□□ 1.43
CDK5RAP3-230ENST00000584042 ZNF326Q5BKZ1 582 aaKnown RBP23.96■■□□□ 1.43
CDK5RAP3-230ENST00000584042 STAG3Q9UJ98 1225 aa23.96■■□□□ 1.43
CDK5RAP3-230ENST00000584042 ARHGAP23Q9P227 1491 aa23.95■■□□□ 1.42
CDK5RAP3-230ENST00000584042 LAMC1P11047 1609 aa23.95■■□□□ 1.42
CDK5RAP3-230ENST00000584042 RIMS2Q9UQ26 1411 aa23.93■■□□□ 1.42
CDK5RAP3-230ENST00000584042 PIK3C2GO75747 1445 aa23.93■■□□□ 1.42
CDK5RAP3-230ENST00000584042 TMEM2Q9UHN6 1383 aa23.92■■□□□ 1.42
CDK5RAP3-230ENST00000584042 NBPF8Q3BBV2 869 aa23.89■■□□□ 1.41
CDK5RAP3-230ENST00000584042 KDM2AQ9Y2K7 1162 aa23.89■■□□□ 1.41
CDK5RAP3-230ENST00000584042 SETBP1Q9Y6X0 1596 aa23.86■■□□□ 1.41
CDK5RAP3-230ENST00000584042 VGFO15240 615 aaPredicted RBP23.86■■□□□ 1.41
CDK5RAP3-230ENST00000584042 ADGRF5Q8IZF2 1346 aa23.85■■□□□ 1.41
CDK5RAP3-230ENST00000584042 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.85■■□□□ 1.41
CDK5RAP3-230ENST00000584042 GPRASP1Q5JY77 1395 aa23.84■■□□□ 1.41
CDK5RAP3-230ENST00000584042 THEMISQ8N1K5 641 aaPredicted RBP23.84■■□□□ 1.41
CDK5RAP3-230ENST00000584042 NRXN3Q9Y4C0 1643 aa23.84■■□□□ 1.41
CDK5RAP3-230ENST00000584042 IQGAP1P46940 1657 aa23.83■■□□□ 1.41
CDK5RAP3-230ENST00000584042 SETD1AO15047 1707 aaKnown RBP23.83■■□□□ 1.41
CDK5RAP3-230ENST00000584042 SCAF11Q99590 1463 aaKnown RBP23.82■■□□□ 1.4
CDK5RAP3-230ENST00000584042 POLR1AO95602 1720 aaPredicted RBP23.82■■□□□ 1.4
CDK5RAP3-230ENST00000584042 HDGFP51858 240 aaKnown RBP23.81■■□□□ 1.4
CDK5RAP3-230ENST00000584042 ROCK2O75116 1388 aaKnown RBP23.79■■□□□ 1.4
CDK5RAP3-230ENST00000584042 PLEKHG1Q9ULL1 1385 aa23.78■■□□□ 1.4
CDK5RAP3-230ENST00000584042 ADGRB1O14514 1584 aa23.78■■□□□ 1.4
CDK5RAP3-230ENST00000584042 DIP2AQ14689 1571 aa23.78■■□□□ 1.4
CDK5RAP3-230ENST00000584042 LMTK3Q96Q04 1460 aa23.78■■□□□ 1.4
CDK5RAP3-230ENST00000584042 ALKQ9UM73 1620 aa23.77■■□□□ 1.4
CDK5RAP3-230ENST00000584042 ASXL1Q8IXJ9 1541 aa23.77■■□□□ 1.4
CDK5RAP3-230ENST00000584042 NUTM2DQ5VT03 806 aaPredicted RBP23.75■■□□□ 1.39
CDK5RAP3-230ENST00000584042 EID1Q9Y6B2 187 aa23.75■■□□□ 1.39
CDK5RAP3-230ENST00000584042 C14orf93Q9H972 538 aaKnown RBP23.73■■□□□ 1.39
CDK5RAP3-230ENST00000584042 LTKP29376 864 aa23.72■■□□□ 1.39
CDK5RAP3-230ENST00000584042 ADAMTS13Q76LX8 1427 aa23.71■■□□□ 1.39
CDK5RAP3-230ENST00000584042 TXNDC2Q86VQ3 553 aa23.71■■□□□ 1.39
CDK5RAP3-230ENST00000584042 MED14O60244 1454 aa23.7■■□□□ 1.38
CDK5RAP3-230ENST00000584042 USP47Q96K76 1375 aa23.7■■□□□ 1.38
CDK5RAP3-230ENST00000584042 CFAP70Q5T0N1 1121 aa23.7■■□□□ 1.38
CDK5RAP3-230ENST00000584042 CARD11Q9BXL7 1154 aa23.69■■□□□ 1.38
CDK5RAP3-230ENST00000584042 KNDC1Q76NI1 1749 aa23.69■■□□□ 1.38
CDK5RAP3-230ENST00000584042 NBPF1Q3BBV0 1214 aa23.68■■□□□ 1.38
CDK5RAP3-230ENST00000584042 ANKLE2Q86XL3 938 aa23.67■■□□□ 1.38
CDK5RAP3-230ENST00000584042 ARHGEF28Q8N1W1 1705 aaKnown RBP23.66■■□□□ 1.38
CDK5RAP3-230ENST00000584042 EIF3AQ14152 1382 aaKnown RBP23.65■■□□□ 1.38
CDK5RAP3-230ENST00000584042 EIF4G2P78344 907 aaKnown RBP eCLIP23.64■■□□□ 1.37
CDK5RAP3-230ENST00000584042 NPHP4O75161 1426 aaPredicted RBP23.64■■□□□ 1.37
CDK5RAP3-230ENST00000584042 DLC1Q96QB1 1528 aa23.63■■□□□ 1.37
CDK5RAP3-230ENST00000584042 YTHDC2Q9H6S0 1430 aaKnown RBP23.61■■□□□ 1.37
CDK5RAP3-230ENST00000584042 CPS1P31327 1500 aa23.6■■□□□ 1.37
CDK5RAP3-230ENST00000584042 TECPR2O15040 1411 aa23.59■■□□□ 1.37
CDK5RAP3-230ENST00000584042 XRN1Q8IZH2 1706 aaKnown RBP23.59■■□□□ 1.37
CDK5RAP3-230ENST00000584042 HSPA5P11021 654 aaKnown RBP23.59■■□□□ 1.37
CDK5RAP3-230ENST00000584042 LRPPRCP42704 1394 aaKnown RBP23.59■■□□□ 1.37
CDK5RAP3-230ENST00000584042 PIK3R4Q99570 1358 aa23.59■■□□□ 1.37
CDK5RAP3-230ENST00000584042 STRCQ7RTU9 1775 aa23.58■■□□□ 1.37
CDK5RAP3-230ENST00000584042 METP08581 1390 aa23.57■■□□□ 1.36
CDK5RAP3-230ENST00000584042 QRICH2Q9H0J4 1663 aa23.57■■□□□ 1.36
CDK5RAP3-230ENST00000584042 BCANQ96GW7 911 aa23.56■■□□□ 1.36
CDK5RAP3-230ENST00000584042 TBX22Q9Y458 520 aa23.56■■□□□ 1.36
CDK5RAP3-230ENST00000584042 NWD1Q149M9 1564 aa23.55■■□□□ 1.36
CDK5RAP3-230ENST00000584042 TMEM132EQ6IEE7 984 aa23.54■■□□□ 1.36
CDK5RAP3-230ENST00000584042 ABCC11Q96J66 1382 aa23.53■■□□□ 1.36
CDK5RAP3-230ENST00000584042 SBNO2Q9Y2G9 1366 aa23.53■■□□□ 1.36
CDK5RAP3-230ENST00000584042 HSPA2P54652 639 aa23.53■■□□□ 1.36
CDK5RAP3-230ENST00000584042 SENP3Q9H4L4 574 aaPredicted RBP23.53■■□□□ 1.36
CDK5RAP3-230ENST00000584042 CHD2O14647 1828 aaKnown RBP23.53■■□□□ 1.36
CDK5RAP3-230ENST00000584042 PTCH1Q13635 1447 aa23.52■■□□□ 1.36
CDK5RAP3-230ENST00000584042 ZNF316A6NFI3 1004 aaPredicted RBP23.52■■□□□ 1.36
CDK5RAP3-230ENST00000584042 NCKAP5LQ9HCH0 1330 aa23.52■■□□□ 1.36
CDK5RAP3-230ENST00000584042 PTPRUQ92729 1446 aa23.5■■□□□ 1.35
CDK5RAP3-230ENST00000584042 FAM135BQ49AJ0 1406 aa23.5■■□□□ 1.35
CDK5RAP3-230ENST00000584042 SLC26A8Q96RN1 970 aa23.49■■□□□ 1.35
CDK5RAP3-230ENST00000584042 ST20-MTHFSA0A0A6YYL1 179 aa23.48■■□□□ 1.35
CDK5RAP3-230ENST00000584042 TRAK1Q9UPV9 953 aa23.47■■□□□ 1.35
CDK5RAP3-230ENST00000584042 CENPJQ9HC77 1338 aaPredicted RBP23.47■■□□□ 1.35
CDK5RAP3-230ENST00000584042 TESK2Q96S53 571 aa23.45■■□□□ 1.34
CDK5RAP3-230ENST00000584042 HIRIP3Q9BW71 556 aaPredicted RBP23.45■■□□□ 1.34
CDK5RAP3-230ENST00000584042 SIRT1Q96EB6 747 aa23.44■■□□□ 1.34
CDK5RAP3-230ENST00000584042 ADGRB2O60241 1585 aa23.44■■□□□ 1.34
CDK5RAP3-230ENST00000584042 NKTRP30414 1462 aaKnown RBP23.43■■□□□ 1.34
CDK5RAP3-230ENST00000584042 STK26Q9P289 416 aa23.43■■□□□ 1.34
CDK5RAP3-230ENST00000584042 ROBO2Q9HCK4 1378 aa23.41■■□□□ 1.34
CDK5RAP3-230ENST00000584042 SLC24A1O60721 1099 aa23.41■■□□□ 1.34
CDK5RAP3-230ENST00000584042 TULP4Q9NRJ4 1543 aa23.39■■□□□ 1.34
CDK5RAP3-230ENST00000584042 CCDC7Q96M83 1385 aa23.39■■□□□ 1.33
CDK5RAP3-230ENST00000584042 PRAM1Q96QH2 718 aa23.38■■□□□ 1.33
CDK5RAP3-230ENST00000584042 AMOTL2Q9Y2J4 779 aa23.38■■□□□ 1.33
CDK5RAP3-230ENST00000584042 DISP3Q9P2K9 1392 aa23.38■■□□□ 1.33
CDK5RAP3-230ENST00000584042 PLEKHH1Q9ULM0 1364 aa23.38■■□□□ 1.33
CDK5RAP3-230ENST00000584042 TMF1P82094 1093 aa23.36■■□□□ 1.33
CDK5RAP3-230ENST00000584042 POGKQ9P215 609 aa23.36■■□□□ 1.33
CDK5RAP3-230ENST00000584042 STRCP1A6NGW2 1772 aa23.36■■□□□ 1.33
CDK5RAP3-230ENST00000584042 KIF7Q2M1P5 1343 aa23.35■■□□□ 1.33
CDK5RAP3-230ENST00000584042 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms