RNA–Protein interactions for RNA: ENST00000583775.1

PRKCA-205, Transcript of protein kinase C alpha, humanhuman

TSL 3

Gene PRKCA, Length 321 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-205ENST00000583775 GRXCR2A6NFK2 248 aa10.37□□□□□ -0.75
PRKCA-205ENST00000583775 TMUB1Q9BVT8 246 aa10.37□□□□□ -0.75
PRKCA-205ENST00000583775 CECR2Q9BXF3 1484 aa10.36□□□□□ -0.75
PRKCA-205ENST00000583775 TRIM67Q6ZTA4 783 aa10.36□□□□□ -0.75
PRKCA-205ENST00000583775 EMID1Q96A84 441 aaPredicted RBP10.36□□□□□ -0.75
PRKCA-205ENST00000583775 MROH2BQ7Z745 1585 aa10.35□□□□□ -0.75
PRKCA-205ENST00000583775 BICRAQ9NZM4 1560 aa10.35□□□□□ -0.75
PRKCA-205ENST00000583775 ZNF787Q6DD87 383 aa10.35□□□□□ -0.75
PRKCA-205ENST00000583775 SWT1Q5T5J6 900 aaKnown RBP10.34□□□□□ -0.75
PRKCA-205ENST00000583775 HDGFP51858 240 aaKnown RBP10.33□□□□□ -0.76
PRKCA-205ENST00000583775 EYA1Q99502 592 aa10.33□□□□□ -0.76
PRKCA-205ENST00000583775 ZPR1O75312 459 aa10.32□□□□□ -0.76
PRKCA-205ENST00000583775 KCNV2Q8TDN2 545 aa10.32□□□□□ -0.76
PRKCA-205ENST00000583775 NECTIN2Q92692 538 aa10.32□□□□□ -0.76
PRKCA-205ENST00000583775 COPS2P61201 443 aa10.31□□□□□ -0.76
PRKCA-205ENST00000583775 SLF2Q8IX21 1173 aa10.31□□□□□ -0.76
PRKCA-205ENST00000583775 ZNF775Q96BV0 537 aaPredicted RBP10.31□□□□□ -0.76
PRKCA-205ENST00000583775 BCANQ96GW7 911 aa10.31□□□□□ -0.76
PRKCA-205ENST00000583775 SMARCA4P51532 1647 aa10.3□□□□□ -0.76
PRKCA-205ENST00000583775 RNF40O75150 1001 aa10.3□□□□□ -0.76
PRKCA-205ENST00000583775 PADI6Q6TGC4 694 aa10.3□□□□□ -0.76
PRKCA-205ENST00000583775 GGCXP38435 758 aa10.29□□□□□ -0.76
PRKCA-205ENST00000583775 WIZO95785 1651 aa10.28□□□□□ -0.76
PRKCA-205ENST00000583775 RNF223E7ERA6 249 aa10.27□□□□□ -0.77
PRKCA-205ENST00000583775 PEG3Q9GZU2 1588 aa10.24□□□□□ -0.77
PRKCA-205ENST00000583775 SLC19A1P41440 591 aa10.24□□□□□ -0.77
PRKCA-205ENST00000583775 PRR20EP86478 221 aa10.23□□□□□ -0.77
PRKCA-205ENST00000583775 PRR20CP86479 221 aa10.23□□□□□ -0.77
PRKCA-205ENST00000583775 PRR20DP86480 221 aa10.23□□□□□ -0.77
PRKCA-205ENST00000583775 PRR20BP86481 221 aa10.23□□□□□ -0.77
PRKCA-205ENST00000583775 PRR20AP86496 221 aa10.23□□□□□ -0.77
PRKCA-205ENST00000583775 MYT1Q01538 1121 aa10.23□□□□□ -0.77
PRKCA-205ENST00000583775 SPRYD7Q5W111 196 aa10.23□□□□□ -0.77
PRKCA-205ENST00000583775 BLOC1S3Q6QNY0 202 aa10.22□□□□□ -0.77
PRKCA-205ENST00000583775 PCDHB3Q9Y5E6 796 aa10.22□□□□□ -0.77
PRKCA-205ENST00000583775 TOP2AP11388 1531 aaKnown RBP10.22□□□□□ -0.77
PRKCA-205ENST00000583775 P3H3Q8IVL6 736 aa10.21□□□□□ -0.77
PRKCA-205ENST00000583775 PRR14Q9BWN1 585 aa10.21□□□□□ -0.77
PRKCA-205ENST00000583775 POTECB2RU33 542 aa10.2□□□□□ -0.78
PRKCA-205ENST00000583775 DGAT1O75907 488 aa10.2□□□□□ -0.78
PRKCA-205ENST00000583775 ZNF598Q86UK7 904 aaKnown RBP10.2□□□□□ -0.78
PRKCA-205ENST00000583775 ANKLE1Q8NAG6 615 aa10.2□□□□□ -0.78
PRKCA-205ENST00000583775 LIAT1Q6ZQX7 453 aa10.19□□□□□ -0.78
PRKCA-205ENST00000583775 SEMA3EO15041 775 aa10.17□□□□□ -0.78
PRKCA-205ENST00000583775 TLL1O43897 1013 aa10.17□□□□□ -0.78
PRKCA-205ENST00000583775 GDF9O60383 454 aa10.17□□□□□ -0.78
PRKCA-205ENST00000583775 PRKCSHP14314 528 aaPredicted RBP10.17□□□□□ -0.78
PRKCA-205ENST00000583775 LCE2AQ5TA79 106 aaPredicted RBP10.17□□□□□ -0.78
PRKCA-205ENST00000583775 TMEM134Q9H6X4 195 aa10.17□□□□□ -0.78
PRKCA-205ENST00000583775 ACTN4O43707 911 aaKnown RBP10.16□□□□□ -0.78
PRKCA-205ENST00000583775 ARHGEF1Q92888 912 aaKnown RBP10.16□□□□□ -0.78
PRKCA-205ENST00000583775 EIF4G1Q04637 1599 aaKnown RBP10.15□□□□□ -0.78
PRKCA-205ENST00000583775 DNAJB2P25686 324 aa10.15□□□□□ -0.78
PRKCA-205ENST00000583775 SLC4A3P48751 1232 aa10.15□□□□□ -0.78
PRKCA-205ENST00000583775 PTGDRQ13258 359 aa10.15□□□□□ -0.78
PRKCA-205ENST00000583775 PPEF1O14829 653 aaPredicted RBP10.14□□□□□ -0.79
PRKCA-205ENST00000583775 PKDCCQ504Y2 493 aa10.14□□□□□ -0.79
PRKCA-205ENST00000583775 ADGRG1Q9Y653 693 aa10.14□□□□□ -0.79
PRKCA-205ENST00000583775 S1PR4O95977 384 aa10.13□□□□□ -0.79
PRKCA-205ENST00000583775 MLLT3P42568 568 aaPredicted RBP10.12□□□□□ -0.79
PRKCA-205ENST00000583775 SMARCA2P51531 1590 aa10.12□□□□□ -0.79
PRKCA-205ENST00000583775 PLA2G2CQ5R387 149 aa10.11□□□□□ -0.79
PRKCA-205ENST00000583775 ZNF697Q5TEC3 545 aa10.11□□□□□ -0.79
PRKCA-205ENST00000583775 SLC10A3P09131 477 aa10.1□□□□□ -0.79
PRKCA-205ENST00000583775 RCCD1A6NED2 376 aa10.09□□□□□ -0.79
PRKCA-205ENST00000583775 TPRNQ4KMQ1 711 aa10.09□□□□□ -0.79
PRKCA-205ENST00000583775 RBM46Q8TBY0 533 aaKnown RBP10.09□□□□□ -0.79
PRKCA-205ENST00000583775 ADH1BP00325 375 aa10.08□□□□□ -0.8
PRKCA-205ENST00000583775 CCDC88BA6NC98 1476 aa10.08□□□□□ -0.8
PRKCA-205ENST00000583775 ATAD2BQ9ULI0 1458 aa10.07□□□□□ -0.8
PRKCA-205ENST00000583775 KMT5BQ4FZB7 885 aa10.07□□□□□ -0.8
PRKCA-205ENST00000583775 AAASQ9NRG9 546 aa10.07□□□□□ -0.8
PRKCA-205ENST00000583775 TNFRSF10AO00220 468 aa10.06□□□□□ -0.8
PRKCA-205ENST00000583775 CFHP08603 1231 aa10.06□□□□□ -0.8
PRKCA-205ENST00000583775 PKD2L1Q9P0L9 805 aa10.06□□□□□ -0.8
PRKCA-205ENST00000583775 FAM187AA6NFU0 413 aa10.05□□□□□ -0.8
PRKCA-205ENST00000583775 TREML4Q6UXN2 200 aa10.05□□□□□ -0.8
PRKCA-205ENST00000583775 FAM161AQ3B820 660 aa10.04□□□□□ -0.8
PRKCA-205ENST00000583775 CRIPAKQ8N1N5 446 aa10.04□□□□□ -0.8
PRKCA-205ENST00000583775 TESPA1A2RU30 521 aaPredicted RBP10.03□□□□□ -0.8
PRKCA-205ENST00000583775 ST8SIA5O15466 376 aa10.03□□□□□ -0.8
PRKCA-205ENST00000583775 NR1I2O75469 434 aa10.03□□□□□ -0.8
PRKCA-205ENST00000583775 SCUBE3Q8IX30 993 aa10.03□□□□□ -0.8
PRKCA-205ENST00000583775 SLC6A16Q9GZN6 736 aa10.03□□□□□ -0.8
PRKCA-205ENST00000583775 LMOD2Q6P5Q4 547 aa10.02□□□□□ -0.81
PRKCA-205ENST00000583775 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.01□□□□□ -0.81
PRKCA-205ENST00000583775 HMGXB3Q12766 1538 aa10.01□□□□□ -0.81
PRKCA-205ENST00000583775 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10□□□□□ -0.81
PRKCA-205ENST00000583775 NCAPD3P42695 1498 aa9.99□□□□□ -0.81
PRKCA-205ENST00000583775 BAZ1BQ9UIG0 1483 aaKnown RBP9.99□□□□□ -0.81
PRKCA-205ENST00000583775 AVPP01185 164 aa9.99□□□□□ -0.81
PRKCA-205ENST00000583775 RBM26Q5T8P6 1007 aaKnown RBP9.99□□□□□ -0.81
PRKCA-205ENST00000583775 PXYLP1Q8TE99 480 aa9.99□□□□□ -0.81
PRKCA-205ENST00000583775 TOR4AQ9NXH8 423 aa9.98□□□□□ -0.81
PRKCA-205ENST00000583775 DACH1Q9UI36 760 aa9.98□□□□□ -0.81
PRKCA-205ENST00000583775 RPIAP49247 311 aa9.96□□□□□ -0.82
PRKCA-205ENST00000583775 SPSB2Q99619 263 aa9.96□□□□□ -0.82
PRKCA-205ENST00000583775 PUS10Q3MIT2 529 aaKnown RBP9.95□□□□□ -0.82
PRKCA-205ENST00000583775 THAP11Q96EK4 314 aa9.95□□□□□ -0.82
PRKCA-205ENST00000583775 TULP1O00294 542 aaPredicted RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms