RNA–Protein interactions for RNA: ENST00000583382.1

CDH8-209, Transcript of cadherin 8, humanhuman

TSL 5

Gene CDH8, Length 1,528 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-209ENST00000583382 RIMS1Q86UR5 1692 aaKnown RBP8.15□□□□□ -1.11
CDH8-209ENST00000583382 MLLT3P42568 568 aaPredicted RBP8.14□□□□□ -1.11
CDH8-209ENST00000583382 TESPA1A2RU30 521 aaPredicted RBP8.13□□□□□ -1.11
CDH8-209ENST00000583382 ZNF316A6NFI3 1004 aaPredicted RBP8.13□□□□□ -1.11
CDH8-209ENST00000583382 PTGER2P43116 358 aa8.13□□□□□ -1.11
CDH8-209ENST00000583382 DDX12PQ92771 950 aa8.13□□□□□ -1.11
CDH8-209ENST00000583382 MARVELD3Q96A59 401 aa8.13□□□□□ -1.11
CDH8-209ENST00000583382 LHX6Q9UPM6 363 aa8.13□□□□□ -1.11
CDH8-209ENST00000583382 KIF27Q86VH2 1401 aa8.12□□□□□ -1.11
CDH8-209ENST00000583382 IGF1RP08069 1367 aa8.12□□□□□ -1.11
CDH8-209ENST00000583382 DISP1Q96F81 1524 aa8.11□□□□□ -1.11
CDH8-209ENST00000583382 GRXCR2A6NFK2 248 aa8.1□□□□□ -1.11
CDH8-209ENST00000583382 EMP3P54852 163 aa8.1□□□□□ -1.11
CDH8-209ENST00000583382 POGZQ7Z3K3 1410 aa8.09□□□□□ -1.11
CDH8-209ENST00000583382 RAPGEF3O95398 923 aa8.09□□□□□ -1.11
CDH8-209ENST00000583382 KIAA0556O60303 1618 aa8.09□□□□□ -1.11
CDH8-209ENST00000583382 UGGT2Q9NYU1 1516 aa8.09□□□□□ -1.11
CDH8-209ENST00000583382 CARMIL1Q5VZK9 1371 aa8.09□□□□□ -1.12
CDH8-209ENST00000583382 FOSBP53539 338 aa8.08□□□□□ -1.12
CDH8-209ENST00000583382 PCDHGA10Q9Y5H3 936 aa8.08□□□□□ -1.12
CDH8-209ENST00000583382 PREX1Q8TCU6 1659 aa8.08□□□□□ -1.12
CDH8-209ENST00000583382 ZNF454Q8N9F8 522 aa8.08□□□□□ -1.12
CDH8-209ENST00000583382 IQSEC2Q5JU85 1478 aa8.07□□□□□ -1.12
CDH8-209ENST00000583382 ERBB3P21860 1342 aa8.07□□□□□ -1.12
CDH8-209ENST00000583382 PHF14O94880 888 aa8.07□□□□□ -1.12
CDH8-209ENST00000583382 OSBPP22059 807 aa8.07□□□□□ -1.12
CDH8-209ENST00000583382 FANCAO15360 1455 aa8.07□□□□□ -1.12
CDH8-209ENST00000583382 NEO1Q92859 1461 aa8.07□□□□□ -1.12
CDH8-209ENST00000583382 YEATS2Q9ULM3 1422 aa8.06□□□□□ -1.12
CDH8-209ENST00000583382 FAM205CA6NFA0 338 aa8.06□□□□□ -1.12
CDH8-209ENST00000583382 PRIM1P49642 420 aaKnown RBP8.06□□□□□ -1.12
CDH8-209ENST00000583382 FAM9AQ8IZU1 332 aaPredicted RBP8.06□□□□□ -1.12
CDH8-209ENST00000583382 ARHGEF40Q8TER5 1519 aa8.06□□□□□ -1.12
CDH8-209ENST00000583382 FER1L4A9Z1Z3 1794 aa8.06□□□□□ -1.12
CDH8-209ENST00000583382 SETD1BQ9UPS6 1966 aaKnown RBP8.05□□□□□ -1.12
CDH8-209ENST00000583382 POTEB3A0JP26 581 aa8.05□□□□□ -1.12
CDH8-209ENST00000583382 VARS2Q5ST30 1063 aaKnown RBP8.05□□□□□ -1.12
CDH8-209ENST00000583382 SMYD5Q6GMV2 418 aa8.05□□□□□ -1.12
CDH8-209ENST00000583382 POTEBQ6S5H4 581 aa8.05□□□□□ -1.12
CDH8-209ENST00000583382 EPAS1Q99814 870 aa8.05□□□□□ -1.12
CDH8-209ENST00000583382 ABCA9Q8IUA7 1624 aa8.05□□□□□ -1.12
CDH8-209ENST00000583382 TYW1BQ6NUM6 668 aa8.04□□□□□ -1.12
CDH8-209ENST00000583382 TTC37Q6PGP7 1564 aa8.04□□□□□ -1.12
CDH8-209ENST00000583382 STRCQ7RTU9 1775 aa8.04□□□□□ -1.12
CDH8-209ENST00000583382 PSDA5PKW4 1024 aaPredicted RBP8.03□□□□□ -1.12
CDH8-209ENST00000583382 PPP4R3BQ5MIZ7 849 aa8.03□□□□□ -1.12
CDH8-209ENST00000583382 RBM26Q5T8P6 1007 aaKnown RBP8.03□□□□□ -1.12
CDH8-209ENST00000583382 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.03□□□□□ -1.12
CDH8-209ENST00000583382 ZDHHC16Q969W1 377 aa8.03□□□□□ -1.12
CDH8-209ENST00000583382 ABCA8O94911 1581 aa8.03□□□□□ -1.12
CDH8-209ENST00000583382 GOLGA3Q08378 1498 aa8.03□□□□□ -1.12
CDH8-209ENST00000583382 FRMPD1Q5SYB0 1578 aa8.03□□□□□ -1.12
CDH8-209ENST00000583382 TULP1O00294 542 aaPredicted RBP8.03□□□□□ -1.12
CDH8-209ENST00000583382 MLECQ14165 292 aa8.03□□□□□ -1.12
CDH8-209ENST00000583382 FBXW7Q969H0 707 aa8.03□□□□□ -1.12
CDH8-209ENST00000583382 RBM33Q96EV2 1170 aaKnown RBP8.03□□□□□ -1.12
CDH8-209ENST00000583382 HS3ST6Q96QI5 342 aa8.03□□□□□ -1.12
CDH8-209ENST00000583382 ADAM33Q9BZ11 813 aa8.03□□□□□ -1.12
CDH8-209ENST00000583382 AKNAQ7Z591 1439 aa8.02□□□□□ -1.13
CDH8-209ENST00000583382 EN1Q05925 392 aaPredicted RBP8.02□□□□□ -1.13
CDH8-209ENST00000583382 PTPRTO14522 1441 aa8.01□□□□□ -1.13
CDH8-209ENST00000583382 LMOD2Q6P5Q4 547 aa8.01□□□□□ -1.13
CDH8-209ENST00000583382 EFCAB5A4FU69 1503 aa8□□□□□ -1.13
CDH8-209ENST00000583382 RICTORQ6R327 1708 aa8□□□□□ -1.13
CDH8-209ENST00000583382 ARID3CA6NKF2 412 aa8□□□□□ -1.13
CDH8-209ENST00000583382 MAP3K7O43318 606 aa8□□□□□ -1.13
CDH8-209ENST00000583382 CFAP74Q9C0B2 1584 aa8□□□□□ -1.13
CDH8-209ENST00000583382 CTTNBP2Q8WZ74 1663 aa8□□□□□ -1.13
CDH8-209ENST00000583382 DENND4BO75064 1496 aaPredicted RBP7.99□□□□□ -1.13
CDH8-209ENST00000583382 CEBPAP49715 358 aaPredicted RBP7.99□□□□□ -1.13
CDH8-209ENST00000583382 TSR1Q2NL82 804 aaKnown RBP7.99□□□□□ -1.13
CDH8-209ENST00000583382 BCL2L12Q9HB09 334 aa7.99□□□□□ -1.13
CDH8-209ENST00000583382 UHRF1BP1Q6BDS2 1440 aa7.99□□□□□ -1.13
CDH8-209ENST00000583382 UBAP1LF5GYI3 381 aa7.98□□□□□ -1.13
CDH8-209ENST00000583382 MAGI2Q86UL8 1455 aa7.98□□□□□ -1.13
CDH8-209ENST00000583382 RAPGEF2Q9Y4G8 1499 aa7.98□□□□□ -1.13
CDH8-209ENST00000583382 LTBP4Q8N2S1 1624 aa7.98□□□□□ -1.13
CDH8-209ENST00000583382 C6orf132Q5T0Z8 1188 aa7.98□□□□□ -1.13
CDH8-209ENST00000583382 POTEGQ6S5H5 508 aa7.98□□□□□ -1.13
CDH8-209ENST00000583382 POTEEQ6S8J3 1075 aa7.98□□□□□ -1.13
CDH8-209ENST00000583382 ZNF687Q8N1G0 1237 aa7.98□□□□□ -1.13
CDH8-209ENST00000583382 CDHR5Q9HBB8 845 aa7.98□□□□□ -1.13
CDH8-209ENST00000583382 ZMYM4Q5VZL5 1548 aa7.98□□□□□ -1.13
CDH8-209ENST00000583382 ZFYVE16Q7Z3T8 1539 aa7.98□□□□□ -1.13
CDH8-209ENST00000583382 NUTM2FA1L443 756 aa7.97□□□□□ -1.13
CDH8-209ENST00000583382 FHOD3Q2V2M9 1422 aa7.97□□□□□ -1.13
CDH8-209ENST00000583382 POTEMA6NI47 508 aa7.96□□□□□ -1.14
CDH8-209ENST00000583382 GPIHBP1Q8IV16 184 aa7.96□□□□□ -1.14
CDH8-209ENST00000583382 AXIN2Q9Y2T1 843 aa7.96□□□□□ -1.14
CDH8-209ENST00000583382 MED1Q15648 1581 aaPredicted RBP7.95□□□□□ -1.14
CDH8-209ENST00000583382 PSEN2P49810 448 aa7.95□□□□□ -1.14
CDH8-209ENST00000583382 KCNK17Q96T54 332 aa7.95□□□□□ -1.14
CDH8-209ENST00000583382 ARHGEF12Q9NZN5 1544 aa7.95□□□□□ -1.14
CDH8-209ENST00000583382 COL9A1P20849 921 aa7.94□□□□□ -1.14
CDH8-209ENST00000583382 PTPREP23469 700 aa7.94□□□□□ -1.14
CDH8-209ENST00000583382 NPDC1Q9NQX5 325 aaPredicted RBP7.94□□□□□ -1.14
CDH8-209ENST00000583382 ATP10BO94823 1461 aa7.94□□□□□ -1.14
CDH8-209ENST00000583382 SIGLEC1Q9BZZ2 1709 aa7.93□□□□□ -1.14
CDH8-209ENST00000583382 GPR37O15354 613 aa7.93□□□□□ -1.14
CDH8-209ENST00000583382 HSPA1LP34931 641 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms