RNA–Protein interactions for RNA: ENST00000583320.5

SNX11-212, Transcript of sorting nexin 11, humanhuman

TSL 3

Gene SNX11, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-212ENST00000583320 KANK1Q14678 1352 aa27.37■■□□□ 1.97
SNX11-212ENST00000583320 DAPK1P53355 1430 aa27.37■■□□□ 1.97
SNX11-212ENST00000583320 SLAIN2Q9P270 581 aa27.36■■□□□ 1.97
SNX11-212ENST00000583320 CHD2O14647 1828 aaKnown RBP27.32■■□□□ 1.96
SNX11-212ENST00000583320 MYO5BQ9ULV0 1848 aa27.32■■□□□ 1.96
SNX11-212ENST00000583320 ZFYVE9O95405 1425 aa27.32■■□□□ 1.96
SNX11-212ENST00000583320 BCANQ96GW7 911 aa27.28■■□□□ 1.96
SNX11-212ENST00000583320 UPF1Q92900 1129 aaKnown RBP eCLIP27.27■■□□□ 1.96
SNX11-212ENST00000583320 CHIC2Q9UKJ5 165 aa27.27■■□□□ 1.96
SNX11-212ENST00000583320 PLEKHG1Q9ULL1 1385 aa27.26■■□□□ 1.95
SNX11-212ENST00000583320 GCC2Q8IWJ2 1684 aa27.26■■□□□ 1.95
SNX11-212ENST00000583320 PPARGC1BQ86YN6 1023 aaKnown RBP27.25■■□□□ 1.95
SNX11-212ENST00000583320 TRIM26Q12899 539 aaPredicted RBP27.24■■□□□ 1.95
SNX11-212ENST00000583320 FGD6Q6ZV73 1430 aa27.24■■□□□ 1.95
SNX11-212ENST00000583320 ANKRD30AQ9BXX3 1397 aa27.23■■□□□ 1.95
SNX11-212ENST00000583320 TRIM52Q96A61 297 aa27.23■■□□□ 1.95
SNX11-212ENST00000583320 RIMS2Q9UQ26 1411 aa27.23■■□□□ 1.95
SNX11-212ENST00000583320 AHDC1Q5TGY3 1603 aaPredicted RBP27.23■■□□□ 1.95
SNX11-212ENST00000583320 SHPRHQ149N8 1683 aa27.22■■□□□ 1.95
SNX11-212ENST00000583320 SLC52A1Q9NWF4 448 aa27.22■■□□□ 1.95
SNX11-212ENST00000583320 SPATA31A6Q5VVP1 1343 aa27.21■■□□□ 1.95
SNX11-212ENST00000583320 TMEM131LA2VDJ0 1609 aa27.21■■□□□ 1.95
SNX11-212ENST00000583320 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.2■■□□□ 1.94
SNX11-212ENST00000583320 MEX3CQ5U5Q3 659 aaKnown RBP27.18■■□□□ 1.94
SNX11-212ENST00000583320 RPRD2Q5VT52 1461 aaKnown RBP27.18■■□□□ 1.94
SNX11-212ENST00000583320 DIP2AQ14689 1571 aa27.17■■□□□ 1.94
SNX11-212ENST00000583320 ADAMTS13Q76LX8 1427 aa27.16■■□□□ 1.94
SNX11-212ENST00000583320 ZNF772Q68DY9 489 aaPredicted RBP27.16■■□□□ 1.94
SNX11-212ENST00000583320 NCOA3Q9Y6Q9 1424 aa27.16■■□□□ 1.94
SNX11-212ENST00000583320 ADGRL2O95490 1459 aa27.15■■□□□ 1.94
SNX11-212ENST00000583320 PPP1R15AO75807 674 aaPredicted RBP27.15■■□□□ 1.94
SNX11-212ENST00000583320 C14orf37Q86TY3 774 aa27.13■■□□□ 1.93
SNX11-212ENST00000583320 TBX22Q9Y458 520 aa27.13■■□□□ 1.93
SNX11-212ENST00000583320 NUTM2DQ5VT03 806 aaPredicted RBP27.11■■□□□ 1.93
SNX11-212ENST00000583320 SRCAPQ6ZRS2 3230 aa27.09■■□□□ 1.93
SNX11-212ENST00000583320 CADPS2Q86UW7 1296 aa27.08■■□□□ 1.93
SNX11-212ENST00000583320 RXRBP28702 533 aa27.07■■□□□ 1.92
SNX11-212ENST00000583320 BRINP3Q76B58 766 aa27.07■■□□□ 1.92
SNX11-212ENST00000583320 C19orf44Q9H6X5 657 aa27.07■■□□□ 1.92
SNX11-212ENST00000583320 PTPRUQ92729 1446 aa27.07■■□□□ 1.92
SNX11-212ENST00000583320 ANKRD50Q9ULJ7 1429 aa27.07■■□□□ 1.92
SNX11-212ENST00000583320 CDK12Q9NYV4 1490 aaPredicted RBP27.06■■□□□ 1.92
SNX11-212ENST00000583320 NUTM2BA6NNL0 878 aaPredicted RBP27.05■■□□□ 1.92
SNX11-212ENST00000583320 NUTM2EB1AL46 878 aaPredicted RBP27.05■■□□□ 1.92
SNX11-212ENST00000583320 ATF3P18847 181 aa27.05■■□□□ 1.92
SNX11-212ENST00000583320 NUTM2AQ8IVF1 878 aaPredicted RBP27.05■■□□□ 1.92
SNX11-212ENST00000583320 E9PCH4 1651 aa27.03■■□□□ 1.92
SNX11-212ENST00000583320 CHGAP10645 457 aaKnown RBP27.03■■□□□ 1.92
SNX11-212ENST00000583320 ASXL1Q8IXJ9 1541 aa27.03■■□□□ 1.92
SNX11-212ENST00000583320 UNC13BO14795 1591 aa27.02■■□□□ 1.92
SNX11-212ENST00000583320 PIK3R4Q99570 1358 aa27.02■■□□□ 1.92
SNX11-212ENST00000583320 AFF2P51816 1311 aa27.02■■□□□ 1.92
SNX11-212ENST00000583320 HDGFP51858 240 aaKnown RBP27.02■■□□□ 1.92
SNX11-212ENST00000583320 TRPM2O94759 1503 aa27.01■■□□□ 1.91
SNX11-212ENST00000583320 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.01■■□□□ 1.91
SNX11-212ENST00000583320 RGS12O14924 1447 aa27■■□□□ 1.91
SNX11-212ENST00000583320 PCGF6Q9BYE7 350 aa27■■□□□ 1.91
SNX11-212ENST00000583320 NHSL1Q5SYE7 1610 aa27■■□□□ 1.91
SNX11-212ENST00000583320 AMOTL2Q9Y2J4 779 aa26.98■■□□□ 1.91
SNX11-212ENST00000583320 XRN1Q8IZH2 1706 aaKnown RBP26.98■■□□□ 1.91
SNX11-212ENST00000583320 SETD5Q9C0A6 1442 aa26.98■■□□□ 1.91
SNX11-212ENST00000583320 RRBP1Q9P2E9 1410 aaKnown RBP26.98■■□□□ 1.91
SNX11-212ENST00000583320 MST1RQ04912 1400 aa26.97■■□□□ 1.91
SNX11-212ENST00000583320 NRXN3Q9Y4C0 1643 aa26.97■■□□□ 1.91
SNX11-212ENST00000583320 DCCP43146 1447 aa26.96■■□□□ 1.91
SNX11-212ENST00000583320 FAM50AQ14320 339 aaKnown RBP26.92■■□□□ 1.9
SNX11-212ENST00000583320 DDX17Q92841 729 aaKnown RBP26.91■■□□□ 1.9
SNX11-212ENST00000583320 IQGAP3Q86VI3 1631 aa26.9■■□□□ 1.9
SNX11-212ENST00000583320 PNPLA6Q8IY17 1366 aa26.89■■□□□ 1.9
SNX11-212ENST00000583320 C8orf37Q96NL8 207 aa26.89■■□□□ 1.9
SNX11-212ENST00000583320 SETBP1Q9Y6X0 1596 aa26.88■■□□□ 1.89
SNX11-212ENST00000583320 NALCNQ8IZF0 1738 aa26.85■■□□□ 1.89
SNX11-212ENST00000583320 QTRT2Q9H974 415 aaKnown RBP26.85■■□□□ 1.89
SNX11-212ENST00000583320 RBM6P78332 1123 aaKnown RBP26.84■■□□□ 1.89
SNX11-212ENST00000583320 METP08581 1390 aa26.84■■□□□ 1.89
SNX11-212ENST00000583320 LRRC59Q96AG4 307 aaKnown RBP26.83■■□□□ 1.89
SNX11-212ENST00000583320 ADGRL3Q9HAR2 1447 aa26.82■■□□□ 1.88
SNX11-212ENST00000583320 ADAMTS2O95450 1211 aa26.77■■□□□ 1.88
SNX11-212ENST00000583320 EP400Q96L91 3159 aa26.77■■□□□ 1.88
SNX11-212ENST00000583320 LAMC1P11047 1609 aa26.76■■□□□ 1.87
SNX11-212ENST00000583320 NUP155O75694 1391 aa26.74■■□□□ 1.87
SNX11-212ENST00000583320 SPHKAPQ2M3C7 1700 aa26.74■■□□□ 1.87
SNX11-212ENST00000583320 NGLY1Q96IV0 654 aa26.73■■□□□ 1.87
SNX11-212ENST00000583320 C1orf167Q5SNV9 1468 aa26.73■■□□□ 1.87
SNX11-212ENST00000583320 ROCK1Q13464 1354 aa26.72■■□□□ 1.87
SNX11-212ENST00000583320 ATAD2Q6PL18 1390 aa26.72■■□□□ 1.87
SNX11-212ENST00000583320 NEXMIFQ5QGS0 1516 aa26.7■■□□□ 1.87
SNX11-212ENST00000583320 ZNF326Q5BKZ1 582 aaKnown RBP26.67■■□□□ 1.86
SNX11-212ENST00000583320 CLTCL1P53675 1640 aa26.66■■□□□ 1.86
SNX11-212ENST00000583320 USP21Q9UK80 565 aa26.66■■□□□ 1.86
SNX11-212ENST00000583320 SOS2Q07890 1332 aaPredicted RBP26.65■■□□□ 1.86
SNX11-212ENST00000583320 ATRNO75882 1429 aa26.65■■□□□ 1.86
SNX11-212ENST00000583320 ORAI2Q96SN7 254 aa26.65■■□□□ 1.86
SNX11-212ENST00000583320 COL22A1Q8NFW1 1626 aaPredicted RBP26.64■■□□□ 1.85
SNX11-212ENST00000583320 TRPC5Q9UL62 973 aaPredicted RBP26.62■■□□□ 1.85
SNX11-212ENST00000583320 PTCH1Q13635 1447 aa26.62■■□□□ 1.85
SNX11-212ENST00000583320 ROBO2Q9HCK4 1378 aa26.61■■□□□ 1.85
SNX11-212ENST00000583320 FNBP4Q8N3X1 1017 aaPredicted RBP26.61■■□□□ 1.85
SNX11-212ENST00000583320 ZRANB1Q9UGI0 708 aa26.59■■□□□ 1.85
SNX11-212ENST00000583320 MYOM2P54296 1465 aa26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms