RNA–Protein interactions for RNA: ENST00000582544.1

CACNB1-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 2

Gene CACNB1, Length 406 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-210ENST00000582544 IQGAP3Q86VI3 1631 aa12.3□□□□□ -0.44
CACNB1-210ENST00000582544 ZFYVE9O95405 1425 aa12.3□□□□□ -0.44
CACNB1-210ENST00000582544 IDI1Q13907 227 aa12.3□□□□□ -0.44
CACNB1-210ENST00000582544 KANK1Q14678 1352 aa12.3□□□□□ -0.44
CACNB1-210ENST00000582544 ANKRD50Q9ULJ7 1429 aa12.29□□□□□ -0.44
CACNB1-210ENST00000582544 TXNDC2Q86VQ3 553 aa12.28□□□□□ -0.44
CACNB1-210ENST00000582544 CHIC2Q9UKJ5 165 aa12.28□□□□□ -0.44
CACNB1-210ENST00000582544 PIP4K2BP78356 416 aa12.27□□□□□ -0.45
CACNB1-210ENST00000582544 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.27□□□□□ -0.45
CACNB1-210ENST00000582544 NKTRP30414 1462 aaKnown RBP12.27□□□□□ -0.45
CACNB1-210ENST00000582544 APLP2Q06481 763 aa12.26□□□□□ -0.45
CACNB1-210ENST00000582544 ROCK1Q13464 1354 aa12.26□□□□□ -0.45
CACNB1-210ENST00000582544 ROBO1Q9Y6N7 1651 aa12.26□□□□□ -0.45
CACNB1-210ENST00000582544 FAM135BQ49AJ0 1406 aa12.24□□□□□ -0.45
CACNB1-210ENST00000582544 SLC52A1Q9NWF4 448 aa12.23□□□□□ -0.45
CACNB1-210ENST00000582544 TMEM94Q12767 1356 aa12.22□□□□□ -0.45
CACNB1-210ENST00000582544 PLEKHG1Q9ULL1 1385 aa12.22□□□□□ -0.45
CACNB1-210ENST00000582544 KCNA6P17658 529 aa12.22□□□□□ -0.45
CACNB1-210ENST00000582544 EID1Q9Y6B2 187 aa12.22□□□□□ -0.45
CACNB1-210ENST00000582544 SPHKAPQ2M3C7 1700 aa12.22□□□□□ -0.45
CACNB1-210ENST00000582544 NRXN3Q9Y4C0 1643 aa12.22□□□□□ -0.45
CACNB1-210ENST00000582544 DIP2AQ14689 1571 aa12.21□□□□□ -0.46
CACNB1-210ENST00000582544 ADAMTS13Q76LX8 1427 aa12.2□□□□□ -0.46
CACNB1-210ENST00000582544 RNF216Q9NWF9 866 aaPredicted RBP12.2□□□□□ -0.46
CACNB1-210ENST00000582544 RIMS2Q9UQ26 1411 aa12.2□□□□□ -0.46
CACNB1-210ENST00000582544 FAM50AQ14320 339 aaKnown RBP12.19□□□□□ -0.46
CACNB1-210ENST00000582544 XRN1Q8IZH2 1706 aaKnown RBP12.18□□□□□ -0.46
CACNB1-210ENST00000582544 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.18□□□□□ -0.46
CACNB1-210ENST00000582544 COL16A1Q07092 1604 aaPredicted RBP12.18□□□□□ -0.46
CACNB1-210ENST00000582544 PHLPP1O60346 1717 aa12.17□□□□□ -0.46
CACNB1-210ENST00000582544 SLC26A8Q96RN1 970 aa12.17□□□□□ -0.46
CACNB1-210ENST00000582544 RGS17Q9UGC6 210 aaPredicted RBP12.17□□□□□ -0.46
CACNB1-210ENST00000582544 STAG3Q9UJ98 1225 aa12.16□□□□□ -0.46
CACNB1-210ENST00000582544 NCOA3Q9Y6Q9 1424 aa12.16□□□□□ -0.46
CACNB1-210ENST00000582544 SETBP1Q9Y6X0 1596 aa12.16□□□□□ -0.46
CACNB1-210ENST00000582544 SETD1AO15047 1707 aaKnown RBP12.15□□□□□ -0.46
CACNB1-210ENST00000582544 CLTCL1P53675 1640 aa12.14□□□□□ -0.47
CACNB1-210ENST00000582544 PIK3R4Q99570 1358 aa12.14□□□□□ -0.47
CACNB1-210ENST00000582544 PTPRUQ92729 1446 aa12.13□□□□□ -0.47
CACNB1-210ENST00000582544 RRBP1Q9P2E9 1410 aaKnown RBP12.13□□□□□ -0.47
CACNB1-210ENST00000582544 AHDC1Q5TGY3 1603 aaPredicted RBP12.13□□□□□ -0.47
CACNB1-210ENST00000582544 TBX22Q9Y458 520 aa12.13□□□□□ -0.47
CACNB1-210ENST00000582544 KIF1BO60333 1816 aa12.13□□□□□ -0.47
CACNB1-210ENST00000582544 TRPM2O94759 1503 aa12.12□□□□□ -0.47
CACNB1-210ENST00000582544 ZBTB22O15209 634 aa12.12□□□□□ -0.47
CACNB1-210ENST00000582544 PROSER2Q86WR7 435 aaPredicted RBP12.12□□□□□ -0.47
CACNB1-210ENST00000582544 RBM33Q96EV2 1170 aaKnown RBP12.12□□□□□ -0.47
CACNB1-210ENST00000582544 SHPRHQ149N8 1683 aa12.12□□□□□ -0.47
CACNB1-210ENST00000582544 NEXMIFQ5QGS0 1516 aa12.11□□□□□ -0.47
CACNB1-210ENST00000582544 NUP155O75694 1391 aa12.1□□□□□ -0.47
CACNB1-210ENST00000582544 MSH6P52701 1360 aa12.1□□□□□ -0.47
CACNB1-210ENST00000582544 HOXD11P31277 338 aaPredicted RBP12.1□□□□□ -0.47
CACNB1-210ENST00000582544 NHSL1Q5SYE7 1610 aa12.09□□□□□ -0.47
CACNB1-210ENST00000582544 NALCNQ8IZF0 1738 aa12.08□□□□□ -0.47
CACNB1-210ENST00000582544 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.08□□□□□ -0.48
CACNB1-210ENST00000582544 NAIPQ13075 1403 aa12.08□□□□□ -0.48
CACNB1-210ENST00000582544 PPLO60437 1756 aa12.07□□□□□ -0.48
CACNB1-210ENST00000582544 DCCP43146 1447 aa12.07□□□□□ -0.48
CACNB1-210ENST00000582544 SLAIN2Q9P270 581 aa12.07□□□□□ -0.48
CACNB1-210ENST00000582544 LRP6O75581 1613 aa12.07□□□□□ -0.48
CACNB1-210ENST00000582544 LAMC1P11047 1609 aa12.07□□□□□ -0.48
CACNB1-210ENST00000582544 HDGFP51858 240 aaKnown RBP12.06□□□□□ -0.48
CACNB1-210ENST00000582544 PRAG1Q86YV5 1406 aa12.05□□□□□ -0.48
CACNB1-210ENST00000582544 NUTM2DQ5VT03 806 aaPredicted RBP12.05□□□□□ -0.48
CACNB1-210ENST00000582544 POTEAQ6S8J7 498 aa12.05□□□□□ -0.48
CACNB1-210ENST00000582544 JCADQ9P266 1359 aa12.05□□□□□ -0.48
CACNB1-210ENST00000582544 PPP1R15AO75807 674 aaPredicted RBP12.04□□□□□ -0.48
CACNB1-210ENST00000582544 METP08581 1390 aa12.04□□□□□ -0.48
CACNB1-210ENST00000582544 MST1RQ04912 1400 aa12.03□□□□□ -0.48
CACNB1-210ENST00000582544 IFT172Q9UG01 1749 aa12.03□□□□□ -0.48
CACNB1-210ENST00000582544 ASXL1Q8IXJ9 1541 aa12.03□□□□□ -0.48
CACNB1-210ENST00000582544 HFM1A2PYH4 1435 aa12.03□□□□□ -0.48
CACNB1-210ENST00000582544 C19orf44Q9H6X5 657 aa12.02□□□□□ -0.49
CACNB1-210ENST00000582544 CHGAP10645 457 aaKnown RBP12.01□□□□□ -0.49
CACNB1-210ENST00000582544 AMOTL2Q9Y2J4 779 aa12.01□□□□□ -0.49
CACNB1-210ENST00000582544 ADGRL3Q9HAR2 1447 aa12.01□□□□□ -0.49
CACNB1-210ENST00000582544 ITGAEP38570 1179 aa12□□□□□ -0.49
CACNB1-210ENST00000582544 CADPS2Q86UW7 1296 aa12□□□□□ -0.49
CACNB1-210ENST00000582544 PPARGC1BQ86YN6 1023 aaKnown RBP12□□□□□ -0.49
CACNB1-210ENST00000582544 BCANQ96GW7 911 aa12□□□□□ -0.49
CACNB1-210ENST00000582544 BRINP3Q76B58 766 aa11.99□□□□□ -0.49
CACNB1-210ENST00000582544 PTCH1Q13635 1447 aa11.99□□□□□ -0.49
CACNB1-210ENST00000582544 SETD5Q9C0A6 1442 aa11.99□□□□□ -0.49
CACNB1-210ENST00000582544 SPATA31A6Q5VVP1 1343 aa11.97□□□□□ -0.49
CACNB1-210ENST00000582544 KNDC1Q76NI1 1749 aa11.95□□□□□ -0.5
CACNB1-210ENST00000582544 COL22A1Q8NFW1 1626 aaPredicted RBP11.94□□□□□ -0.5
CACNB1-210ENST00000582544 ATF3P18847 181 aa11.94□□□□□ -0.5
CACNB1-210ENST00000582544 ROBO2Q9HCK4 1378 aa11.93□□□□□ -0.5
CACNB1-210ENST00000582544 MARF1Q9Y4F3 1742 aaKnown RBP11.93□□□□□ -0.5
CACNB1-210ENST00000582544 C1orf167Q5SNV9 1468 aa11.93□□□□□ -0.5
CACNB1-210ENST00000582544 SPATA31E1Q6ZUB1 1445 aa11.93□□□□□ -0.5
CACNB1-210ENST00000582544 CDC42BPGQ6DT37 1551 aa11.92□□□□□ -0.5
CACNB1-210ENST00000582544 CDK12Q9NYV4 1490 aaPredicted RBP11.92□□□□□ -0.5
CACNB1-210ENST00000582544 PNPLA6Q8IY17 1366 aa11.92□□□□□ -0.5
CACNB1-210ENST00000582544 ZNF326Q5BKZ1 582 aaKnown RBP11.91□□□□□ -0.5
CACNB1-210ENST00000582544 C14orf37Q86TY3 774 aa11.91□□□□□ -0.5
CACNB1-210ENST00000582544 RPGRIP1LQ68CZ1 1315 aa11.9□□□□□ -0.5
CACNB1-210ENST00000582544 TECPR2O15040 1411 aa11.9□□□□□ -0.5
CACNB1-210ENST00000582544 FOXD4L1Q9NU39 408 aa11.9□□□□□ -0.5
CACNB1-210ENST00000582544 RGPD8O14715 1765 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms