RNA–Protein interactions for RNA: ENST00000582513.5

TRAPPC8-210, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 3,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-210ENST00000582513 CHD1O14646 1710 aa20.09■□□□□ 0.81
TRAPPC8-210ENST00000582513 EXOC6Q8TAG9 804 aa20.09■□□□□ 0.81
TRAPPC8-210ENST00000582513 PARD3Q8TEW0 1356 aa20.08■□□□□ 0.8
TRAPPC8-210ENST00000582513 RCAN3Q9UKA8 241 aa20.07■□□□□ 0.8
TRAPPC8-210ENST00000582513 RRP1P56182 461 aaKnown RBP20.07■□□□□ 0.8
TRAPPC8-210ENST00000582513 E9PCH4 1651 aa20.06■□□□□ 0.8
TRAPPC8-210ENST00000582513 PLIN1O60240 522 aa20.03■□□□□ 0.8
TRAPPC8-210ENST00000582513 TMF1P82094 1093 aa20.03■□□□□ 0.8
TRAPPC8-210ENST00000582513 AFAP1Q8N556 730 aa20.03■□□□□ 0.8
TRAPPC8-210ENST00000582513 ERBINQ96RT1 1412 aa20.03■□□□□ 0.8
TRAPPC8-210ENST00000582513 GPRASP1Q5JY77 1395 aa20.03■□□□□ 0.8
TRAPPC8-210ENST00000582513 UNC13BO14795 1591 aa20.02■□□□□ 0.8
TRAPPC8-210ENST00000582513 COL17A1Q9UMD9 1497 aaPredicted RBP20.02■□□□□ 0.8
TRAPPC8-210ENST00000582513 EFCAB2Q5VUJ9 269 aa20.02■□□□□ 0.79
TRAPPC8-210ENST00000582513 TRAPPC8Q9Y2L5 1435 aa20■□□□□ 0.79
TRAPPC8-210ENST00000582513 PRDM4Q9UKN5 801 aa20■□□□□ 0.79
TRAPPC8-210ENST00000582513 MYO5CQ9NQX4 1742 aa19.99■□□□□ 0.79
TRAPPC8-210ENST00000582513 FRAT2O75474 233 aaPredicted RBP19.99■□□□□ 0.79
TRAPPC8-210ENST00000582513 ABCC2Q92887 1545 aa19.99■□□□□ 0.79
TRAPPC8-210ENST00000582513 VGLL3A8MV65 326 aa19.98■□□□□ 0.79
TRAPPC8-210ENST00000582513 MAST1Q9Y2H9 1570 aa19.98■□□□□ 0.79
TRAPPC8-210ENST00000582513 GTF2E1P29083 439 aaPredicted RBP19.98■□□□□ 0.79
TRAPPC8-210ENST00000582513 PRDM15P57071 1507 aaPredicted RBP19.97■□□□□ 0.79
TRAPPC8-210ENST00000582513 IQGAP3Q86VI3 1631 aa19.97■□□□□ 0.79
TRAPPC8-210ENST00000582513 CALD1Q05682 793 aaKnown RBP19.97■□□□□ 0.79
TRAPPC8-210ENST00000582513 DUOX2Q9NRD8 1548 aa19.97■□□□□ 0.79
TRAPPC8-210ENST00000582513 SPAG9O60271 1321 aaKnown RBP19.96■□□□□ 0.79
TRAPPC8-210ENST00000582513 PLCH2O75038 1416 aa19.95■□□□□ 0.78
TRAPPC8-210ENST00000582513 MAPK8IP2Q13387 824 aaPredicted RBP19.95■□□□□ 0.78
TRAPPC8-210ENST00000582513 SKAP1Q86WV1 359 aa19.95■□□□□ 0.78
TRAPPC8-210ENST00000582513 ADAMTS8Q9UP79 889 aa19.95■□□□□ 0.78
TRAPPC8-210ENST00000582513 PRDM10Q9NQV6 1147 aa19.95■□□□□ 0.78
TRAPPC8-210ENST00000582513 PLXNC1O60486 1568 aa19.94■□□□□ 0.78
TRAPPC8-210ENST00000582513 PDE3BQ13370 1112 aa19.93■□□□□ 0.78
TRAPPC8-210ENST00000582513 KNSTRNQ9Y448 316 aa19.93■□□□□ 0.78
TRAPPC8-210ENST00000582513 SHROOM2Q13796 1616 aa19.92■□□□□ 0.78
TRAPPC8-210ENST00000582513 PDCL3Q9H2J4 239 aa19.91■□□□□ 0.78
TRAPPC8-210ENST00000582513 STAC3Q96MF2 364 aa19.89■□□□□ 0.78
TRAPPC8-210ENST00000582513 MAGI2Q86UL8 1455 aa19.89■□□□□ 0.78
TRAPPC8-210ENST00000582513 PDE4AP27815 886 aa19.89■□□□□ 0.77
TRAPPC8-210ENST00000582513 CRBNQ96SW2 442 aa19.88■□□□□ 0.77
TRAPPC8-210ENST00000582513 PPP2R1AP30153 589 aa19.88■□□□□ 0.77
TRAPPC8-210ENST00000582513 ZCCHC11Q5TAX3 1644 aaKnown RBP19.88■□□□□ 0.77
TRAPPC8-210ENST00000582513 EIF2AK4Q9P2K8 1649 aaKnown RBP19.88■□□□□ 0.77
TRAPPC8-210ENST00000582513 ATP10AO60312 1499 aa19.87■□□□□ 0.77
TRAPPC8-210ENST00000582513 KIF3BO15066 747 aa19.87■□□□□ 0.77
TRAPPC8-210ENST00000582513 C20orf194Q5TEA3 1177 aa19.87■□□□□ 0.77
TRAPPC8-210ENST00000582513 WDR43Q15061 677 aaKnown RBP eCLIP19.86■□□□□ 0.77
TRAPPC8-210ENST00000582513 ABCC1P33527 1531 aa19.86■□□□□ 0.77
TRAPPC8-210ENST00000582513 WDR7Q9Y4E6 1490 aa19.85■□□□□ 0.77
TRAPPC8-210ENST00000582513 BLMP54132 1417 aaPredicted RBP19.85■□□□□ 0.77
TRAPPC8-210ENST00000582513 DDRGK1Q96HY6 314 aa19.85■□□□□ 0.77
TRAPPC8-210ENST00000582513 FAM13BQ9NYF5 915 aa19.85■□□□□ 0.77
TRAPPC8-210ENST00000582513 LAMC1P11047 1609 aa19.85■□□□□ 0.77
TRAPPC8-210ENST00000582513 HAP1P54257 671 aaPredicted RBP19.84■□□□□ 0.77
TRAPPC8-210ENST00000582513 CCDC146Q8IYE0 955 aa19.84■□□□□ 0.77
TRAPPC8-210ENST00000582513 POGKQ9P215 609 aa19.84■□□□□ 0.77
TRAPPC8-210ENST00000582513 IPO4Q8TEX9 1081 aaKnown RBP19.83■□□□□ 0.77
TRAPPC8-210ENST00000582513 CFAP70Q5T0N1 1121 aa19.82■□□□□ 0.76
TRAPPC8-210ENST00000582513 PLEKHH1Q9ULM0 1364 aa19.81■□□□□ 0.76
TRAPPC8-210ENST00000582513 ANP32BQ92688 251 aaKnown RBP19.81■□□□□ 0.76
TRAPPC8-210ENST00000582513 MADDQ8WXG6 1647 aa19.8■□□□□ 0.76
TRAPPC8-210ENST00000582513 CHMP4AQ9BY43 222 aa19.8■□□□□ 0.76
TRAPPC8-210ENST00000582513 TCERG1O14776 1098 aaKnown RBP19.8■□□□□ 0.76
TRAPPC8-210ENST00000582513 RNF17Q9BXT8 1623 aaKnown RBP19.79■□□□□ 0.76
TRAPPC8-210ENST00000582513 L1TD1Q5T7N2 865 aaKnown RBP19.79■□□□□ 0.76
TRAPPC8-210ENST00000582513 ZFP91Q96JP5 570 aaPredicted RBP19.79■□□□□ 0.76
TRAPPC8-210ENST00000582513 GZF1Q9H116 711 aaPredicted RBP19.79■□□□□ 0.76
TRAPPC8-210ENST00000582513 SCAPERQ9BY12 1400 aa19.78■□□□□ 0.76
TRAPPC8-210ENST00000582513 CLCN1P35523 988 aa19.78■□□□□ 0.76
TRAPPC8-210ENST00000582513 SCAF11Q99590 1463 aaKnown RBP19.77■□□□□ 0.76
TRAPPC8-210ENST00000582513 CLTCL1P53675 1640 aa19.77■□□□□ 0.76
TRAPPC8-210ENST00000582513 CDK11BP21127 795 aaKnown RBP19.77■□□□□ 0.75
TRAPPC8-210ENST00000582513 ADGRF5Q8IZF2 1346 aa19.77■□□□□ 0.75
TRAPPC8-210ENST00000582513 CHGAP10645 457 aaKnown RBP19.76■□□□□ 0.75
TRAPPC8-210ENST00000582513 CDCA8Q53HL2 280 aa19.76■□□□□ 0.75
TRAPPC8-210ENST00000582513 ZFYVE16Q7Z3T8 1539 aa19.76■□□□□ 0.75
TRAPPC8-210ENST00000582513 ZMYM4Q5VZL5 1548 aa19.76■□□□□ 0.75
TRAPPC8-210ENST00000582513 UGGT1Q9NYU2 1555 aa19.76■□□□□ 0.75
TRAPPC8-210ENST00000582513 DUSP27Q5VZP5 1158 aa19.76■□□□□ 0.75
TRAPPC8-210ENST00000582513 TRPM2O94759 1503 aa19.75■□□□□ 0.75
TRAPPC8-210ENST00000582513 NCBP3Q53F19 620 aaKnown RBP19.74■□□□□ 0.75
TRAPPC8-210ENST00000582513 BACH2Q9BYV9 841 aa19.74■□□□□ 0.75
TRAPPC8-210ENST00000582513 KANK1Q14678 1352 aa19.74■□□□□ 0.75
TRAPPC8-210ENST00000582513 NCLP19338 710 aaKnown RBP19.74■□□□□ 0.75
TRAPPC8-210ENST00000582513 IQGAP1P46940 1657 aa19.73■□□□□ 0.75
TRAPPC8-210ENST00000582513 GOLGA2Q08379 1002 aa19.73■□□□□ 0.75
TRAPPC8-210ENST00000582513 APAF1O14727 1248 aa19.73■□□□□ 0.75
TRAPPC8-210ENST00000582513 PTPRTO14522 1441 aa19.73■□□□□ 0.75
TRAPPC8-210ENST00000582513 FANCAO15360 1455 aa19.73■□□□□ 0.75
TRAPPC8-210ENST00000582513 TNNT2P45379 298 aaPredicted RBP19.72■□□□□ 0.75
TRAPPC8-210ENST00000582513 UHRF1BP1LA0JNW5 1464 aa19.72■□□□□ 0.75
TRAPPC8-210ENST00000582513 SPHKAPQ2M3C7 1700 aa19.72■□□□□ 0.75
TRAPPC8-210ENST00000582513 SPINK5Q9NQ38 1064 aaPredicted RBP19.72■□□□□ 0.75
TRAPPC8-210ENST00000582513 RTEL1-TNFRSF6BF6WH68 1400 aa19.71■□□□□ 0.75
TRAPPC8-210ENST00000582513 E9PSI1 815 aa19.71■□□□□ 0.75
TRAPPC8-210ENST00000582513 PANK2Q9BZ23 570 aa19.71■□□□□ 0.75
TRAPPC8-210ENST00000582513 CARD14Q9BXL6 1004 aa19.7■□□□□ 0.74
TRAPPC8-210ENST00000582513 CLASP1Q7Z460 1538 aa19.7■□□□□ 0.74
TRAPPC8-210ENST00000582513 ASXL1Q8IXJ9 1541 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms