RNA–Protein interactions for RNA: ENST00000581160.5

CDK5RAP3-220, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-220ENST00000581160 TMEM2Q9UHN6 1383 aa13.14□□□□□ -0.31
CDK5RAP3-220ENST00000581160 CEP170BQ9Y4F5 1589 aaPredicted RBP13.13□□□□□ -0.31
CDK5RAP3-220ENST00000581160 MYO5BQ9ULV0 1848 aa13.13□□□□□ -0.31
CDK5RAP3-220ENST00000581160 ZFYVE9O95405 1425 aa13.13□□□□□ -0.31
CDK5RAP3-220ENST00000581160 RIMS2Q9UQ26 1411 aa13.12□□□□□ -0.31
CDK5RAP3-220ENST00000581160 ZNF142P52746 1687 aaPredicted RBP13.12□□□□□ -0.31
CDK5RAP3-220ENST00000581160 NBPF8Q3BBV2 869 aa13.11□□□□□ -0.31
CDK5RAP3-220ENST00000581160 TXNDC2Q86VQ3 553 aa13.11□□□□□ -0.31
CDK5RAP3-220ENST00000581160 EID1Q9Y6B2 187 aa13.11□□□□□ -0.31
CDK5RAP3-220ENST00000581160 NEXMIFQ5QGS0 1516 aa13.11□□□□□ -0.31
CDK5RAP3-220ENST00000581160 ADGRF5Q8IZF2 1346 aa13.11□□□□□ -0.31
CDK5RAP3-220ENST00000581160 ARHGAP23Q9P227 1491 aa13.1□□□□□ -0.31
CDK5RAP3-220ENST00000581160 SLIT1O75093 1534 aa13.1□□□□□ -0.31
CDK5RAP3-220ENST00000581160 LTKP29376 864 aa13.1□□□□□ -0.31
CDK5RAP3-220ENST00000581160 NUTM2DQ5VT03 806 aaPredicted RBP13.1□□□□□ -0.31
CDK5RAP3-220ENST00000581160 MYOM2P54296 1465 aa13.1□□□□□ -0.31
CDK5RAP3-220ENST00000581160 PPLO60437 1756 aa13.09□□□□□ -0.31
CDK5RAP3-220ENST00000581160 ANKLE2Q86XL3 938 aa13.09□□□□□ -0.31
CDK5RAP3-220ENST00000581160 IFT172Q9UG01 1749 aa13.09□□□□□ -0.31
CDK5RAP3-220ENST00000581160 NRXN1Q9ULB1 1477 aa13.08□□□□□ -0.32
CDK5RAP3-220ENST00000581160 PRAG1Q86YV5 1406 aa13.07□□□□□ -0.32
CDK5RAP3-220ENST00000581160 C14orf93Q9H972 538 aaKnown RBP13.07□□□□□ -0.32
CDK5RAP3-220ENST00000581160 LMTK3Q96Q04 1460 aa13.05□□□□□ -0.32
CDK5RAP3-220ENST00000581160 CFAP70Q5T0N1 1121 aa13.05□□□□□ -0.32
CDK5RAP3-220ENST00000581160 PLEKHG1Q9ULL1 1385 aa13.05□□□□□ -0.32
CDK5RAP3-220ENST00000581160 HSPA2P54652 639 aa13.04□□□□□ -0.32
CDK5RAP3-220ENST00000581160 PIK3C2GO75747 1445 aa13.04□□□□□ -0.32
CDK5RAP3-220ENST00000581160 SCAF11Q99590 1463 aaKnown RBP13.04□□□□□ -0.32
CDK5RAP3-220ENST00000581160 NBPF1Q3BBV0 1214 aa13.03□□□□□ -0.32
CDK5RAP3-220ENST00000581160 BCANQ96GW7 911 aa13.03□□□□□ -0.32
CDK5RAP3-220ENST00000581160 NCKAP5LQ9HCH0 1330 aa13.03□□□□□ -0.32
CDK5RAP3-220ENST00000581160 AEBP2Q6ZN18 517 aaPredicted RBP13.02□□□□□ -0.33
CDK5RAP3-220ENST00000581160 TBX22Q9Y458 520 aa13.02□□□□□ -0.33
CDK5RAP3-220ENST00000581160 KIAA1210Q9ULL0 1709 aa13□□□□□ -0.33
CDK5RAP3-220ENST00000581160 MED14O60244 1454 aa13□□□□□ -0.33
CDK5RAP3-220ENST00000581160 RALGAPBQ86X10 1494 aa13□□□□□ -0.33
CDK5RAP3-220ENST00000581160 TRPM1Q7Z4N2 1603 aa12.99□□□□□ -0.33
CDK5RAP3-220ENST00000581160 ALKQ9UM73 1620 aa12.99□□□□□ -0.33
CDK5RAP3-220ENST00000581160 SETBP1Q9Y6X0 1596 aa12.99□□□□□ -0.33
CDK5RAP3-220ENST00000581160 ADAMTS13Q76LX8 1427 aa12.99□□□□□ -0.33
CDK5RAP3-220ENST00000581160 CARD11Q9BXL7 1154 aa12.99□□□□□ -0.33
CDK5RAP3-220ENST00000581160 SENP3Q9H4L4 574 aaPredicted RBP12.99□□□□□ -0.33
CDK5RAP3-220ENST00000581160 NPHP4O75161 1426 aaPredicted RBP12.98□□□□□ -0.33
CDK5RAP3-220ENST00000581160 ROCK2O75116 1388 aaKnown RBP12.98□□□□□ -0.33
CDK5RAP3-220ENST00000581160 GPRASP1Q5JY77 1395 aa12.98□□□□□ -0.33
CDK5RAP3-220ENST00000581160 TMEM132EQ6IEE7 984 aa12.98□□□□□ -0.33
CDK5RAP3-220ENST00000581160 SLC26A8Q96RN1 970 aa12.98□□□□□ -0.33
CDK5RAP3-220ENST00000581160 NRXN3Q9Y4C0 1643 aa12.97□□□□□ -0.33
CDK5RAP3-220ENST00000581160 LAMC1P11047 1609 aa12.96□□□□□ -0.33
CDK5RAP3-220ENST00000581160 POLR1AO95602 1720 aaPredicted RBP12.96□□□□□ -0.34
CDK5RAP3-220ENST00000581160 METP08581 1390 aa12.95□□□□□ -0.34
CDK5RAP3-220ENST00000581160 DMRT2Q9Y5R5 561 aa12.95□□□□□ -0.34
CDK5RAP3-220ENST00000581160 PIK3R4Q99570 1358 aa12.94□□□□□ -0.34
CDK5RAP3-220ENST00000581160 ADGRB1O14514 1584 aa12.94□□□□□ -0.34
CDK5RAP3-220ENST00000581160 IQGAP1P46940 1657 aa12.94□□□□□ -0.34
CDK5RAP3-220ENST00000581160 EIF4G2P78344 907 aaKnown RBP eCLIP12.94□□□□□ -0.34
CDK5RAP3-220ENST00000581160 SIRT1Q96EB6 747 aa12.94□□□□□ -0.34
CDK5RAP3-220ENST00000581160 STRCQ7RTU9 1775 aa12.94□□□□□ -0.34
CDK5RAP3-220ENST00000581160 DIP2AQ14689 1571 aa12.94□□□□□ -0.34
CDK5RAP3-220ENST00000581160 SETD1AO15047 1707 aaKnown RBP12.93□□□□□ -0.34
CDK5RAP3-220ENST00000581160 LRPPRCP42704 1394 aaKnown RBP12.93□□□□□ -0.34
CDK5RAP3-220ENST00000581160 ABCC11Q96J66 1382 aa12.93□□□□□ -0.34
CDK5RAP3-220ENST00000581160 YTHDC2Q9H6S0 1430 aaKnown RBP12.92□□□□□ -0.34
CDK5RAP3-220ENST00000581160 STK26Q9P289 416 aa12.92□□□□□ -0.34
CDK5RAP3-220ENST00000581160 TRAK1Q9UPV9 953 aa12.92□□□□□ -0.34
CDK5RAP3-220ENST00000581160 AMOTL2Q9Y2J4 779 aa12.92□□□□□ -0.34
CDK5RAP3-220ENST00000581160 HSPA5P11021 654 aaKnown RBP12.91□□□□□ -0.34
CDK5RAP3-220ENST00000581160 KCNA6P17658 529 aa12.91□□□□□ -0.34
CDK5RAP3-220ENST00000581160 ASXL1Q8IXJ9 1541 aa12.91□□□□□ -0.34
CDK5RAP3-220ENST00000581160 PTPRUQ92729 1446 aa12.9□□□□□ -0.34
CDK5RAP3-220ENST00000581160 USP47Q96K76 1375 aa12.9□□□□□ -0.34
CDK5RAP3-220ENST00000581160 ST20-MTHFSA0A0A6YYL1 179 aa12.89□□□□□ -0.35
CDK5RAP3-220ENST00000581160 EIF3AQ14152 1382 aaKnown RBP12.88□□□□□ -0.35
CDK5RAP3-220ENST00000581160 TECPR2O15040 1411 aa12.88□□□□□ -0.35
CDK5RAP3-220ENST00000581160 SLC24A1O60721 1099 aa12.87□□□□□ -0.35
CDK5RAP3-220ENST00000581160 POGKQ9P215 609 aa12.87□□□□□ -0.35
CDK5RAP3-220ENST00000581160 CHD2O14647 1828 aaKnown RBP12.87□□□□□ -0.35
CDK5RAP3-220ENST00000581160 DLC1Q96QB1 1528 aa12.87□□□□□ -0.35
CDK5RAP3-220ENST00000581160 WAPLQ7Z5K2 1190 aa12.86□□□□□ -0.35
CDK5RAP3-220ENST00000581160 PRAM1Q96QH2 718 aa12.86□□□□□ -0.35
CDK5RAP3-220ENST00000581160 HIRIP3Q9BW71 556 aaPredicted RBP12.86□□□□□ -0.35
CDK5RAP3-220ENST00000581160 FAM135BQ49AJ0 1406 aa12.86□□□□□ -0.35
CDK5RAP3-220ENST00000581160 CENPJQ9HC77 1338 aaPredicted RBP12.86□□□□□ -0.35
CDK5RAP3-220ENST00000581160 TESK2Q96S53 571 aa12.85□□□□□ -0.35
CDK5RAP3-220ENST00000581160 ROBO2Q9HCK4 1378 aa12.84□□□□□ -0.35
CDK5RAP3-220ENST00000581160 KNDC1Q76NI1 1749 aa12.84□□□□□ -0.35
CDK5RAP3-220ENST00000581160 ZNF316A6NFI3 1004 aaPredicted RBP12.83□□□□□ -0.36
CDK5RAP3-220ENST00000581160 CPS1P31327 1500 aa12.83□□□□□ -0.36
CDK5RAP3-220ENST00000581160 XRN1Q8IZH2 1706 aaKnown RBP12.82□□□□□ -0.36
CDK5RAP3-220ENST00000581160 PTCH1Q13635 1447 aa12.82□□□□□ -0.36
CDK5RAP3-220ENST00000581160 PROSER2Q86WR7 435 aaPredicted RBP12.82□□□□□ -0.36
CDK5RAP3-220ENST00000581160 ARHGEF28Q8N1W1 1705 aaKnown RBP12.82□□□□□ -0.36
CDK5RAP3-220ENST00000581160 PLEKHH1Q9ULM0 1364 aa12.81□□□□□ -0.36
CDK5RAP3-220ENST00000581160 SBNO2Q9Y2G9 1366 aa12.81□□□□□ -0.36
CDK5RAP3-220ENST00000581160 NWD1Q149M9 1564 aa12.81□□□□□ -0.36
CDK5RAP3-220ENST00000581160 TMF1P82094 1093 aa12.81□□□□□ -0.36
CDK5RAP3-220ENST00000581160 SAFB2Q14151 953 aaKnown RBP eCLIP12.81□□□□□ -0.36
CDK5RAP3-220ENST00000581160 ZNF335Q9H4Z2 1342 aaPredicted RBP12.8□□□□□ -0.36
CDK5RAP3-220ENST00000581160 C11orf95C9JLR9 678 aaPredicted RBP12.79□□□□□ -0.36
CDK5RAP3-220ENST00000581160 PUS7Q96PZ0 661 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms