RNA–Protein interactions for RNA: ENST00000580044.5

CDH8-206, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-206ENST00000580044 PRKD2Q9BZL6 878 aa8.26□□□□□ -1.09
CDH8-206ENST00000580044 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.26□□□□□ -1.09
CDH8-206ENST00000580044 TSHZ2Q9NRE2 1034 aa8.26□□□□□ -1.09
CDH8-206ENST00000580044 DNAJB2P25686 324 aa8.25□□□□□ -1.09
CDH8-206ENST00000580044 PPP1R18Q6NYC8 613 aa8.25□□□□□ -1.09
CDH8-206ENST00000580044 PPARGC1BQ86YN6 1023 aaKnown RBP8.25□□□□□ -1.09
CDH8-206ENST00000580044 MROH2BQ7Z745 1585 aa8.25□□□□□ -1.09
CDH8-206ENST00000580044 WIZO95785 1651 aa8.24□□□□□ -1.09
CDH8-206ENST00000580044 KMT5BQ4FZB7 885 aa8.24□□□□□ -1.09
CDH8-206ENST00000580044 SMYD5Q6GMV2 418 aa8.24□□□□□ -1.09
CDH8-206ENST00000580044 TTC13Q8NBP0 860 aa8.24□□□□□ -1.09
CDH8-206ENST00000580044 PCDHB3Q9Y5E6 796 aa8.24□□□□□ -1.09
CDH8-206ENST00000580044 V9GY48 417 aaPredicted RBP8.24□□□□□ -1.09
CDH8-206ENST00000580044 APLP1P51693 650 aa8.23□□□□□ -1.09
CDH8-206ENST00000580044 COPS2P61201 443 aa8.23□□□□□ -1.09
CDH8-206ENST00000580044 NPDC1Q9NQX5 325 aaPredicted RBP8.23□□□□□ -1.09
CDH8-206ENST00000580044 KCNV2Q8TDN2 545 aa8.22□□□□□ -1.09
CDH8-206ENST00000580044 TMUB1Q9BVT8 246 aa8.22□□□□□ -1.09
CDH8-206ENST00000580044 FCHSD2O94868 740 aa8.21□□□□□ -1.1
CDH8-206ENST00000580044 EYA1Q99502 592 aa8.21□□□□□ -1.1
CDH8-206ENST00000580044 TOP2AP11388 1531 aaKnown RBP8.2□□□□□ -1.1
CDH8-206ENST00000580044 C3orf80F5H4A9 247 aa8.2□□□□□ -1.1
CDH8-206ENST00000580044 MLLT3P42568 568 aaPredicted RBP8.2□□□□□ -1.1
CDH8-206ENST00000580044 PTGDRQ13258 359 aa8.2□□□□□ -1.1
CDH8-206ENST00000580044 ZNF516Q92618 1163 aa8.2□□□□□ -1.1
CDH8-206ENST00000580044 CECR2Q9BXF3 1484 aa8.19□□□□□ -1.1
CDH8-206ENST00000580044 ZPR1O75312 459 aa8.19□□□□□ -1.1
CDH8-206ENST00000580044 OATP04181 439 aa8.19□□□□□ -1.1
CDH8-206ENST00000580044 NRG2O14511 850 aaPredicted RBP8.18□□□□□ -1.1
CDH8-206ENST00000580044 TRAF7Q6Q0C0 670 aa8.18□□□□□ -1.1
CDH8-206ENST00000580044 SMARCA4P51532 1647 aa8.17□□□□□ -1.1
CDH8-206ENST00000580044 TMEM134Q9H6X4 195 aa8.16□□□□□ -1.1
CDH8-206ENST00000580044 UNC13AQ9UPW8 1703 aa8.15□□□□□ -1.1
CDH8-206ENST00000580044 EEA1Q15075 1411 aa8.15□□□□□ -1.1
CDH8-206ENST00000580044 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.15□□□□□ -1.1
CDH8-206ENST00000580044 RCCD1A6NED2 376 aa8.15□□□□□ -1.1
CDH8-206ENST00000580044 NR1I2O75469 434 aa8.15□□□□□ -1.1
CDH8-206ENST00000580044 NKX2-3Q8TAU0 364 aa8.15□□□□□ -1.1
CDH8-206ENST00000580044 PDZRN3Q9UPQ7 1066 aa8.15□□□□□ -1.1
CDH8-206ENST00000580044 WRNQ14191 1432 aaPredicted RBP eCLIP8.14□□□□□ -1.11
CDH8-206ENST00000580044 ADGRG1Q9Y653 693 aa8.14□□□□□ -1.11
CDH8-206ENST00000580044 ACTN4O43707 911 aaKnown RBP8.13□□□□□ -1.11
CDH8-206ENST00000580044 CFHP08603 1231 aa8.13□□□□□ -1.11
CDH8-206ENST00000580044 HIC1Q14526 733 aa8.13□□□□□ -1.11
CDH8-206ENST00000580044 BLOC1S3Q6QNY0 202 aa8.13□□□□□ -1.11
CDH8-206ENST00000580044 SMARCA2P51531 1590 aa8.12□□□□□ -1.11
CDH8-206ENST00000580044 SEMA3EO15041 775 aa8.11□□□□□ -1.11
CDH8-206ENST00000580044 SLC19A1P41440 591 aa8.11□□□□□ -1.11
CDH8-206ENST00000580044 TULP1O00294 542 aaPredicted RBP8.1□□□□□ -1.11
CDH8-206ENST00000580044 FAM9AQ8IZU1 332 aaPredicted RBP8.09□□□□□ -1.11
CDH8-206ENST00000580044 ANKLE1Q8NAG6 615 aa8.08□□□□□ -1.12
CDH8-206ENST00000580044 PEG3Q9GZU2 1588 aa8.07□□□□□ -1.12
CDH8-206ENST00000580044 RNF223E7ERA6 249 aa8.07□□□□□ -1.12
CDH8-206ENST00000580044 FAM161AQ3B820 660 aa8.07□□□□□ -1.12
CDH8-206ENST00000580044 PKDCCQ504Y2 493 aa8.07□□□□□ -1.12
CDH8-206ENST00000580044 RDH13Q8NBN7 331 aa8.07□□□□□ -1.12
CDH8-206ENST00000580044 SLC6A16Q9GZN6 736 aa8.07□□□□□ -1.12
CDH8-206ENST00000580044 ADH1BP00325 375 aa8.06□□□□□ -1.12
CDH8-206ENST00000580044 SULF1Q8IWU6 871 aa8.06□□□□□ -1.12
CDH8-206ENST00000580044 PXYLP1Q8TE99 480 aa8.06□□□□□ -1.12
CDH8-206ENST00000580044 GNPATO15228 680 aa8.05□□□□□ -1.12
CDH8-206ENST00000580044 PLCB2Q00722 1185 aa8.05□□□□□ -1.12
CDH8-206ENST00000580044 GRIPAP1Q4V328 841 aa8.05□□□□□ -1.12
CDH8-206ENST00000580044 ZNF598Q86UK7 904 aaKnown RBP8.05□□□□□ -1.12
CDH8-206ENST00000580044 TNIKQ9UKE5 1360 aa8.05□□□□□ -1.12
CDH8-206ENST00000580044 CCDC88BA6NC98 1476 aa8.05□□□□□ -1.12
CDH8-206ENST00000580044 S1PR4O95977 384 aa8.04□□□□□ -1.12
CDH8-206ENST00000580044 ZNF787Q6DD87 383 aa8.04□□□□□ -1.12
CDH8-206ENST00000580044 ABCC8Q09428 1581 aa8.04□□□□□ -1.12
CDH8-206ENST00000580044 CEP162Q5TB80 1403 aa8.03□□□□□ -1.12
CDH8-206ENST00000580044 KIF21BO75037 1637 aa8.03□□□□□ -1.12
CDH8-206ENST00000580044 TLL1O43897 1013 aa8.03□□□□□ -1.12
CDH8-206ENST00000580044 SPRYD7Q5W111 196 aa8.03□□□□□ -1.12
CDH8-206ENST00000580044 METTL3Q86U44 580 aaKnown RBP8.03□□□□□ -1.12
CDH8-206ENST00000580044 SCUBE3Q8IX30 993 aa8.03□□□□□ -1.12
CDH8-206ENST00000580044 DAXXQ9UER7 740 aaPredicted RBP8.03□□□□□ -1.12
CDH8-206ENST00000580044 GOLGA3Q08378 1498 aa8.02□□□□□ -1.13
CDH8-206ENST00000580044 TESPA1A2RU30 521 aaPredicted RBP8.02□□□□□ -1.13
CDH8-206ENST00000580044 SLC10A3P09131 477 aa8.02□□□□□ -1.13
CDH8-206ENST00000580044 RBM26Q5T8P6 1007 aaKnown RBP8.02□□□□□ -1.13
CDH8-206ENST00000580044 SPSB2Q99619 263 aa8.02□□□□□ -1.13
CDH8-206ENST00000580044 DDX11L8A8MPP1 907 aa8.01□□□□□ -1.13
CDH8-206ENST00000580044 DGAT1O75907 488 aa8.01□□□□□ -1.13
CDH8-206ENST00000580044 HAP1P54257 671 aaPredicted RBP8.01□□□□□ -1.13
CDH8-206ENST00000580044 ZNF697Q5TEC3 545 aa8.01□□□□□ -1.13
CDH8-206ENST00000580044 CCER1Q8TC90 406 aaPredicted RBP8.01□□□□□ -1.13
CDH8-206ENST00000580044 PPEF1O14829 653 aaPredicted RBP8□□□□□ -1.13
CDH8-206ENST00000580044 CD2BP2O95400 341 aaKnown RBP7.99□□□□□ -1.13
CDH8-206ENST00000580044 FMNL1O95466 1100 aaPredicted RBP7.99□□□□□ -1.13
CDH8-206ENST00000580044 ATP6V1AP38606 617 aa7.99□□□□□ -1.13
CDH8-206ENST00000580044 PUS10Q3MIT2 529 aaKnown RBP7.99□□□□□ -1.13
CDH8-206ENST00000580044 GPIHBP1Q8IV16 184 aa7.99□□□□□ -1.13
CDH8-206ENST00000580044 ZBTB24O43167 697 aaPredicted RBP7.98□□□□□ -1.13
CDH8-206ENST00000580044 PRR20EP86478 221 aa7.98□□□□□ -1.13
CDH8-206ENST00000580044 PRR20CP86479 221 aa7.98□□□□□ -1.13
CDH8-206ENST00000580044 PRR20DP86480 221 aa7.98□□□□□ -1.13
CDH8-206ENST00000580044 PRR20BP86481 221 aa7.98□□□□□ -1.13
CDH8-206ENST00000580044 PRR20AP86496 221 aa7.98□□□□□ -1.13
CDH8-206ENST00000580044 BAZ1BQ9UIG0 1483 aaKnown RBP7.98□□□□□ -1.13
CDH8-206ENST00000580044 CEP164Q9UPV0 1460 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms