RNA–Protein interactions for RNA: ENST00000579662.5

ITGB4-206, Transcript of integrin subunit beta 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGB4, Length 5,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-206ENST00000579662 TROQ12816 1431 aaPredicted RBP18.82■□□□□ 0.6
ITGB4-206ENST00000579662 PSME1Q06323 249 aa18.82■□□□□ 0.6
ITGB4-206ENST00000579662 GTF2E1P29083 439 aaPredicted RBP18.82■□□□□ 0.6
ITGB4-206ENST00000579662 RIPK4P57078 832 aa18.82■□□□□ 0.6
ITGB4-206ENST00000579662 ELL2O00472 640 aaPredicted RBP18.81■□□□□ 0.6
ITGB4-206ENST00000579662 C9orf84Q5VXU9 1444 aa18.81■□□□□ 0.6
ITGB4-206ENST00000579662 KIF16BQ96L93 1317 aa18.81■□□□□ 0.6
ITGB4-206ENST00000579662 SNAPC4Q5SXM2 1469 aa18.81■□□□□ 0.6
ITGB4-206ENST00000579662 CRBNQ96SW2 442 aa18.8■□□□□ 0.6
ITGB4-206ENST00000579662 BCL2L13Q9BXK5 485 aa18.8■□□□□ 0.6
ITGB4-206ENST00000579662 ANKRD45Q5TZF3 282 aa18.8■□□□□ 0.6
ITGB4-206ENST00000579662 BRD4O60885 1362 aaPredicted RBP18.79■□□□□ 0.6
ITGB4-206ENST00000579662 G3V3G9 751 aa18.79■□□□□ 0.6
ITGB4-206ENST00000579662 GNAI1P63096 354 aa18.79■□□□□ 0.6
ITGB4-206ENST00000579662 DCAF8Q5TAQ9 597 aa18.79■□□□□ 0.6
ITGB4-206ENST00000579662 EXOC6Q8TAG9 804 aa18.79■□□□□ 0.6
ITGB4-206ENST00000579662 KIAA2012Q0VF49 1180 aa18.79■□□□□ 0.6
ITGB4-206ENST00000579662 LRRFIP1Q32MZ4 808 aaKnown RBP18.79■□□□□ 0.6
ITGB4-206ENST00000579662 TIAM1Q13009 1591 aa18.78■□□□□ 0.6
ITGB4-206ENST00000579662 AAMPQ13685 434 aa18.78■□□□□ 0.6
ITGB4-206ENST00000579662 KIAA1107Q9UPP5 1409 aa18.77■□□□□ 0.6
ITGB4-206ENST00000579662 DZIP1LQ8IYY4 767 aaKnown RBP18.77■□□□□ 0.6
ITGB4-206ENST00000579662 SCAPERQ9BY12 1400 aa18.77■□□□□ 0.6
ITGB4-206ENST00000579662 DDX58O95786 925 aaKnown RBP18.77■□□□□ 0.6
ITGB4-206ENST00000579662 AFAP1Q8N556 730 aa18.77■□□□□ 0.6
ITGB4-206ENST00000579662 COG6Q9Y2V7 657 aa18.77■□□□□ 0.6
ITGB4-206ENST00000579662 PLIN1O60240 522 aa18.77■□□□□ 0.6
ITGB4-206ENST00000579662 FRAT2O75474 233 aaPredicted RBP18.76■□□□□ 0.59
ITGB4-206ENST00000579662 CLSTN1O94985 981 aa18.76■□□□□ 0.59
ITGB4-206ENST00000579662 SUPT6HQ7KZ85 1726 aaKnown RBP18.75■□□□□ 0.59
ITGB4-206ENST00000579662 GOLGA6L3A6NEY3 463 aa18.75■□□□□ 0.59
ITGB4-206ENST00000579662 PHF14O94880 888 aa18.75■□□□□ 0.59
ITGB4-206ENST00000579662 RTN4Q9NQC3 1192 aaKnown RBP18.75■□□□□ 0.59
ITGB4-206ENST00000579662 PDE4AP27815 886 aa18.74■□□□□ 0.59
ITGB4-206ENST00000579662 RILPL2Q969X0 211 aa18.74■□□□□ 0.59
ITGB4-206ENST00000579662 C9orf78Q9NZ63 289 aaPredicted RBP18.74■□□□□ 0.59
ITGB4-206ENST00000579662 RUFY2Q8WXA3 655 aa18.74■□□□□ 0.59
ITGB4-206ENST00000579662 GZF1Q9H116 711 aaPredicted RBP18.74■□□□□ 0.59
ITGB4-206ENST00000579662 DDX11L8A8MPP1 907 aa18.74■□□□□ 0.59
ITGB4-206ENST00000579662 WASHC2AQ641Q2 1341 aa18.73■□□□□ 0.59
ITGB4-206ENST00000579662 ATF3P18847 181 aa18.72■□□□□ 0.59
ITGB4-206ENST00000579662 EIF2S2P20042 333 aaKnown RBP18.72■□□□□ 0.59
ITGB4-206ENST00000579662 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.72■□□□□ 0.59
ITGB4-206ENST00000579662 CABP2Q9NPB3 220 aa18.71■□□□□ 0.59
ITGB4-206ENST00000579662 TOMM22Q9NS69 142 aa18.71■□□□□ 0.59
ITGB4-206ENST00000579662 DIAPH3Q9NSV4 1193 aa18.71■□□□□ 0.59
ITGB4-206ENST00000579662 KIAA0586Q9BVV6 1533 aa18.71■□□□□ 0.59
ITGB4-206ENST00000579662 REC8O95072 547 aa18.71■□□□□ 0.59
ITGB4-206ENST00000579662 NOL8Q76FK4 1167 aaKnown RBP18.71■□□□□ 0.59
ITGB4-206ENST00000579662 ABCA10Q8WWZ4 1543 aa18.7■□□□□ 0.58
ITGB4-206ENST00000579662 ATP6V1DQ9Y5K8 247 aa18.7■□□□□ 0.58
ITGB4-206ENST00000579662 DAPK1P53355 1430 aa18.7■□□□□ 0.58
ITGB4-206ENST00000579662 GGNBP2Q9H3C7 697 aa18.69■□□□□ 0.58
ITGB4-206ENST00000579662 TSPYL4Q9UJ04 414 aa18.69■□□□□ 0.58
ITGB4-206ENST00000579662 LAMC3Q9Y6N6 1575 aa18.69■□□□□ 0.58
ITGB4-206ENST00000579662 RAPGEF4Q8WZA2 1011 aa18.69■□□□□ 0.58
ITGB4-206ENST00000579662 HSP90AB4PQ58FF6 505 aa18.68■□□□□ 0.58
ITGB4-206ENST00000579662 TMEM132EQ6IEE7 984 aa18.68■□□□□ 0.58
ITGB4-206ENST00000579662 FKBP5Q13451 457 aaPredicted RBP18.68■□□□□ 0.58
ITGB4-206ENST00000579662 CFAP70Q5T0N1 1121 aa18.68■□□□□ 0.58
ITGB4-206ENST00000579662 USP35Q9P2H5 1018 aa18.68■□□□□ 0.58
ITGB4-206ENST00000579662 FOXD4L1Q9NU39 408 aa18.67■□□□□ 0.58
ITGB4-206ENST00000579662 RASSF8Q8NHQ8 419 aa18.67■□□□□ 0.58
ITGB4-206ENST00000579662 IFIT2P09913 472 aaKnown RBP18.67■□□□□ 0.58
ITGB4-206ENST00000579662 CUL7Q14999 1698 aa18.67■□□□□ 0.58
ITGB4-206ENST00000579662 GPRASP1Q5JY77 1395 aa18.66■□□□□ 0.58
ITGB4-206ENST00000579662 SLC52A1Q9NWF4 448 aa18.66■□□□□ 0.58
ITGB4-206ENST00000579662 H3BQV1 296 aa18.65■□□□□ 0.58
ITGB4-206ENST00000579662 IFFO2Q5TF58 517 aa18.65■□□□□ 0.58
ITGB4-206ENST00000579662 SF3A1Q15459 793 aaKnown RBP18.65■□□□□ 0.58
ITGB4-206ENST00000579662 IQGAP2Q13576 1575 aa18.65■□□□□ 0.58
ITGB4-206ENST00000579662 RPGRIP1LQ68CZ1 1315 aa18.65■□□□□ 0.58
ITGB4-206ENST00000579662 ZKSCAN1P17029 563 aaPredicted RBP18.65■□□□□ 0.58
ITGB4-206ENST00000579662 SKOR2Q2VWA4 1001 aaPredicted RBP18.65■□□□□ 0.58
ITGB4-206ENST00000579662 FAM184AQ8NB25 1140 aa18.64■□□□□ 0.58
ITGB4-206ENST00000579662 HMOX1P09601 288 aa18.64■□□□□ 0.57
ITGB4-206ENST00000579662 G3BP1Q13283 466 aaKnown RBP eCLIP18.64■□□□□ 0.57
ITGB4-206ENST00000579662 EPRSP07814 1512 aaKnown RBP18.63■□□□□ 0.57
ITGB4-206ENST00000579662 SYNE3Q6ZMZ3 975 aa18.63■□□□□ 0.57
ITGB4-206ENST00000579662 AMOTL1Q8IY63 956 aa18.62■□□□□ 0.57
ITGB4-206ENST00000579662 PPP2R1AP30153 589 aa18.62■□□□□ 0.57
ITGB4-206ENST00000579662 NLRP6P59044 892 aa18.62■□□□□ 0.57
ITGB4-206ENST00000579662 GAS2L2Q8NHY3 880 aa18.62■□□□□ 0.57
ITGB4-206ENST00000579662 MTHFSP49914 203 aa18.62■□□□□ 0.57
ITGB4-206ENST00000579662 TXNDC2Q86VQ3 553 aa18.62■□□□□ 0.57
ITGB4-206ENST00000579662 NOL10Q9BSC4 688 aaKnown RBP18.62■□□□□ 0.57
ITGB4-206ENST00000579662 CPLX2Q6PUV4 134 aaKnown RBP18.62■□□□□ 0.57
ITGB4-206ENST00000579662 AKAP17AQ02040 695 aaKnown RBP18.61■□□□□ 0.57
ITGB4-206ENST00000579662 RNF20Q5VTR2 975 aa18.6■□□□□ 0.57
ITGB4-206ENST00000579662 NECTIN2Q92692 538 aa18.6■□□□□ 0.57
ITGB4-206ENST00000579662 ADAMTS8Q9UP79 889 aa18.6■□□□□ 0.57
ITGB4-206ENST00000579662 ERC2O15083 957 aa18.6■□□□□ 0.57
ITGB4-206ENST00000579662 INTS3Q68E01 1043 aaKnown RBP18.59■□□□□ 0.57
ITGB4-206ENST00000579662 THEMISQ8N1K5 641 aaPredicted RBP18.59■□□□□ 0.57
ITGB4-206ENST00000579662 PRAM1Q96QH2 718 aa18.59■□□□□ 0.57
ITGB4-206ENST00000579662 ANKRD30BQ9BXX2 1392 aa18.59■□□□□ 0.57
ITGB4-206ENST00000579662 SMG6Q86US8 1419 aaKnown RBP18.59■□□□□ 0.57
ITGB4-206ENST00000579662 NLRP2Q9NX02 1062 aa18.58■□□□□ 0.57
ITGB4-206ENST00000579662 ZNF692Q9BU19 519 aaPredicted RBP18.58■□□□□ 0.56
ITGB4-206ENST00000579662 MARCH6O60337 910 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms