RNA–Protein interactions for RNA: ENST00000579289.1

SUPT4H1-203, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 3

Gene SUPT4H1, Length 318 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-203ENST00000579289 CROCC2H7BZ55 1655 aa17.96■□□□□ 0.47
SUPT4H1-203ENST00000579289 SHPRHQ149N8 1683 aa17.95■□□□□ 0.46
SUPT4H1-203ENST00000579289 SPATA31A6Q5VVP1 1343 aa17.95■□□□□ 0.46
SUPT4H1-203ENST00000579289 NCOA3Q9Y6Q9 1424 aa17.94■□□□□ 0.46
SUPT4H1-203ENST00000579289 RRP7BPQ9NSQ0 103 aa17.93■□□□□ 0.46
SUPT4H1-203ENST00000579289 CDK12Q9NYV4 1490 aaPredicted RBP17.93■□□□□ 0.46
SUPT4H1-203ENST00000579289 PLEKHG1Q9ULL1 1385 aa17.91■□□□□ 0.46
SUPT4H1-203ENST00000579289 ZNF772Q68DY9 489 aaPredicted RBP17.91■□□□□ 0.46
SUPT4H1-203ENST00000579289 TRIM52Q96A61 297 aa17.91■□□□□ 0.46
SUPT4H1-203ENST00000579289 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.9■□□□□ 0.465e-10■■■□□ 17.7
SUPT4H1-203ENST00000579289 ADAMTS13Q76LX8 1427 aa17.89■□□□□ 0.46
SUPT4H1-203ENST00000579289 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.89■□□□□ 0.46
SUPT4H1-203ENST00000579289 MYO5BQ9ULV0 1848 aa17.88■□□□□ 0.45
SUPT4H1-203ENST00000579289 SLC52A1Q9NWF4 448 aa17.88■□□□□ 0.45
SUPT4H1-203ENST00000579289 STAG3Q9UJ98 1225 aa17.88■□□□□ 0.45
SUPT4H1-203ENST00000579289 TBX22Q9Y458 520 aa17.88■□□□□ 0.45
SUPT4H1-203ENST00000579289 DAPK1P53355 1430 aa17.88■□□□□ 0.45
SUPT4H1-203ENST00000579289 VPS8Q8N3P4 1428 aa17.88■□□□□ 0.45
SUPT4H1-203ENST00000579289 TMEM131LA2VDJ0 1609 aa17.87■□□□□ 0.45
SUPT4H1-203ENST00000579289 RXRBP28702 533 aa17.86■□□□□ 0.45
SUPT4H1-203ENST00000579289 RIMS2Q9UQ26 1411 aa17.84■□□□□ 0.45
SUPT4H1-203ENST00000579289 BRINP3Q76B58 766 aa17.84■□□□□ 0.45
SUPT4H1-203ENST00000579289 PTPN23Q9H3S7 1636 aa17.83■□□□□ 0.45
SUPT4H1-203ENST00000579289 RGS12O14924 1447 aa17.83■□□□□ 0.45
SUPT4H1-203ENST00000579289 PTPRUQ92729 1446 aa17.83■□□□□ 0.45
SUPT4H1-203ENST00000579289 KANK1Q14678 1352 aa17.83■□□□□ 0.45
SUPT4H1-203ENST00000579289 SETD5Q9C0A6 1442 aa17.82■□□□□ 0.44
SUPT4H1-203ENST00000579289 C19orf44Q9H6X5 657 aa17.82■□□□□ 0.44
SUPT4H1-203ENST00000579289 GCC2Q8IWJ2 1684 aa17.82■□□□□ 0.44
SUPT4H1-203ENST00000579289 RPRD2Q5VT52 1461 aaKnown RBP17.82■□□□□ 0.44
SUPT4H1-203ENST00000579289 AFF2P51816 1311 aa17.79■□□□□ 0.44
SUPT4H1-203ENST00000579289 CADPS2Q86UW7 1296 aa17.79■□□□□ 0.44
SUPT4H1-203ENST00000579289 NHSL1Q5SYE7 1610 aa17.79■□□□□ 0.44
SUPT4H1-203ENST00000579289 PIK3R4Q99570 1358 aa17.79■□□□□ 0.44
SUPT4H1-203ENST00000579289 MEX3CQ5U5Q3 659 aaKnown RBP17.78■□□□□ 0.44
SUPT4H1-203ENST00000579289 EP400Q96L91 3159 aa17.78■□□□□ 0.44
SUPT4H1-203ENST00000579289 ADGRL2O95490 1459 aa17.77■□□□□ 0.44
SUPT4H1-203ENST00000579289 ASXL1Q8IXJ9 1541 aa17.77■□□□□ 0.43
SUPT4H1-203ENST00000579289 MST1RQ04912 1400 aa17.76■□□□□ 0.43
SUPT4H1-203ENST00000579289 CHIC2Q9UKJ5 165 aa17.75■□□□□ 0.43
SUPT4H1-203ENST00000579289 ANKRD30AQ9BXX3 1397 aa17.75■□□□□ 0.43
SUPT4H1-203ENST00000579289 DCCP43146 1447 aa17.74■□□□□ 0.43
SUPT4H1-203ENST00000579289 NRXN3Q9Y4C0 1643 aa17.74■□□□□ 0.43
SUPT4H1-203ENST00000579289 XRN1Q8IZH2 1706 aaKnown RBP17.73■□□□□ 0.43
SUPT4H1-203ENST00000579289 NUTM2BA6NNL0 878 aaPredicted RBP17.73■□□□□ 0.43
SUPT4H1-203ENST00000579289 NUTM2EB1AL46 878 aaPredicted RBP17.73■□□□□ 0.43
SUPT4H1-203ENST00000579289 NUTM2AQ8IVF1 878 aaPredicted RBP17.73■□□□□ 0.43
SUPT4H1-203ENST00000579289 BCANQ96GW7 911 aa17.73■□□□□ 0.43
SUPT4H1-203ENST00000579289 UNC13BO14795 1591 aa17.72■□□□□ 0.43
SUPT4H1-203ENST00000579289 PNPLA6Q8IY17 1366 aa17.72■□□□□ 0.43
SUPT4H1-203ENST00000579289 ATF3P18847 181 aa17.72■□□□□ 0.43
SUPT4H1-203ENST00000579289 RBM6P78332 1123 aaKnown RBP17.72■□□□□ 0.43
SUPT4H1-203ENST00000579289 QTRT2Q9H974 415 aaKnown RBP17.72■□□□□ 0.43
SUPT4H1-203ENST00000579289 NUTM2DQ5VT03 806 aaPredicted RBP17.71■□□□□ 0.43
SUPT4H1-203ENST00000579289 AMOTL2Q9Y2J4 779 aa17.71■□□□□ 0.43
SUPT4H1-203ENST00000579289 TRPM2O94759 1503 aa17.71■□□□□ 0.43
SUPT4H1-203ENST00000579289 DDX17Q92841 729 aaKnown RBP17.7■□□□□ 0.42
SUPT4H1-203ENST00000579289 E9PCH4 1651 aa17.69■□□□□ 0.42
SUPT4H1-203ENST00000579289 SETBP1Q9Y6X0 1596 aa17.69■□□□□ 0.42
SUPT4H1-203ENST00000579289 LAMC1P11047 1609 aa17.69■□□□□ 0.42
SUPT4H1-203ENST00000579289 HDGFP51858 240 aaKnown RBP17.68■□□□□ 0.42
SUPT4H1-203ENST00000579289 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.68■□□□□ 0.42
SUPT4H1-203ENST00000579289 ANKRD50Q9ULJ7 1429 aa17.68■□□□□ 0.42
SUPT4H1-203ENST00000579289 PPP1R15AO75807 674 aaPredicted RBP17.67■□□□□ 0.42
SUPT4H1-203ENST00000579289 C14orf37Q86TY3 774 aa17.66■□□□□ 0.42
SUPT4H1-203ENST00000579289 LRRC59Q96AG4 307 aaKnown RBP17.66■□□□□ 0.42
SUPT4H1-203ENST00000579289 LOC105371045A0A1W2PR82 267 aa17.65■□□□□ 0.42
SUPT4H1-203ENST00000579289 C8orf37Q96NL8 207 aa17.65■□□□□ 0.42
SUPT4H1-203ENST00000579289 METP08581 1390 aa17.64■□□□□ 0.41
SUPT4H1-203ENST00000579289 FNBP4Q8N3X1 1017 aaPredicted RBP17.62■□□□□ 0.41
SUPT4H1-203ENST00000579289 NALCNQ8IZF0 1738 aa17.61■□□□□ 0.41
SUPT4H1-203ENST00000579289 ATRNO75882 1429 aa17.61■□□□□ 0.41
SUPT4H1-203ENST00000579289 ADGRL3Q9HAR2 1447 aa17.61■□□□□ 0.41
SUPT4H1-203ENST00000579289 ATAD2Q6PL18 1390 aa17.6■□□□□ 0.41
SUPT4H1-203ENST00000579289 SOS2Q07890 1332 aaPredicted RBP17.59■□□□□ 0.41
SUPT4H1-203ENST00000579289 IQGAP3Q86VI3 1631 aa17.58■□□□□ 0.41
SUPT4H1-203ENST00000579289 C1orf167Q5SNV9 1468 aa17.58■□□□□ 0.41
SUPT4H1-203ENST00000579289 CHGAP10645 457 aaKnown RBP17.57■□□□□ 0.4
SUPT4H1-203ENST00000579289 BCL9LQ86UU0 1499 aa17.56■□□□□ 0.4
SUPT4H1-203ENST00000579289 ADAMTS2O95450 1211 aa17.56■□□□□ 0.4
SUPT4H1-203ENST00000579289 COL22A1Q8NFW1 1626 aaPredicted RBP17.56■□□□□ 0.4
SUPT4H1-203ENST00000579289 NGLY1Q96IV0 654 aa17.55■□□□□ 0.4
SUPT4H1-203ENST00000579289 ZRANB1Q9UGI0 708 aa17.54■□□□□ 0.4
SUPT4H1-203ENST00000579289 PTCH1Q13635 1447 aa17.54■□□□□ 0.4
SUPT4H1-203ENST00000579289 MYOM2P54296 1465 aa17.53■□□□□ 0.4
SUPT4H1-203ENST00000579289 ORAI2Q96SN7 254 aa17.53■□□□□ 0.4
SUPT4H1-203ENST00000579289 USP21Q9UK80 565 aa17.53■□□□□ 0.4
SUPT4H1-203ENST00000579289 TRPC5Q9UL62 973 aaPredicted RBP17.52■□□□□ 0.4
SUPT4H1-203ENST00000579289 NEXMIFQ5QGS0 1516 aa17.51■□□□□ 0.39
SUPT4H1-203ENST00000579289 PRAG1Q86YV5 1406 aa17.5■□□□□ 0.39
SUPT4H1-203ENST00000579289 CCDC125Q86Z20 511 aa17.48■□□□□ 0.39
SUPT4H1-203ENST00000579289 ROBO2Q9HCK4 1378 aa17.48■□□□□ 0.39
SUPT4H1-203ENST00000579289 ROCK1Q13464 1354 aa17.47■□□□□ 0.39
SUPT4H1-203ENST00000579289 GLI3P10071 1580 aa17.46■□□□□ 0.39
SUPT4H1-203ENST00000579289 PXDNQ92626 1479 aa17.46■□□□□ 0.39
SUPT4H1-203ENST00000579289 MARF1Q9Y4F3 1742 aaKnown RBP17.45■□□□□ 0.38
SUPT4H1-203ENST00000579289 SPHKAPQ2M3C7 1700 aa17.44■□□□□ 0.38
SUPT4H1-203ENST00000579289 NUP155O75694 1391 aa17.44■□□□□ 0.38
SUPT4H1-203ENST00000579289 FAM50AQ14320 339 aaKnown RBP17.44■□□□□ 0.38
SUPT4H1-203ENST00000579289 LRP5O75197 1615 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms