RNA–Protein interactions for RNA: ENST00000579066.1

CTC1-206, Transcript of CST telomere replication complex component 1, humanhuman

TSL 3

Gene CTC1, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-206ENST00000579066 SLC52A1Q9NWF4 448 aa17.27■□□□□ 0.36
CTC1-206ENST00000579066 TMEM131LA2VDJ0 1609 aa17.27■□□□□ 0.36
CTC1-206ENST00000579066 IQGAP3Q86VI3 1631 aa17.27■□□□□ 0.36
CTC1-206ENST00000579066 MED1Q15648 1581 aaPredicted RBP17.25■□□□□ 0.35
CTC1-206ENST00000579066 NUTM2DQ5VT03 806 aaPredicted RBP17.25■□□□□ 0.35
CTC1-206ENST00000579066 NUP155O75694 1391 aa17.25■□□□□ 0.35
CTC1-206ENST00000579066 ZFYVE9O95405 1425 aa17.24■□□□□ 0.35
CTC1-206ENST00000579066 RIMS2Q9UQ26 1411 aa17.24■□□□□ 0.35
CTC1-206ENST00000579066 TMEM94Q12767 1356 aa17.23■□□□□ 0.35
CTC1-206ENST00000579066 KCNA6P17658 529 aa17.22■□□□□ 0.35
CTC1-206ENST00000579066 PPP1R15AO75807 674 aaPredicted RBP17.21■□□□□ 0.35
CTC1-206ENST00000579066 PROSER2Q86WR7 435 aaPredicted RBP17.21■□□□□ 0.35
CTC1-206ENST00000579066 NWD1Q149M9 1564 aa17.19■□□□□ 0.34
CTC1-206ENST00000579066 PLEKHG1Q9ULL1 1385 aa17.19■□□□□ 0.34
CTC1-206ENST00000579066 SOCS7O14512 581 aa17.19■□□□□ 0.34
CTC1-206ENST00000579066 RRBP1Q9P2E9 1410 aaKnown RBP17.17■□□□□ 0.34
CTC1-206ENST00000579066 CHD2O14647 1828 aaKnown RBP17.17■□□□□ 0.34
CTC1-206ENST00000579066 SPHKAPQ2M3C7 1700 aa17.16■□□□□ 0.34
CTC1-206ENST00000579066 NKTRP30414 1462 aaKnown RBP17.15■□□□□ 0.34
CTC1-206ENST00000579066 ADAMTS13Q76LX8 1427 aa17.13■□□□□ 0.33
CTC1-206ENST00000579066 ROBO1Q9Y6N7 1651 aa17.13■□□□□ 0.33
CTC1-206ENST00000579066 NAIPQ13075 1403 aa17.13■□□□□ 0.33
CTC1-206ENST00000579066 HDGFP51858 240 aaKnown RBP17.12■□□□□ 0.33
CTC1-206ENST00000579066 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.12■□□□□ 0.33
CTC1-206ENST00000579066 TBX22Q9Y458 520 aa17.11■□□□□ 0.33
CTC1-206ENST00000579066 PHF23Q9BUL5 403 aaPredicted RBP17.1■□□□□ 0.33
CTC1-206ENST00000579066 FAM135BQ49AJ0 1406 aa17.1■□□□□ 0.33
CTC1-206ENST00000579066 CLTCL1P53675 1640 aa17.1■□□□□ 0.33
CTC1-206ENST00000579066 MSH6P52701 1360 aa17.09■□□□□ 0.33
CTC1-206ENST00000579066 NRXN3Q9Y4C0 1643 aa17.08■□□□□ 0.32
CTC1-206ENST00000579066 PTPRUQ92729 1446 aa17.08■□□□□ 0.32
CTC1-206ENST00000579066 ZNF326Q5BKZ1 582 aaKnown RBP17.07■□□□□ 0.32
CTC1-206ENST00000579066 TRIM52Q96A61 297 aa17.07■□□□□ 0.32
CTC1-206ENST00000579066 DIP2AQ14689 1571 aa17.06■□□□□ 0.32
CTC1-206ENST00000579066 C14orf37Q86TY3 774 aa17.05■□□□□ 0.32
CTC1-206ENST00000579066 TRPM2O94759 1503 aa17.05■□□□□ 0.32
CTC1-206ENST00000579066 SLAIN2Q9P270 581 aa17.04■□□□□ 0.32
CTC1-206ENST00000579066 AMOTL2Q9Y2J4 779 aa17.04■□□□□ 0.32
CTC1-206ENST00000579066 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.04■□□□□ 0.32
CTC1-206ENST00000579066 NEXMIFQ5QGS0 1516 aa17.03■□□□□ 0.32
CTC1-206ENST00000579066 PHLPP1O60346 1717 aa17.03■□□□□ 0.32
CTC1-206ENST00000579066 KIF1BO60333 1816 aa17.02■□□□□ 0.31
CTC1-206ENST00000579066 HFM1A2PYH4 1435 aa17.02■□□□□ 0.31
CTC1-206ENST00000579066 SETBP1Q9Y6X0 1596 aa17.02■□□□□ 0.31
CTC1-206ENST00000579066 RGS17Q9UGC6 210 aaPredicted RBP17.01■□□□□ 0.31
CTC1-206ENST00000579066 PIK3R4Q99570 1358 aa17.01■□□□□ 0.31
CTC1-206ENST00000579066 FOXD1Q16676 465 aa17■□□□□ 0.31
CTC1-206ENST00000579066 XRN1Q8IZH2 1706 aaKnown RBP17■□□□□ 0.31
CTC1-206ENST00000579066 METP08581 1390 aa17■□□□□ 0.31
CTC1-206ENST00000579066 SLC4A1APQ9BWU0 796 aaKnown RBP16.98■□□□□ 0.31
CTC1-206ENST00000579066 NCOA3Q9Y6Q9 1424 aa16.97■□□□□ 0.31
CTC1-206ENST00000579066 COL16A1Q07092 1604 aaPredicted RBP16.97■□□□□ 0.31
CTC1-206ENST00000579066 C19orf44Q9H6X5 657 aa16.96■□□□□ 0.31
CTC1-206ENST00000579066 ATF3P18847 181 aa16.95■□□□□ 0.3
CTC1-206ENST00000579066 CADPS2Q86UW7 1296 aa16.94■□□□□ 0.3
CTC1-206ENST00000579066 SETD1AO15047 1707 aaKnown RBP16.93■□□□□ 0.3
CTC1-206ENST00000579066 POTEAQ6S8J7 498 aa16.92■□□□□ 0.3
CTC1-206ENST00000579066 NALCNQ8IZF0 1738 aa16.92■□□□□ 0.3
CTC1-206ENST00000579066 JCADQ9P266 1359 aa16.91■□□□□ 0.3
CTC1-206ENST00000579066 BRINP3Q76B58 766 aa16.91■□□□□ 0.3
CTC1-206ENST00000579066 PPLO60437 1756 aa16.9■□□□□ 0.3
CTC1-206ENST00000579066 LRP6O75581 1613 aa16.9■□□□□ 0.3
CTC1-206ENST00000579066 AHDC1Q5TGY3 1603 aaPredicted RBP16.9■□□□□ 0.3
CTC1-206ENST00000579066 MST1RQ04912 1400 aa16.89■□□□□ 0.29
CTC1-206ENST00000579066 DDX17Q92841 729 aaKnown RBP16.88■□□□□ 0.29
CTC1-206ENST00000579066 ASXL1Q8IXJ9 1541 aa16.87■□□□□ 0.29
CTC1-206ENST00000579066 DCCP43146 1447 aa16.87■□□□□ 0.29
CTC1-206ENST00000579066 ADGRL3Q9HAR2 1447 aa16.87■□□□□ 0.29
CTC1-206ENST00000579066 VGFO15240 615 aaPredicted RBP16.86■□□□□ 0.29
CTC1-206ENST00000579066 RGL3Q3MIN7 710 aa16.86■□□□□ 0.29
CTC1-206ENST00000579066 MPHOSPH9Q99550 1183 aa16.86■□□□□ 0.29
CTC1-206ENST00000579066 ROBO2Q9HCK4 1378 aa16.86■□□□□ 0.29
CTC1-206ENST00000579066 SHPRHQ149N8 1683 aa16.85■□□□□ 0.29
CTC1-206ENST00000579066 RPGRIP1LQ68CZ1 1315 aa16.84■□□□□ 0.29
CTC1-206ENST00000579066 ADGRF5Q8IZF2 1346 aa16.84■□□□□ 0.29
CTC1-206ENST00000579066 NHSL1Q5SYE7 1610 aa16.84■□□□□ 0.29
CTC1-206ENST00000579066 CCDC144AA2RUR9 1427 aa16.83■□□□□ 0.28
CTC1-206ENST00000579066 NUTM2BA6NNL0 878 aaPredicted RBP16.83■□□□□ 0.28
CTC1-206ENST00000579066 NUTM2EB1AL46 878 aaPredicted RBP16.83■□□□□ 0.28
CTC1-206ENST00000579066 NUTM2AQ8IVF1 878 aaPredicted RBP16.83■□□□□ 0.28
CTC1-206ENST00000579066 MEX3CQ5U5Q3 659 aaKnown RBP16.82■□□□□ 0.28
CTC1-206ENST00000579066 IFT172Q9UG01 1749 aa16.82■□□□□ 0.28
CTC1-206ENST00000579066 PTCH1Q13635 1447 aa16.81■□□□□ 0.28
CTC1-206ENST00000579066 SPATA31E1Q6ZUB1 1445 aa16.8■□□□□ 0.28
CTC1-206ENST00000579066 SPATA31A6Q5VVP1 1343 aa16.8■□□□□ 0.28
CTC1-206ENST00000579066 C1orf167Q5SNV9 1468 aa16.8■□□□□ 0.28
CTC1-206ENST00000579066 ORAI2Q96SN7 254 aa16.79■□□□□ 0.28
CTC1-206ENST00000579066 STK26Q9P289 416 aa16.79■□□□□ 0.28
CTC1-206ENST00000579066 SETD5Q9C0A6 1442 aa16.79■□□□□ 0.28
CTC1-206ENST00000579066 TMEM132EQ6IEE7 984 aa16.77■□□□□ 0.28
CTC1-206ENST00000579066 WAPLQ7Z5K2 1190 aa16.75■□□□□ 0.27
CTC1-206ENST00000579066 PRAG1Q86YV5 1406 aa16.75■□□□□ 0.27
CTC1-206ENST00000579066 RAB3GAP2Q9H2M9 1393 aa16.75■□□□□ 0.27
CTC1-206ENST00000579066 NUTM2FA1L443 756 aa16.74■□□□□ 0.27
CTC1-206ENST00000579066 PNPLA6Q8IY17 1366 aa16.74■□□□□ 0.27
CTC1-206ENST00000579066 PLEKHH1Q9ULM0 1364 aa16.74■□□□□ 0.27
CTC1-206ENST00000579066 LRRC59Q96AG4 307 aaKnown RBP16.73■□□□□ 0.27
CTC1-206ENST00000579066 ANKRD30BQ9BXX2 1392 aa16.73■□□□□ 0.27
CTC1-206ENST00000579066 PIK3C2GO75747 1445 aa16.72■□□□□ 0.27
CTC1-206ENST00000579066 LRPPRCP42704 1394 aaKnown RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms