RNA–Protein interactions for RNA: ENST00000578998.1

RBFOX3-202, Transcript of RNA binding fox-1 homolog 3, humanhuman

TSL 2

Gene RBFOX3, Length 3,072 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3-202ENST00000578998 WDR7Q9Y4E6 1490 aa17.2■□□□□ 0.34
RBFOX3-202ENST00000578998 MS4A1P11836 297 aa17.2■□□□□ 0.34
RBFOX3-202ENST00000578998 IQGAP3Q86VI3 1631 aa17.19■□□□□ 0.34
RBFOX3-202ENST00000578998 ADGRF5Q8IZF2 1346 aa17.19■□□□□ 0.34
RBFOX3-202ENST00000578998 ABCC2Q92887 1545 aa17.19■□□□□ 0.34
RBFOX3-202ENST00000578998 DAXXQ9UER7 740 aaPredicted RBP17.19■□□□□ 0.34
RBFOX3-202ENST00000578998 RRP7AQ9Y3A4 280 aaKnown RBP17.19■□□□□ 0.34
RBFOX3-202ENST00000578998 NUTM2DQ5VT03 806 aaPredicted RBP17.18■□□□□ 0.34
RBFOX3-202ENST00000578998 DMRT2Q9Y5R5 561 aa17.18■□□□□ 0.34
RBFOX3-202ENST00000578998 MAST1Q9Y2H9 1570 aa17.18■□□□□ 0.34
RBFOX3-202ENST00000578998 CANXP27824 592 aaKnown RBP17.17■□□□□ 0.34
RBFOX3-202ENST00000578998 TRAK1Q9UPV9 953 aa17.17■□□□□ 0.34
RBFOX3-202ENST00000578998 ZMYM4Q5VZL5 1548 aa17.17■□□□□ 0.34
RBFOX3-202ENST00000578998 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.17■□□□□ 0.34
RBFOX3-202ENST00000578998 EIF2AK4Q9P2K8 1649 aaKnown RBP17.16■□□□□ 0.34
RBFOX3-202ENST00000578998 SCAPERQ9BY12 1400 aa17.16■□□□□ 0.34
RBFOX3-202ENST00000578998 SLFN5Q08AF3 891 aa17.15■□□□□ 0.34
RBFOX3-202ENST00000578998 FRAT1Q92837 279 aaPredicted RBP17.15■□□□□ 0.34
RBFOX3-202ENST00000578998 CARD14Q9BXL6 1004 aa17.15■□□□□ 0.34
RBFOX3-202ENST00000578998 KANK1Q14678 1352 aa17.14■□□□□ 0.33
RBFOX3-202ENST00000578998 ATP10AO60312 1499 aa17.14■□□□□ 0.33
RBFOX3-202ENST00000578998 SCAF11Q99590 1463 aaKnown RBP17.14■□□□□ 0.33
RBFOX3-202ENST00000578998 PLXNC1O60486 1568 aa17.14■□□□□ 0.33
RBFOX3-202ENST00000578998 TMEM132EQ6IEE7 984 aa17.13■□□□□ 0.33
RBFOX3-202ENST00000578998 RTN4Q9NQC3 1192 aaKnown RBP17.13■□□□□ 0.33
RBFOX3-202ENST00000578998 CENPQQ7L2Z9 268 aaPredicted RBP17.13■□□□□ 0.33
RBFOX3-202ENST00000578998 GGT6Q6P531 493 aa17.12■□□□□ 0.33
RBFOX3-202ENST00000578998 UGGT1Q9NYU2 1555 aa17.12■□□□□ 0.33
RBFOX3-202ENST00000578998 SAFB2Q14151 953 aaKnown RBP eCLIP17.11■□□□□ 0.33
RBFOX3-202ENST00000578998 BCL2L13Q9BXK5 485 aa17.11■□□□□ 0.33
RBFOX3-202ENST00000578998 EIF3AQ14152 1382 aaKnown RBP17.11■□□□□ 0.33
RBFOX3-202ENST00000578998 PANK1Q8TE04 598 aa17.1■□□□□ 0.33
RBFOX3-202ENST00000578998 SLC12A5Q9H2X9 1139 aa17.1■□□□□ 0.33
RBFOX3-202ENST00000578998 KDM2BQ8NHM5 1336 aa17.1■□□□□ 0.33
RBFOX3-202ENST00000578998 COG6Q9Y2V7 657 aa17.1■□□□□ 0.33
RBFOX3-202ENST00000578998 ZNF521Q96K83 1311 aa17.1■□□□□ 0.33
RBFOX3-202ENST00000578998 ASXL1Q8IXJ9 1541 aa17.09■□□□□ 0.33
RBFOX3-202ENST00000578998 MORC1Q86VD1 984 aa17.09■□□□□ 0.33
RBFOX3-202ENST00000578998 ABCC1P33527 1531 aa17.09■□□□□ 0.33
RBFOX3-202ENST00000578998 MADDQ8WXG6 1647 aa17.08■□□□□ 0.33
RBFOX3-202ENST00000578998 ZCCHC11Q5TAX3 1644 aaKnown RBP17.08■□□□□ 0.32
RBFOX3-202ENST00000578998 DDRGK1Q96HY6 314 aa17.08■□□□□ 0.32
RBFOX3-202ENST00000578998 LAMC1P11047 1609 aa17.07■□□□□ 0.32
RBFOX3-202ENST00000578998 FAM161AQ3B820 660 aa17.07■□□□□ 0.32
RBFOX3-202ENST00000578998 CLTCL1P53675 1640 aa17.07■□□□□ 0.32
RBFOX3-202ENST00000578998 IGHDP01880 384 aa17.06■□□□□ 0.32
RBFOX3-202ENST00000578998 IL27Q8NEV9 243 aa17.06■□□□□ 0.32
RBFOX3-202ENST00000578998 CLUAP1Q96AJ1 413 aa17.06■□□□□ 0.32
RBFOX3-202ENST00000578998 PPM1GO15355 546 aaPredicted RBP17.05■□□□□ 0.32
RBFOX3-202ENST00000578998 E9PSI1 815 aa17.05■□□□□ 0.32
RBFOX3-202ENST00000578998 C8orf34Q49A92 452 aa17.05■□□□□ 0.32
RBFOX3-202ENST00000578998 TNNQ9UQP3 1299 aa17.04■□□□□ 0.32
RBFOX3-202ENST00000578998 FANCAO15360 1455 aa17.04■□□□□ 0.32
RBFOX3-202ENST00000578998 CENPJQ9HC77 1338 aaPredicted RBP17.04■□□□□ 0.32
RBFOX3-202ENST00000578998 RNF17Q9BXT8 1623 aaKnown RBP17.03■□□□□ 0.32
RBFOX3-202ENST00000578998 CFAP65Q6ZU64 1925 aaKnown RBP17.03■□□□□ 0.32
RBFOX3-202ENST00000578998 TRPM2O94759 1503 aa17.03■□□□□ 0.32
RBFOX3-202ENST00000578998 WWC1Q8IX03 1113 aa17.02■□□□□ 0.32
RBFOX3-202ENST00000578998 INSRP06213 1382 aa17.02■□□□□ 0.32
RBFOX3-202ENST00000578998 PIK3C2GO75747 1445 aa17.02■□□□□ 0.32
RBFOX3-202ENST00000578998 SHROOM2Q13796 1616 aa17.01■□□□□ 0.31
RBFOX3-202ENST00000578998 ZFYVE16Q7Z3T8 1539 aa17.01■□□□□ 0.31
RBFOX3-202ENST00000578998 PTPRTO14522 1441 aa17.01■□□□□ 0.31
RBFOX3-202ENST00000578998 NFKBIBQ15653 356 aa17.01■□□□□ 0.31
RBFOX3-202ENST00000578998 NKTRP30414 1462 aaKnown RBP17.01■□□□□ 0.31
RBFOX3-202ENST00000578998 IQGAP1P46940 1657 aa17.01■□□□□ 0.31
RBFOX3-202ENST00000578998 ERVK-7P63135 1459 aa17■□□□□ 0.31
RBFOX3-202ENST00000578998 NOS1P29475 1434 aa17■□□□□ 0.31
RBFOX3-202ENST00000578998 MTHFSP49914 203 aa17■□□□□ 0.31
RBFOX3-202ENST00000578998 TCP11L2Q8N4U5 519 aa17■□□□□ 0.31
RBFOX3-202ENST00000578998 STK26Q9P289 416 aa17■□□□□ 0.31
RBFOX3-202ENST00000578998 ADGRL1O94910 1474 aa17■□□□□ 0.31
RBFOX3-202ENST00000578998 NSD3Q9BZ95 1437 aa17■□□□□ 0.31
RBFOX3-202ENST00000578998 SYNMO15061 1565 aa17■□□□□ 0.31
RBFOX3-202ENST00000578998 TRMT2AQ8IZ69 625 aaKnown RBP16.99■□□□□ 0.31
RBFOX3-202ENST00000578998 SPHKAPQ2M3C7 1700 aa16.99■□□□□ 0.31
RBFOX3-202ENST00000578998 STAC3Q96MF2 364 aa16.99■□□□□ 0.31
RBFOX3-202ENST00000578998 ATP7AQ04656 1500 aa16.98■□□□□ 0.31
RBFOX3-202ENST00000578998 RTEL1-TNFRSF6BF6WH68 1400 aa16.97■□□□□ 0.31
RBFOX3-202ENST00000578998 U2AF1L5P0DN76 240 aaPredicted RBP16.97■□□□□ 0.31
RBFOX3-202ENST00000578998 U2AF1Q01081 240 aaKnown RBP eCLIP16.97■□□□□ 0.31
RBFOX3-202ENST00000578998 SEC24BO95487 1268 aa16.96■□□□□ 0.31
RBFOX3-202ENST00000578998 CABP2Q9NPB3 220 aa16.96■□□□□ 0.31
RBFOX3-202ENST00000578998 U2SURPO15042 1029 aaKnown RBP16.95■□□□□ 0.3
RBFOX3-202ENST00000578998 KDM5AP29375 1690 aaKnown RBP16.94■□□□□ 0.3
RBFOX3-202ENST00000578998 FRAT2O75474 233 aaPredicted RBP16.94■□□□□ 0.3
RBFOX3-202ENST00000578998 RLBP1P12271 317 aa16.94■□□□□ 0.3
RBFOX3-202ENST00000578998 USP35Q9P2H5 1018 aa16.94■□□□□ 0.3
RBFOX3-202ENST00000578998 RUNDC1Q96C34 613 aa16.94■□□□□ 0.3
RBFOX3-202ENST00000578998 CEP152O94986 1710 aa16.94■□□□□ 0.3
RBFOX3-202ENST00000578998 MYOM1P52179 1685 aa16.93■□□□□ 0.3
RBFOX3-202ENST00000578998 NPM1P06748 294 aaKnown RBP eCLIP16.93■□□□□ 0.3
RBFOX3-202ENST00000578998 SLKQ9H2G2 1235 aaPredicted RBP16.93■□□□□ 0.3
RBFOX3-202ENST00000578998 NPC1L1Q9UHC9 1359 aa16.93■□□□□ 0.3
RBFOX3-202ENST00000578998 CGNL1Q0VF96 1302 aa16.92■□□□□ 0.3
RBFOX3-202ENST00000578998 TSR2Q969E8 191 aaKnown RBP16.92■□□□□ 0.3
RBFOX3-202ENST00000578998 ABCA6Q8N139 1617 aa16.91■□□□□ 0.3
RBFOX3-202ENST00000578998 RARSP54136 660 aaKnown RBP16.91■□□□□ 0.3
RBFOX3-202ENST00000578998 CFAP53Q96M91 514 aa16.91■□□□□ 0.3
RBFOX3-202ENST00000578998 BRPF3Q9ULD4 1205 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms