RNA–Protein interactions for RNA: ENST00000578658.1

TRAPPC8-205, Transcript of trafficking protein particle complex 8, humanhuman

TSL 5

Gene TRAPPC8, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-205ENST00000578658 TSR3Q9UJK0 312 aaKnown RBP9.86□□□□□ -0.83
TRAPPC8-205ENST00000578658 HPS5Q9UPZ3 1129 aa9.86□□□□□ -0.83
TRAPPC8-205ENST00000578658 SLF2Q8IX21 1173 aa9.84□□□□□ -0.83
TRAPPC8-205ENST00000578658 KRI1Q8N9T8 703 aaKnown RBP9.84□□□□□ -0.83
TRAPPC8-205ENST00000578658 WBP1LQ9NX94 342 aa9.84□□□□□ -0.83
TRAPPC8-205ENST00000578658 NLRP7Q8WX94 980 aa9.83□□□□□ -0.84
TRAPPC8-205ENST00000578658 RNF40O75150 1001 aa9.82□□□□□ -0.84
TRAPPC8-205ENST00000578658 PPP4CP60510 307 aa9.82□□□□□ -0.84
TRAPPC8-205ENST00000578658 NYAP1Q6ZVC0 841 aa9.82□□□□□ -0.84
TRAPPC8-205ENST00000578658 SLC4A3P48751 1232 aa9.81□□□□□ -0.84
TRAPPC8-205ENST00000578658 DAXXQ9UER7 740 aaPredicted RBP9.81□□□□□ -0.84
TRAPPC8-205ENST00000578658 NECTIN2Q92692 538 aa9.79□□□□□ -0.84
TRAPPC8-205ENST00000578658 AK7Q96M32 723 aa9.77□□□□□ -0.85
TRAPPC8-205ENST00000578658 SLC24A3Q9HC58 644 aa9.77□□□□□ -0.85
TRAPPC8-205ENST00000578658 SLC10A3P09131 477 aa9.76□□□□□ -0.85
TRAPPC8-205ENST00000578658 MDM2Q00987 491 aaPredicted RBP9.76□□□□□ -0.85
TRAPPC8-205ENST00000578658 AMHR2Q16671 573 aa9.75□□□□□ -0.85
TRAPPC8-205ENST00000578658 TMUB1Q9BVT8 246 aa9.75□□□□□ -0.85
TRAPPC8-205ENST00000578658 TRIM66O15016 1216 aa9.74□□□□□ -0.85
TRAPPC8-205ENST00000578658 CLCN1P35523 988 aa9.74□□□□□ -0.85
TRAPPC8-205ENST00000578658 APLP1P51693 650 aa9.74□□□□□ -0.85
TRAPPC8-205ENST00000578658 SULF1Q8IWU6 871 aa9.74□□□□□ -0.85
TRAPPC8-205ENST00000578658 DDX11L8A8MPP1 907 aa9.73□□□□□ -0.85
TRAPPC8-205ENST00000578658 GPCPD1Q9NPB8 672 aa9.73□□□□□ -0.85
TRAPPC8-205ENST00000578658 CFHP08603 1231 aa9.72□□□□□ -0.85
TRAPPC8-205ENST00000578658 RSPH4AQ5TD94 716 aa9.72□□□□□ -0.85
TRAPPC8-205ENST00000578658 PRR14Q9BWN1 585 aa9.72□□□□□ -0.85
TRAPPC8-205ENST00000578658 RDH13Q8NBN7 331 aa9.71□□□□□ -0.86
TRAPPC8-205ENST00000578658 REPIN1Q9BWE0 567 aaKnown RBP9.71□□□□□ -0.86
TRAPPC8-205ENST00000578658 KMT5BQ4FZB7 885 aa9.7□□□□□ -0.86
TRAPPC8-205ENST00000578658 FAM217BQ9NTX9 383 aaPredicted RBP9.7□□□□□ -0.86
TRAPPC8-205ENST00000578658 ACTN4O43707 911 aaKnown RBP9.69□□□□□ -0.86
TRAPPC8-205ENST00000578658 ITGBL1O95965 494 aaPredicted RBP9.69□□□□□ -0.86
TRAPPC8-205ENST00000578658 CD46P15529 392 aa9.69□□□□□ -0.86
TRAPPC8-205ENST00000578658 TTLL12Q14166 644 aaPredicted RBP9.69□□□□□ -0.86
TRAPPC8-205ENST00000578658 PLA2G2EQ9NZK7 142 aa9.69□□□□□ -0.86
TRAPPC8-205ENST00000578658 PARP9Q8IXQ6 854 aa9.68□□□□□ -0.86
TRAPPC8-205ENST00000578658 GCGRP47871 477 aa9.67□□□□□ -0.86
TRAPPC8-205ENST00000578658 PDE4DQ08499 809 aa9.67□□□□□ -0.86
TRAPPC8-205ENST00000578658 TPRNQ4KMQ1 711 aa9.67□□□□□ -0.86
TRAPPC8-205ENST00000578658 TJAP1Q5JTD0 557 aa9.67□□□□□ -0.86
TRAPPC8-205ENST00000578658 GIGYF2Q6Y7W6 1299 aaKnown RBP9.66□□□□□ -0.86
TRAPPC8-205ENST00000578658 MTRQ99707 1265 aa9.66□□□□□ -0.86
TRAPPC8-205ENST00000578658 IFFO2Q5TF58 517 aa9.65□□□□□ -0.86
TRAPPC8-205ENST00000578658 PCDHB3Q9Y5E6 796 aa9.65□□□□□ -0.86
TRAPPC8-205ENST00000578658 SSTR3P32745 418 aaPredicted RBP9.64□□□□□ -0.87
TRAPPC8-205ENST00000578658 KCNC4Q03721 635 aa9.63□□□□□ -0.87
TRAPPC8-205ENST00000578658 IL21Q9HBE4 155 aa9.63□□□□□ -0.87
TRAPPC8-205ENST00000578658 COPS2P61201 443 aa9.62□□□□□ -0.87
TRAPPC8-205ENST00000578658 FUT2Q10981 343 aa9.62□□□□□ -0.87
TRAPPC8-205ENST00000578658 BLOC1S3Q6QNY0 202 aa9.62□□□□□ -0.87
TRAPPC8-205ENST00000578658 MS4A1P11836 297 aa9.6□□□□□ -0.87
TRAPPC8-205ENST00000578658 ZNF516Q92618 1163 aa9.6□□□□□ -0.87
TRAPPC8-205ENST00000578658 KDM4AO75164 1064 aa9.59□□□□□ -0.87
TRAPPC8-205ENST00000578658 ATP6V1AP38606 617 aa9.59□□□□□ -0.87
TRAPPC8-205ENST00000578658 PUS10Q3MIT2 529 aaKnown RBP9.59□□□□□ -0.87
TRAPPC8-205ENST00000578658 ZPR1O75312 459 aa9.58□□□□□ -0.88
TRAPPC8-205ENST00000578658 MORN1Q5T089 497 aa9.58□□□□□ -0.88
TRAPPC8-205ENST00000578658 NR1I2O75469 434 aa9.57□□□□□ -0.88
TRAPPC8-205ENST00000578658 USP46P62068 366 aa9.56□□□□□ -0.88
TRAPPC8-205ENST00000578658 SCUBE3Q8IX30 993 aa9.56□□□□□ -0.88
TRAPPC8-205ENST00000578658 BEGAINQ9BUH8 593 aa9.56□□□□□ -0.88
TRAPPC8-205ENST00000578658 PRKCSHP14314 528 aaPredicted RBP9.55□□□□□ -0.88
TRAPPC8-205ENST00000578658 GRIPAP1Q4V328 841 aa9.55□□□□□ -0.88
TRAPPC8-205ENST00000578658 HOXA2O43364 376 aa9.54□□□□□ -0.88
TRAPPC8-205ENST00000578658 NUTM1Q86Y26 1132 aa9.54□□□□□ -0.88
TRAPPC8-205ENST00000578658 NKX2-3Q8TAU0 364 aa9.54□□□□□ -0.88
TRAPPC8-205ENST00000578658 SPIRE2Q8WWL2 714 aa9.54□□□□□ -0.88
TRAPPC8-205ENST00000578658 GPBP1L1Q9HC44 474 aaPredicted RBP9.54□□□□□ -0.88
TRAPPC8-205ENST00000578658 SLC27A5Q9Y2P5 690 aa9.54□□□□□ -0.88
TRAPPC8-205ENST00000578658 A0A0G2JS52 829 aa9.53□□□□□ -0.88
TRAPPC8-205ENST00000578658 TLL1O43897 1013 aa9.53□□□□□ -0.88
TRAPPC8-205ENST00000578658 KDM4CQ9H3R0 1056 aa9.53□□□□□ -0.88
TRAPPC8-205ENST00000578658 HLA-CQ95604 372 aa9.52□□□□□ -0.89
TRAPPC8-205ENST00000578658 THAP11Q96EK4 314 aa9.51□□□□□ -0.89
TRAPPC8-205ENST00000578658 SALL2Q9Y467 1007 aaPredicted RBP9.51□□□□□ -0.89
TRAPPC8-205ENST00000578658 TBC1D2Q9BYX2 928 aa9.5□□□□□ -0.89
TRAPPC8-205ENST00000578658 ADH1BP00325 375 aa9.49□□□□□ -0.89
TRAPPC8-205ENST00000578658 GUCA2AQ02747 115 aa9.48□□□□□ -0.89
TRAPPC8-205ENST00000578658 DIXDC1Q155Q3 683 aa9.48□□□□□ -0.89
TRAPPC8-205ENST00000578658 BRICD5Q6PL45 260 aa9.48□□□□□ -0.89
TRAPPC8-205ENST00000578658 RNF19BQ6ZMZ0 732 aa9.48□□□□□ -0.89
TRAPPC8-205ENST00000578658 SPSB2Q99619 263 aa9.48□□□□□ -0.89
TRAPPC8-205ENST00000578658 MOXD2PA6NHM9 499 aa9.47□□□□□ -0.89
TRAPPC8-205ENST00000578658 FMNL1O95466 1100 aaPredicted RBP9.47□□□□□ -0.89
TRAPPC8-205ENST00000578658 BRPF1P55201 1214 aaPredicted RBP9.47□□□□□ -0.89
TRAPPC8-205ENST00000578658 Q3C1V9 767 aa9.47□□□□□ -0.89
TRAPPC8-205ENST00000578658 PPP1R18Q6NYC8 613 aa9.47□□□□□ -0.89
TRAPPC8-205ENST00000578658 FDX1P10109 184 aa9.46□□□□□ -0.9
TRAPPC8-205ENST00000578658 NDUFV2P19404 249 aa9.46□□□□□ -0.9
TRAPPC8-205ENST00000578658 NEUROD2Q15784 382 aa9.46□□□□□ -0.9
TRAPPC8-205ENST00000578658 FAM117AQ9C073 453 aa9.46□□□□□ -0.9
TRAPPC8-205ENST00000578658 GJA5P36382 358 aa9.45□□□□□ -0.9
TRAPPC8-205ENST00000578658 DDRGK1Q96HY6 314 aa9.45□□□□□ -0.9
TRAPPC8-205ENST00000578658 PCDHGC3Q9UN70 934 aa9.45□□□□□ -0.9
TRAPPC8-205ENST00000578658 S1PR4O95977 384 aa9.44□□□□□ -0.9
TRAPPC8-205ENST00000578658 GGCXP38435 758 aa9.44□□□□□ -0.9
TRAPPC8-205ENST00000578658 MYSM1Q5VVJ2 828 aa9.44□□□□□ -0.9
TRAPPC8-205ENST00000578658 RSBN1LQ6PCB5 846 aaPredicted RBP9.44□□□□□ -0.9
TRAPPC8-205ENST00000578658 FAM160A2Q8N612 972 aaPredicted RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms