RNA–Protein interactions for RNA: ENST00000578412.1

TOP2A-204, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 882 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-204ENST00000578412 TULP1O00294 542 aaPredicted RBP9.07□□□□□ -0.96
TOP2A-204ENST00000578412 OATP04181 439 aa9.07□□□□□ -0.96
TOP2A-204ENST00000578412 TJAP1Q5JTD0 557 aa9.07□□□□□ -0.96
TOP2A-204ENST00000578412 PXYLP1Q8TE99 480 aa9.07□□□□□ -0.96
TOP2A-204ENST00000578412 COPS2P61201 443 aa9.06□□□□□ -0.96
TOP2A-204ENST00000578412 NECTIN2Q92692 538 aa9.06□□□□□ -0.96
TOP2A-204ENST00000578412 METTL3Q86U44 580 aaKnown RBP9.05□□□□□ -0.96
TOP2A-204ENST00000578412 NLRP7Q8WX94 980 aa9.05□□□□□ -0.96
TOP2A-204ENST00000578412 ZNF516Q92618 1163 aa9.05□□□□□ -0.96
TOP2A-204ENST00000578412 IRX2Q9BZI1 471 aaPredicted RBP9.05□□□□□ -0.96
TOP2A-204ENST00000578412 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.04□□□□□ -0.96
TOP2A-204ENST00000578412 IL21Q9HBE4 155 aa9.04□□□□□ -0.96
TOP2A-204ENST00000578412 CFHP08603 1231 aa9.01□□□□□ -0.97
TOP2A-204ENST00000578412 SLC10A3P09131 477 aa9.01□□□□□ -0.97
TOP2A-204ENST00000578412 NKX2-3Q8TAU0 364 aa9.01□□□□□ -0.97
TOP2A-204ENST00000578412 PCDHB3Q9Y5E6 796 aa9.01□□□□□ -0.97
TOP2A-204ENST00000578412 PRR14Q9BWN1 585 aa9□□□□□ -0.97
TOP2A-204ENST00000578412 KMT5BQ4FZB7 885 aa8.99□□□□□ -0.97
TOP2A-204ENST00000578412 BLOC1S3Q6QNY0 202 aa8.98□□□□□ -0.97
TOP2A-204ENST00000578412 PHOX2BQ99453 314 aa8.98□□□□□ -0.97
TOP2A-204ENST00000578412 RDH13Q8NBN7 331 aa8.97□□□□□ -0.97
TOP2A-204ENST00000578412 DDX11L8A8MPP1 907 aa8.96□□□□□ -0.98
TOP2A-204ENST00000578412 ZPR1O75312 459 aa8.96□□□□□ -0.98
TOP2A-204ENST00000578412 RSPH4AQ5TD94 716 aa8.96□□□□□ -0.98
TOP2A-204ENST00000578412 PPP1R18Q6NYC8 613 aa8.96□□□□□ -0.98
TOP2A-204ENST00000578412 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.96□□□□□ -0.98
TOP2A-204ENST00000578412 DAXXQ9UER7 740 aaPredicted RBP8.96□□□□□ -0.98
TOP2A-204ENST00000578412 ACTN4O43707 911 aaKnown RBP8.95□□□□□ -0.98
TOP2A-204ENST00000578412 MAP2K5Q13163 448 aa8.94□□□□□ -0.98
TOP2A-204ENST00000578412 LCE2BO14633 110 aa8.93□□□□□ -0.98
TOP2A-204ENST00000578412 TLL1O43897 1013 aa8.93□□□□□ -0.98
TOP2A-204ENST00000578412 PUS10Q3MIT2 529 aaKnown RBP8.93□□□□□ -0.98
TOP2A-204ENST00000578412 LMOD2Q6P5Q4 547 aa8.93□□□□□ -0.98
TOP2A-204ENST00000578412 IRF6O14896 467 aa8.92□□□□□ -0.98
TOP2A-204ENST00000578412 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.92□□□□□ -0.98
TOP2A-204ENST00000578412 MINK1Q8N4C8 1332 aaPredicted RBP8.9□□□□□ -0.98
TOP2A-204ENST00000578412 NR1I2O75469 434 aa8.89□□□□□ -0.99
TOP2A-204ENST00000578412 GGCXP38435 758 aa8.89□□□□□ -0.99
TOP2A-204ENST00000578412 SULF1Q8IWU6 871 aa8.89□□□□□ -0.99
TOP2A-204ENST00000578412 KRI1Q8N9T8 703 aaKnown RBP8.89□□□□□ -0.99
TOP2A-204ENST00000578412 CCDC102AQ96A19 550 aa8.89□□□□□ -0.99
TOP2A-204ENST00000578412 PRKD2Q9BZL6 878 aa8.89□□□□□ -0.99
TOP2A-204ENST00000578412 MDM2Q00987 491 aaPredicted RBP8.88□□□□□ -0.99
TOP2A-204ENST00000578412 FUT2Q10981 343 aa8.87□□□□□ -0.99
TOP2A-204ENST00000578412 SCUBE3Q8IX30 993 aa8.87□□□□□ -0.99
TOP2A-204ENST00000578412 GCGRP47871 477 aa8.86□□□□□ -0.99
TOP2A-204ENST00000578412 PPEF1O14829 653 aaPredicted RBP8.85□□□□□ -0.99
TOP2A-204ENST00000578412 S1PR4O95977 384 aa8.85□□□□□ -0.99
TOP2A-204ENST00000578412 ABCC9O60706 1549 aa8.85□□□□□ -0.99
TOP2A-204ENST00000578412 RNF223E7ERA6 249 aa8.84□□□□□ -0.99
TOP2A-204ENST00000578412 ADH1BP00325 375 aa8.83□□□□□ -1
TOP2A-204ENST00000578412 ATP6V1AP38606 617 aa8.83□□□□□ -1
TOP2A-204ENST00000578412 MORN1Q5T089 497 aa8.83□□□□□ -1
TOP2A-204ENST00000578412 ZC3H15Q8WU90 426 aaKnown RBP8.83□□□□□ -1
TOP2A-204ENST00000578412 TMUB1Q9BVT8 246 aa8.83□□□□□ -1
TOP2A-204ENST00000578412 Q6ZNB5 142 aa8.82□□□□□ -1
TOP2A-204ENST00000578412 SPSB2Q99619 263 aa8.82□□□□□ -1
TOP2A-204ENST00000578412 CD46P15529 392 aa8.81□□□□□ -1
TOP2A-204ENST00000578412 SLC6A16Q9GZN6 736 aa8.81□□□□□ -1
TOP2A-204ENST00000578412 SLC27A5Q9Y2P5 690 aa8.81□□□□□ -1
TOP2A-204ENST00000578412 ZMYND10O75800 440 aa8.8□□□□□ -1
TOP2A-204ENST00000578412 BARGINQ6ZT62 677 aa8.8□□□□□ -1
TOP2A-204ENST00000578412 GPCPD1Q9NPB8 672 aa8.8□□□□□ -1
TOP2A-204ENST00000578412 V9GY48 417 aaPredicted RBP8.8□□□□□ -1
TOP2A-204ENST00000578412 CLCN1P35523 988 aa8.79□□□□□ -1
TOP2A-204ENST00000578412 GFRA3O60609 400 aa8.78□□□□□ -1
TOP2A-204ENST00000578412 KDM4AO75164 1064 aa8.78□□□□□ -1
TOP2A-204ENST00000578412 SLC19A1P41440 591 aa8.78□□□□□ -1
TOP2A-204ENST00000578412 LAPTM4AQ15012 233 aa8.78□□□□□ -1
TOP2A-204ENST00000578412 GRIPAP1Q4V328 841 aa8.78□□□□□ -1
TOP2A-204ENST00000578412 FMNL1O95466 1100 aaPredicted RBP8.77□□□□□ -1.01
TOP2A-204ENST00000578412 ANKLE1Q8NAG6 615 aa8.77□□□□□ -1.01
TOP2A-204ENST00000578412 REPIN1Q9BWE0 567 aaKnown RBP8.77□□□□□ -1.01
TOP2A-204ENST00000578412 TTLL12Q14166 644 aaPredicted RBP8.76□□□□□ -1.01
TOP2A-204ENST00000578412 RNF19BQ6ZMZ0 732 aa8.76□□□□□ -1.01
TOP2A-204ENST00000578412 HLA-CQ95604 372 aa8.76□□□□□ -1.01
TOP2A-204ENST00000578412 EMID1Q96A84 441 aaPredicted RBP8.76□□□□□ -1.01
TOP2A-204ENST00000578412 THAP11Q96EK4 314 aa8.76□□□□□ -1.01
TOP2A-204ENST00000578412 FAM217BQ9NTX9 383 aaPredicted RBP8.76□□□□□ -1.01
TOP2A-204ENST00000578412 BRICD5Q6PL45 260 aa8.74□□□□□ -1.01
TOP2A-204ENST00000578412 TRAF7Q6Q0C0 670 aa8.74□□□□□ -1.01
TOP2A-204ENST00000578412 LIAT1Q6ZQX7 453 aa8.74□□□□□ -1.01
TOP2A-204ENST00000578412 FAM160A2Q8N612 972 aaPredicted RBP8.74□□□□□ -1.01
TOP2A-204ENST00000578412 PRDM9Q9NQV7 894 aa8.74□□□□□ -1.01
TOP2A-204ENST00000578412 SSTR3P32745 418 aaPredicted RBP8.73□□□□□ -1.01
TOP2A-204ENST00000578412 PLA2G2CQ5R387 149 aa8.73□□□□□ -1.01
TOP2A-204ENST00000578412 NUTM1Q86Y26 1132 aa8.73□□□□□ -1.01
TOP2A-204ENST00000578412 PDZRN3Q9UPQ7 1066 aa8.73□□□□□ -1.01
TOP2A-204ENST00000578412 GUCA2AQ02747 115 aa8.72□□□□□ -1.01
TOP2A-204ENST00000578412 NRG2O14511 850 aaPredicted RBP8.71□□□□□ -1.02
TOP2A-204ENST00000578412 HOXA2O43364 376 aa8.71□□□□□ -1.02
TOP2A-204ENST00000578412 SLC24A1O60721 1099 aa8.71□□□□□ -1.02
TOP2A-204ENST00000578412 Q3C1V9 767 aa8.71□□□□□ -1.02
TOP2A-204ENST00000578412 SPRYD7Q5W111 196 aa8.71□□□□□ -1.02
TOP2A-204ENST00000578412 FCF1Q9Y324 198 aaKnown RBP8.71□□□□□ -1.02
TOP2A-204ENST00000578412 SALL2Q9Y467 1007 aaPredicted RBP8.71□□□□□ -1.02
TOP2A-204ENST00000578412 USP46P62068 366 aa8.7□□□□□ -1.02
TOP2A-204ENST00000578412 ZNF697Q5TEC3 545 aa8.69□□□□□ -1.02
TOP2A-204ENST00000578412 GIGYF2Q6Y7W6 1299 aaKnown RBP8.69□□□□□ -1.02
TOP2A-204ENST00000578412 TRIM66O15016 1216 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms