RNA–Protein interactions for RNA: ENST00000578315.1

UPF3AP2-202, Transcript of UPF3A pseudogene 2, humanhuman

TSL 5 BASIC

Gene UPF3AP2, Length 730 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-202ENST00000578315 MSH6P52701 1360 aa21.21■□□□□ 0.99
UPF3AP2-202ENST00000578315 NKTRP30414 1462 aaKnown RBP21.2■□□□□ 0.98
UPF3AP2-202ENST00000578315 FAM50AQ14320 339 aaKnown RBP21.2■□□□□ 0.98
UPF3AP2-202ENST00000578315 SLAIN2Q9P270 581 aa21.19■□□□□ 0.98
UPF3AP2-202ENST00000578315 PPP1R15AO75807 674 aaPredicted RBP21.18■□□□□ 0.98
UPF3AP2-202ENST00000578315 MYO5BQ9ULV0 1848 aa21.18■□□□□ 0.98
UPF3AP2-202ENST00000578315 PHLPP1O60346 1717 aa21.16■□□□□ 0.98
UPF3AP2-202ENST00000578315 ADGRL2O95490 1459 aa21.16■□□□□ 0.98
UPF3AP2-202ENST00000578315 ZFYVE9O95405 1425 aa21.15■□□□□ 0.98
UPF3AP2-202ENST00000578315 ANKRD50Q9ULJ7 1429 aa21.15■□□□□ 0.98
UPF3AP2-202ENST00000578315 RIMS2Q9UQ26 1411 aa21.15■□□□□ 0.98
UPF3AP2-202ENST00000578315 CHGAP10645 457 aaKnown RBP21.15■□□□□ 0.98
UPF3AP2-202ENST00000578315 GCC2Q8IWJ2 1684 aa21.15■□□□□ 0.98
UPF3AP2-202ENST00000578315 PLEKHG1Q9ULL1 1385 aa21.14■□□□□ 0.98
UPF3AP2-202ENST00000578315 NUTM2DQ5VT03 806 aaPredicted RBP21.14■□□□□ 0.97
UPF3AP2-202ENST00000578315 RPRD2Q5VT52 1461 aaKnown RBP21.13■□□□□ 0.97
UPF3AP2-202ENST00000578315 CHD2O14647 1828 aaKnown RBP21.13■□□□□ 0.97
UPF3AP2-202ENST00000578315 C14orf37Q86TY3 774 aa21.12■□□□□ 0.97
UPF3AP2-202ENST00000578315 TMEM131LA2VDJ0 1609 aa21.11■□□□□ 0.97
UPF3AP2-202ENST00000578315 JCADQ9P266 1359 aa21.11■□□□□ 0.97
UPF3AP2-202ENST00000578315 HDGFP51858 240 aaKnown RBP21.11■□□□□ 0.97
UPF3AP2-202ENST00000578315 SETD1AO15047 1707 aaKnown RBP21.11■□□□□ 0.97
UPF3AP2-202ENST00000578315 TBX22Q9Y458 520 aa21.08■□□□□ 0.97
UPF3AP2-202ENST00000578315 COL16A1Q07092 1604 aaPredicted RBP21.07■□□□□ 0.96
UPF3AP2-202ENST00000578315 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.06■□□□□ 0.96
UPF3AP2-202ENST00000578315 MEX3CQ5U5Q3 659 aaKnown RBP21.04■□□□□ 0.96
UPF3AP2-202ENST00000578315 LRP6O75581 1613 aa21.04■□□□□ 0.96
UPF3AP2-202ENST00000578315 ADAMTS13Q76LX8 1427 aa21.04■□□□□ 0.96
UPF3AP2-202ENST00000578315 E9PCH4 1651 aa21.03■□□□□ 0.96
UPF3AP2-202ENST00000578315 UNC13BO14795 1591 aa21.03■□□□□ 0.96
UPF3AP2-202ENST00000578315 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.02■□□□□ 0.96
UPF3AP2-202ENST00000578315 ATF3P18847 181 aa21.02■□□□□ 0.96
UPF3AP2-202ENST00000578315 CADPS2Q86UW7 1296 aa21.01■□□□□ 0.95
UPF3AP2-202ENST00000578315 C19orf44Q9H6X5 657 aa21.01■□□□□ 0.95
UPF3AP2-202ENST00000578315 NCOA3Q9Y6Q9 1424 aa21.01■□□□□ 0.95
UPF3AP2-202ENST00000578315 SPATA31A6Q5VVP1 1343 aa21■□□□□ 0.95
UPF3AP2-202ENST00000578315 TRIM52Q96A61 297 aa20.99■□□□□ 0.95
UPF3AP2-202ENST00000578315 AMOTL2Q9Y2J4 779 aa20.98■□□□□ 0.95
UPF3AP2-202ENST00000578315 DIP2AQ14689 1571 aa20.97■□□□□ 0.95
UPF3AP2-202ENST00000578315 AHDC1Q5TGY3 1603 aaPredicted RBP20.96■□□□□ 0.95
UPF3AP2-202ENST00000578315 PTPRUQ92729 1446 aa20.96■□□□□ 0.95
UPF3AP2-202ENST00000578315 NUTM2BA6NNL0 878 aaPredicted RBP20.96■□□□□ 0.95
UPF3AP2-202ENST00000578315 NUTM2EB1AL46 878 aaPredicted RBP20.96■□□□□ 0.95
UPF3AP2-202ENST00000578315 ZNF772Q68DY9 489 aaPredicted RBP20.96■□□□□ 0.95
UPF3AP2-202ENST00000578315 NUTM2AQ8IVF1 878 aaPredicted RBP20.96■□□□□ 0.95
UPF3AP2-202ENST00000578315 PIK3R4Q99570 1358 aa20.96■□□□□ 0.95
UPF3AP2-202ENST00000578315 TRPM2O94759 1503 aa20.95■□□□□ 0.94
UPF3AP2-202ENST00000578315 ITGAEP38570 1179 aa20.95■□□□□ 0.94
UPF3AP2-202ENST00000578315 BRINP3Q76B58 766 aa20.95■□□□□ 0.94
UPF3AP2-202ENST00000578315 IQGAP3Q86VI3 1631 aa20.95■□□□□ 0.94
UPF3AP2-202ENST00000578315 NUP155O75694 1391 aa20.95■□□□□ 0.94
UPF3AP2-202ENST00000578315 SHPRHQ149N8 1683 aa20.94■□□□□ 0.94
UPF3AP2-202ENST00000578315 UPF1Q92900 1129 aaKnown RBP eCLIP20.92■□□□□ 0.94
UPF3AP2-202ENST00000578315 ROCK1Q13464 1354 aa20.91■□□□□ 0.94
UPF3AP2-202ENST00000578315 RXRBP28702 533 aa20.89■□□□□ 0.93
UPF3AP2-202ENST00000578315 ZNF326Q5BKZ1 582 aaKnown RBP20.89■□□□□ 0.93
UPF3AP2-202ENST00000578315 NRXN3Q9Y4C0 1643 aa20.87■□□□□ 0.93
UPF3AP2-202ENST00000578315 ASXL1Q8IXJ9 1541 aa20.87■□□□□ 0.93
UPF3AP2-202ENST00000578315 AFF2P51816 1311 aa20.85■□□□□ 0.93
UPF3AP2-202ENST00000578315 XRN1Q8IZH2 1706 aaKnown RBP20.85■□□□□ 0.93
UPF3AP2-202ENST00000578315 PPARGC1BQ86YN6 1023 aaKnown RBP20.85■□□□□ 0.93
UPF3AP2-202ENST00000578315 DDX17Q92841 729 aaKnown RBP20.85■□□□□ 0.93
UPF3AP2-202ENST00000578315 MST1RQ04912 1400 aa20.85■□□□□ 0.93
UPF3AP2-202ENST00000578315 METP08581 1390 aa20.85■□□□□ 0.93
UPF3AP2-202ENST00000578315 DCCP43146 1447 aa20.84■□□□□ 0.93
UPF3AP2-202ENST00000578315 SETBP1Q9Y6X0 1596 aa20.83■□□□□ 0.92
UPF3AP2-202ENST00000578315 SPHKAPQ2M3C7 1700 aa20.82■□□□□ 0.92
UPF3AP2-202ENST00000578315 NHSL1Q5SYE7 1610 aa20.82■□□□□ 0.92
UPF3AP2-202ENST00000578315 SETD5Q9C0A6 1442 aa20.81■□□□□ 0.92
UPF3AP2-202ENST00000578315 LRRC59Q96AG4 307 aaKnown RBP20.8■□□□□ 0.92
UPF3AP2-202ENST00000578315 C8orf37Q96NL8 207 aa20.8■□□□□ 0.92
UPF3AP2-202ENST00000578315 ADGRL3Q9HAR2 1447 aa20.77■□□□□ 0.91
UPF3AP2-202ENST00000578315 CDK12Q9NYV4 1490 aaPredicted RBP20.76■□□□□ 0.91
UPF3AP2-202ENST00000578315 NALCNQ8IZF0 1738 aa20.76■□□□□ 0.91
UPF3AP2-202ENST00000578315 QTRT2Q9H974 415 aaKnown RBP20.76■□□□□ 0.91
UPF3AP2-202ENST00000578315 PNPLA6Q8IY17 1366 aa20.75■□□□□ 0.91
UPF3AP2-202ENST00000578315 CLTCL1P53675 1640 aa20.75■□□□□ 0.91
UPF3AP2-202ENST00000578315 NEXMIFQ5QGS0 1516 aa20.74■□□□□ 0.91
UPF3AP2-202ENST00000578315 ADAMTS2O95450 1211 aa20.74■□□□□ 0.91
UPF3AP2-202ENST00000578315 RGS12O14924 1447 aa20.73■□□□□ 0.91
UPF3AP2-202ENST00000578315 RBM6P78332 1123 aaKnown RBP20.72■□□□□ 0.91
UPF3AP2-202ENST00000578315 NGLY1Q96IV0 654 aa20.72■□□□□ 0.91
UPF3AP2-202ENST00000578315 C1orf167Q5SNV9 1468 aa20.7■□□□□ 0.9
UPF3AP2-202ENST00000578315 ORAI2Q96SN7 254 aa20.69■□□□□ 0.9
UPF3AP2-202ENST00000578315 KIF1BO60333 1816 aa20.68■□□□□ 0.9
UPF3AP2-202ENST00000578315 ROBO2Q9HCK4 1378 aa20.67■□□□□ 0.9
UPF3AP2-202ENST00000578315 VGFO15240 615 aaPredicted RBP20.64■□□□□ 0.89
UPF3AP2-202ENST00000578315 USP21Q9UK80 565 aa20.64■□□□□ 0.89
UPF3AP2-202ENST00000578315 PTCH1Q13635 1447 aa20.63■□□□□ 0.89
UPF3AP2-202ENST00000578315 SOS2Q07890 1332 aaPredicted RBP20.63■□□□□ 0.89
UPF3AP2-202ENST00000578315 LAMC1P11047 1609 aa20.61■□□□□ 0.89
UPF3AP2-202ENST00000578315 NAIPQ13075 1403 aa20.61■□□□□ 0.89
UPF3AP2-202ENST00000578315 TRPC5Q9UL62 973 aaPredicted RBP20.58■□□□□ 0.89
UPF3AP2-202ENST00000578315 ATAD2Q6PL18 1390 aa20.58■□□□□ 0.88
UPF3AP2-202ENST00000578315 ESCO1Q5FWF5 840 aa20.57■□□□□ 0.88
UPF3AP2-202ENST00000578315 XPCQ01831 940 aaPredicted RBP20.56■□□□□ 0.88
UPF3AP2-202ENST00000578315 FNBP4Q8N3X1 1017 aaPredicted RBP20.56■□□□□ 0.88
UPF3AP2-202ENST00000578315 RPGRIP1LQ68CZ1 1315 aa20.55■□□□□ 0.88
UPF3AP2-202ENST00000578315 HFM1A2PYH4 1435 aa20.55■□□□□ 0.88
UPF3AP2-202ENST00000578315 SLC4A1APQ9BWU0 796 aaKnown RBP20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms