RNA–Protein interactions for RNA: ENST00000578218.5

THRA-208, Transcript of thyroid hormone receptor alpha, humanhuman

TSL 4

Gene THRA, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THRA-208ENST00000578218 E9PCH4 1651 aa38.45■■■■□ 3.75
THRA-208ENST00000578218 TMEM131LA2VDJ0 1609 aa38.44■■■■□ 3.74
THRA-208ENST00000578218 IQGAP3Q86VI3 1631 aa38.44■■■■□ 3.74
THRA-208ENST00000578218 BCANQ96GW7 911 aa38.43■■■■□ 3.74
THRA-208ENST00000578218 KCNA6P17658 529 aa38.42■■■■□ 3.74
THRA-208ENST00000578218 ZFYVE9O95405 1425 aa38.41■■■■□ 3.74
THRA-208ENST00000578218 ROCK1Q13464 1354 aa38.41■■■■□ 3.74
THRA-208ENST00000578218 RIMS2Q9UQ26 1411 aa38.38■■■■□ 3.73
THRA-208ENST00000578218 PPP1R15AO75807 674 aaPredicted RBP38.37■■■■□ 3.73
THRA-208ENST00000578218 ROBO1Q9Y6N7 1651 aa38.36■■■■□ 3.73
THRA-208ENST00000578218 PLEKHG1Q9ULL1 1385 aa38.35■■■■□ 3.73
THRA-208ENST00000578218 PROSER2Q86WR7 435 aaPredicted RBP38.35■■■■□ 3.73
THRA-208ENST00000578218 FAM135BQ49AJ0 1406 aa38.32■■■■□ 3.73
THRA-208ENST00000578218 CHD2O14647 1828 aaKnown RBP38.32■■■■□ 3.72
THRA-208ENST00000578218 RBM33Q96EV2 1170 aaKnown RBP38.3■■■■□ 3.72
THRA-208ENST00000578218 CHGAP10645 457 aaKnown RBP38.29■■■■□ 3.72
THRA-208ENST00000578218 HDGFP51858 240 aaKnown RBP38.28■■■■□ 3.72
THRA-208ENST00000578218 ITGAEP38570 1179 aa38.27■■■■□ 3.72
THRA-208ENST00000578218 MSH6P52701 1360 aa38.27■■■■□ 3.72
THRA-208ENST00000578218 DIP2AQ14689 1571 aa38.24■■■■□ 3.71
THRA-208ENST00000578218 NUP155O75694 1391 aa38.22■■■■□ 3.71
THRA-208ENST00000578218 ABCF1Q8NE71 845 aaKnown RBP eCLIP38.21■■■■□ 3.71
THRA-208ENST00000578218 SPHKAPQ2M3C7 1700 aa38.19■■■■□ 3.7
THRA-208ENST00000578218 PPARGC1BQ86YN6 1023 aaKnown RBP38.18■■■■□ 3.7
THRA-208ENST00000578218 PHLPP1O60346 1717 aa38.16■■■■□ 3.7
THRA-208ENST00000578218 NUTM2DQ5VT03 806 aaPredicted RBP38.14■■■■□ 3.7
THRA-208ENST00000578218 ADAMTS13Q76LX8 1427 aa38.13■■■■□ 3.7
THRA-208ENST00000578218 TRPM2O94759 1503 aa38.12■■■■□ 3.69
THRA-208ENST00000578218 TBX22Q9Y458 520 aa38.11■■■■□ 3.69
THRA-208ENST00000578218 C14orf37Q86TY3 774 aa38.06■■■■□ 3.68
THRA-208ENST00000578218 PIK3R4Q99570 1358 aa38.06■■■■□ 3.68
THRA-208ENST00000578218 NCOA3Q9Y6Q9 1424 aa38.05■■■■□ 3.68
THRA-208ENST00000578218 SLAIN2Q9P270 581 aa38.04■■■■□ 3.68
THRA-208ENST00000578218 SIPA1L2Q9P2F8 1722 aaPredicted RBP38.04■■■■□ 3.68
THRA-208ENST00000578218 RGS17Q9UGC6 210 aaPredicted RBP38■■■■□ 3.67
THRA-208ENST00000578218 COL16A1Q07092 1604 aaPredicted RBP37.99■■■■□ 3.67
THRA-208ENST00000578218 NRXN3Q9Y4C0 1643 aa37.99■■■■□ 3.67
THRA-208ENST00000578218 SETBP1Q9Y6X0 1596 aa37.97■■■■□ 3.67
THRA-208ENST00000578218 CLTCL1P53675 1640 aa37.96■■■■□ 3.67
THRA-208ENST00000578218 RRBP1Q9P2E9 1410 aaKnown RBP37.95■■■■□ 3.67
THRA-208ENST00000578218 XRN1Q8IZH2 1706 aaKnown RBP37.95■■■■□ 3.67
THRA-208ENST00000578218 JCADQ9P266 1359 aa37.93■■■■□ 3.66
THRA-208ENST00000578218 ZNF326Q5BKZ1 582 aaKnown RBP37.92■■■■□ 3.66
THRA-208ENST00000578218 PTPRUQ92729 1446 aa37.92■■■■□ 3.66
THRA-208ENST00000578218 KIF1BO60333 1816 aa37.9■■■■□ 3.66
THRA-208ENST00000578218 CADPS2Q86UW7 1296 aa37.9■■■■□ 3.66
THRA-208ENST00000578218 AHDC1Q5TGY3 1603 aaPredicted RBP37.9■■■■□ 3.66
THRA-208ENST00000578218 ATF3P18847 181 aa37.89■■■■□ 3.66
THRA-208ENST00000578218 AMOTL2Q9Y2J4 779 aa37.89■■■■□ 3.66
THRA-208ENST00000578218 C19orf44Q9H6X5 657 aa37.87■■■■□ 3.65
THRA-208ENST00000578218 NAIPQ13075 1403 aa37.87■■■■□ 3.65
THRA-208ENST00000578218 NEXMIFQ5QGS0 1516 aa37.86■■■■□ 3.65
THRA-208ENST00000578218 SHPRHQ149N8 1683 aa37.82■■■■□ 3.65
THRA-208ENST00000578218 DCCP43146 1447 aa37.82■■■■□ 3.64
THRA-208ENST00000578218 POTEAQ6S8J7 498 aa37.81■■■■□ 3.64
THRA-208ENST00000578218 METP08581 1390 aa37.75■■■■□ 3.63
THRA-208ENST00000578218 LRP6O75581 1613 aa37.75■■■■□ 3.63
THRA-208ENST00000578218 SETD1AO15047 1707 aaKnown RBP37.74■■■■□ 3.63
THRA-208ENST00000578218 NALCNQ8IZF0 1738 aa37.73■■■■□ 3.63
THRA-208ENST00000578218 ASXL1Q8IXJ9 1541 aa37.73■■■■□ 3.63
THRA-208ENST00000578218 SPATA31A6Q5VVP1 1343 aa37.73■■■■□ 3.63
THRA-208ENST00000578218 HFM1A2PYH4 1435 aa37.72■■■■□ 3.63
THRA-208ENST00000578218 NHSL1Q5SYE7 1610 aa37.7■■■■□ 3.63
THRA-208ENST00000578218 MEX3CQ5U5Q3 659 aaKnown RBP37.69■■■■□ 3.62
THRA-208ENST00000578218 BRINP3Q76B58 766 aa37.69■■■■□ 3.62
THRA-208ENST00000578218 TRIM52Q96A61 297 aa37.69■■■■□ 3.62
THRA-208ENST00000578218 MST1RQ04912 1400 aa37.69■■■■□ 3.62
THRA-208ENST00000578218 ADGRL3Q9HAR2 1447 aa37.68■■■■□ 3.62
THRA-208ENST00000578218 PPLO60437 1756 aa37.61■■■■□ 3.61
THRA-208ENST00000578218 SLC4A1APQ9BWU0 796 aaKnown RBP37.58■■■■□ 3.61
THRA-208ENST00000578218 PTCH1Q13635 1447 aa37.57■■■■□ 3.6
THRA-208ENST00000578218 SETD5Q9C0A6 1442 aa37.54■■■■□ 3.6
THRA-208ENST00000578218 VGFO15240 615 aaPredicted RBP37.54■■■■□ 3.6
THRA-208ENST00000578218 ZNF772Q68DY9 489 aaPredicted RBP37.52■■■■□ 3.6
THRA-208ENST00000578218 NUTM2BA6NNL0 878 aaPredicted RBP37.5■■■■□ 3.59
THRA-208ENST00000578218 NUTM2EB1AL46 878 aaPredicted RBP37.5■■■■□ 3.59
THRA-208ENST00000578218 NUTM2AQ8IVF1 878 aaPredicted RBP37.5■■■■□ 3.59
THRA-208ENST00000578218 RPGRIP1LQ68CZ1 1315 aa37.48■■■■□ 3.59
THRA-208ENST00000578218 C1orf167Q5SNV9 1468 aa37.45■■■■□ 3.59
THRA-208ENST00000578218 PRAG1Q86YV5 1406 aa37.45■■■■□ 3.59
THRA-208ENST00000578218 ROBO2Q9HCK4 1378 aa37.45■■■■□ 3.59
THRA-208ENST00000578218 LRRC59Q96AG4 307 aaKnown RBP37.42■■■■□ 3.58
THRA-208ENST00000578218 LAMC1P11047 1609 aa37.41■■■■□ 3.58
THRA-208ENST00000578218 DDX17Q92841 729 aaKnown RBP37.41■■■■□ 3.58
THRA-208ENST00000578218 CCDC144AA2RUR9 1427 aa37.4■■■■□ 3.58
THRA-208ENST00000578218 PNPLA6Q8IY17 1366 aa37.4■■■■□ 3.58
THRA-208ENST00000578218 IFT172Q9UG01 1749 aa37.39■■■■□ 3.58
THRA-208ENST00000578218 FOXD1Q16676 465 aa37.38■■■■□ 3.57
THRA-208ENST00000578218 AFF2P51816 1311 aa37.36■■■■□ 3.57
THRA-208ENST00000578218 CDC42BPGQ6DT37 1551 aa37.34■■■■□ 3.57
THRA-208ENST00000578218 RXRBP28702 533 aa37.31■■■■□ 3.56
THRA-208ENST00000578218 CDK12Q9NYV4 1490 aaPredicted RBP37.29■■■■□ 3.56
THRA-208ENST00000578218 C8orf37Q96NL8 207 aa37.29■■■■□ 3.56
THRA-208ENST00000578218 KNDC1Q76NI1 1749 aa37.27■■■■□ 3.56
THRA-208ENST00000578218 SPATA31E1Q6ZUB1 1445 aa37.27■■■■□ 3.56
THRA-208ENST00000578218 ORAI2Q96SN7 254 aa37.26■■■■□ 3.56
THRA-208ENST00000578218 ADGRF5Q8IZF2 1346 aa37.25■■■■□ 3.55
THRA-208ENST00000578218 RGL3Q3MIN7 710 aa37.24■■■■□ 3.55
THRA-208ENST00000578218 ANKRD30BQ9BXX2 1392 aa37.24■■■■□ 3.55
THRA-208ENST00000578218 SOS2Q07890 1332 aaPredicted RBP37.22■■■■□ 3.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms