RNA–Protein interactions for RNA: ENST00000578122.5

IFT20-206, Transcript of intraflagellar transport 20, humanhuman

TSL 2 BASIC

Gene IFT20, Length 834 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-206ENST00000578122 POLR1AO95602 1720 aaPredicted RBP22.72■■□□□ 1.23
IFT20-206ENST00000578122 CHGAP10645 457 aaKnown RBP22.72■■□□□ 1.23
IFT20-206ENST00000578122 ANKLE2Q86XL3 938 aa22.71■■□□□ 1.23
IFT20-206ENST00000578122 SLIT1O75093 1534 aa22.69■■□□□ 1.22
IFT20-206ENST00000578122 ARHGAP23Q9P227 1491 aa22.69■■□□□ 1.22
IFT20-206ENST00000578122 KIF1BO60333 1816 aa22.68■■□□□ 1.22
IFT20-206ENST00000578122 TMEM2Q9UHN6 1383 aa22.68■■□□□ 1.22
IFT20-206ENST00000578122 TXNDC2Q86VQ3 553 aa22.65■■□□□ 1.22
IFT20-206ENST00000578122 EID1Q9Y6B2 187 aa22.65■■□□□ 1.22
IFT20-206ENST00000578122 NEURL4Q96JN8 1562 aa22.64■■□□□ 1.22
IFT20-206ENST00000578122 SCAF11Q99590 1463 aaKnown RBP22.64■■□□□ 1.21
IFT20-206ENST00000578122 CCDC144AA2RUR9 1427 aa22.64■■□□□ 1.21
IFT20-206ENST00000578122 LTKP29376 864 aa22.63■■□□□ 1.21
IFT20-206ENST00000578122 PCGF6Q9BYE7 350 aa22.61■■□□□ 1.21
IFT20-206ENST00000578122 RIMS2Q9UQ26 1411 aa22.61■■□□□ 1.21
IFT20-206ENST00000578122 MED14O60244 1454 aa22.6■■□□□ 1.21
IFT20-206ENST00000578122 NPHP4O75161 1426 aaPredicted RBP22.6■■□□□ 1.21
IFT20-206ENST00000578122 KCNA4P22459 653 aa22.6■■□□□ 1.21
IFT20-206ENST00000578122 HDGFP51858 240 aaKnown RBP22.6■■□□□ 1.21
IFT20-206ENST00000578122 ANKRD30BQ9BXX2 1392 aa22.6■■□□□ 1.21
IFT20-206ENST00000578122 ZFYVE9O95405 1425 aa22.59■■□□□ 1.21
IFT20-206ENST00000578122 ZNF326Q5BKZ1 582 aaKnown RBP22.59■■□□□ 1.21
IFT20-206ENST00000578122 IQGAP1P46940 1657 aa22.58■■□□□ 1.21
IFT20-206ENST00000578122 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.57■■□□□ 1.2
IFT20-206ENST00000578122 PPP1R15AO75807 674 aaPredicted RBP22.56■■□□□ 1.2
IFT20-206ENST00000578122 C1QBPQ07021 282 aaKnown RBP22.54■■□□□ 1.2
IFT20-206ENST00000578122 NUTM2DQ5VT03 806 aaPredicted RBP22.53■■□□□ 1.2
IFT20-206ENST00000578122 SPATA31E1Q6ZUB1 1445 aa22.52■■□□□ 1.2
IFT20-206ENST00000578122 NEXMIFQ5QGS0 1516 aa22.52■■□□□ 1.19
IFT20-206ENST00000578122 RPGRIP1LQ68CZ1 1315 aa22.51■■□□□ 1.19
IFT20-206ENST00000578122 DHX57Q6P158 1386 aaKnown RBP22.5■■□□□ 1.19
IFT20-206ENST00000578122 PLEKHG1Q9ULL1 1385 aa22.5■■□□□ 1.19
IFT20-206ENST00000578122 RGL3Q3MIN7 710 aa22.5■■□□□ 1.19
IFT20-206ENST00000578122 BCANQ96GW7 911 aa22.5■■□□□ 1.19
IFT20-206ENST00000578122 PPLO60437 1756 aa22.49■■□□□ 1.19
IFT20-206ENST00000578122 VGFO15240 615 aaPredicted RBP22.45■■□□□ 1.18
IFT20-206ENST00000578122 SLC26A8Q96RN1 970 aa22.45■■□□□ 1.18
IFT20-206ENST00000578122 ZNF335Q9H4Z2 1342 aaPredicted RBP22.45■■□□□ 1.18
IFT20-206ENST00000578122 IFT172Q9UG01 1749 aa22.44■■□□□ 1.18
IFT20-206ENST00000578122 LTBP4Q8N2S1 1624 aa22.41■■□□□ 1.18
IFT20-206ENST00000578122 TBX22Q9Y458 520 aa22.4■■□□□ 1.18
IFT20-206ENST00000578122 SETBP1Q9Y6X0 1596 aa22.4■■□□□ 1.18
IFT20-206ENST00000578122 ADAMTS13Q76LX8 1427 aa22.4■■□□□ 1.18
IFT20-206ENST00000578122 NRXN3Q9Y4C0 1643 aa22.39■■□□□ 1.18
IFT20-206ENST00000578122 DIP2AQ14689 1571 aa22.39■■□□□ 1.18
IFT20-206ENST00000578122 STRCP1A6NGW2 1772 aa22.38■■□□□ 1.17
IFT20-206ENST00000578122 ADGRF5Q8IZF2 1346 aa22.36■■□□□ 1.17
IFT20-206ENST00000578122 SIN3AQ96ST3 1273 aa22.36■■□□□ 1.17
IFT20-206ENST00000578122 CHD2O14647 1828 aaKnown RBP22.35■■□□□ 1.17
IFT20-206ENST00000578122 CERKQ8TCT0 537 aa22.34■■□□□ 1.17
IFT20-206ENST00000578122 CPS1P31327 1500 aa22.34■■□□□ 1.17
IFT20-206ENST00000578122 KCNA6P17658 529 aa22.33■■□□□ 1.17
IFT20-206ENST00000578122 NEUROD1Q13562 356 aa22.33■■□□□ 1.17
IFT20-206ENST00000578122 MYOM2P54296 1465 aa22.33■■□□□ 1.16
IFT20-206ENST00000578122 DCAF11Q8TEB1 546 aa22.32■■□□□ 1.16
IFT20-206ENST00000578122 KDM2AQ9Y2K7 1162 aa22.32■■□□□ 1.16
IFT20-206ENST00000578122 ALKQ9UM73 1620 aa22.31■■□□□ 1.16
IFT20-206ENST00000578122 PIK3R4Q99570 1358 aa22.31■■□□□ 1.16
IFT20-206ENST00000578122 SETD1AO15047 1707 aaKnown RBP22.3■■□□□ 1.16
IFT20-206ENST00000578122 NWD1Q149M9 1564 aa22.29■■□□□ 1.16
IFT20-206ENST00000578122 STAC3Q96MF2 364 aa22.29■■□□□ 1.16
IFT20-206ENST00000578122 NRXN1Q9ULB1 1477 aa22.28■■□□□ 1.16
IFT20-206ENST00000578122 METP08581 1390 aa22.28■■□□□ 1.16
IFT20-206ENST00000578122 PIK3C2GO75747 1445 aa22.28■■□□□ 1.16
IFT20-206ENST00000578122 LRRC7Q96NW7 1537 aa22.26■■□□□ 1.15
IFT20-206ENST00000578122 PTPRUQ92729 1446 aa22.25■■□□□ 1.15
IFT20-206ENST00000578122 AMOTL2Q9Y2J4 779 aa22.25■■□□□ 1.15
IFT20-206ENST00000578122 NKTRP30414 1462 aaKnown RBP22.25■■□□□ 1.15
IFT20-206ENST00000578122 IQSEC2Q5JU85 1478 aa22.24■■□□□ 1.15
IFT20-206ENST00000578122 PROSER2Q86WR7 435 aaPredicted RBP22.24■■□□□ 1.15
IFT20-206ENST00000578122 L3MBTL2Q969R5 705 aa22.24■■□□□ 1.15
IFT20-206ENST00000578122 C14orf93Q9H972 538 aaKnown RBP22.23■■□□□ 1.15
IFT20-206ENST00000578122 XRN1Q8IZH2 1706 aaKnown RBP22.23■■□□□ 1.15
IFT20-206ENST00000578122 LAMC1P11047 1609 aa22.22■■□□□ 1.15
IFT20-206ENST00000578122 XIRP1Q702N8 1843 aaKnown RBP22.22■■□□□ 1.15
IFT20-206ENST00000578122 CFAP70Q5T0N1 1121 aa22.21■■□□□ 1.15
IFT20-206ENST00000578122 CCER1Q8TC90 406 aaPredicted RBP22.2■■□□□ 1.14
IFT20-206ENST00000578122 CLSPNQ9HAW4 1339 aa22.19■■□□□ 1.14
IFT20-206ENST00000578122 ASXL1Q8IXJ9 1541 aa22.18■■□□□ 1.14
IFT20-206ENST00000578122 TMEM94Q12767 1356 aa22.18■■□□□ 1.14
IFT20-206ENST00000578122 TMEM132EQ6IEE7 984 aa22.18■■□□□ 1.14
IFT20-206ENST00000578122 TONSLQ96HA7 1378 aa22.17■■□□□ 1.14
IFT20-206ENST00000578122 RBM33Q96EV2 1170 aaKnown RBP22.17■■□□□ 1.14
IFT20-206ENST00000578122 PRAG1Q86YV5 1406 aa22.15■■□□□ 1.14
IFT20-206ENST00000578122 LRPPRCP42704 1394 aaKnown RBP22.14■■□□□ 1.14
IFT20-206ENST00000578122 STK26Q9P289 416 aa22.14■■□□□ 1.13
IFT20-206ENST00000578122 KIAA1210Q9ULL0 1709 aa22.13■■□□□ 1.13
IFT20-206ENST00000578122 YTHDC2Q9H6S0 1430 aaKnown RBP22.13■■□□□ 1.13
IFT20-206ENST00000578122 PTCH1Q13635 1447 aa22.12■■□□□ 1.13
IFT20-206ENST00000578122 NCOA3Q9Y6Q9 1424 aa22.12■■□□□ 1.13
IFT20-206ENST00000578122 KNDC1Q76NI1 1749 aa22.11■■□□□ 1.13
IFT20-206ENST00000578122 FBXO41Q8TF61 875 aa22.11■■□□□ 1.13
IFT20-206ENST00000578122 ABCC11Q96J66 1382 aa22.11■■□□□ 1.13
IFT20-206ENST00000578122 ROBO2Q9HCK4 1378 aa22.11■■□□□ 1.13
IFT20-206ENST00000578122 UBAP1LF5GYI3 381 aa22.1■■□□□ 1.13
IFT20-206ENST00000578122 ADGRB1O14514 1584 aa22.1■■□□□ 1.13
IFT20-206ENST00000578122 C14orf37Q86TY3 774 aa22.1■■□□□ 1.13
IFT20-206ENST00000578122 TECPR2O15040 1411 aa22.09■■□□□ 1.13
IFT20-206ENST00000578122 MSH6P52701 1360 aa22.08■■□□□ 1.12
IFT20-206ENST00000578122 TOM1O60784 492 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 128.1 ms