RNA–Protein interactions for RNA: ENST00000575709.5

USP6-206, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 2

Gene USP6, Length 8,185 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-206ENST00000575709 NPM1P06748 294 aaKnown RBP eCLIP12.75□□□□□ -0.37
USP6-206ENST00000575709 RBM33Q96EV2 1170 aaKnown RBP12.75□□□□□ -0.37
USP6-206ENST00000575709 NAT10Q9H0A0 1025 aaKnown RBP12.75□□□□□ -0.37
USP6-206ENST00000575709 DDX11Q96FC9 970 aa12.74□□□□□ -0.37
USP6-206ENST00000575709 TRIM34Q9BYJ4 488 aa12.74□□□□□ -0.37
USP6-206ENST00000575709 SMC4Q9NTJ3 1288 aa12.74□□□□□ -0.37
USP6-206ENST00000575709 OFD1O75665 1012 aa12.74□□□□□ -0.37
USP6-206ENST00000575709 LRRCC1Q9C099 1032 aa12.74□□□□□ -0.37
USP6-206ENST00000575709 POGKQ9P215 609 aa12.74□□□□□ -0.37
USP6-206ENST00000575709 SPC24Q8NBT2 197 aa12.74□□□□□ -0.37
USP6-206ENST00000575709 FOSBP53539 338 aa12.73□□□□□ -0.37
USP6-206ENST00000575709 ZHX1Q9UKY1 873 aaPredicted RBP12.73□□□□□ -0.37
USP6-206ENST00000575709 CCDC9Q9Y3X0 531 aaKnown RBP12.73□□□□□ -0.37
USP6-206ENST00000575709 CBX1P83916 185 aa12.73□□□□□ -0.37
USP6-206ENST00000575709 GTF2A1P52655 376 aaPredicted RBP12.73□□□□□ -0.37
USP6-206ENST00000575709 OLFM4Q6UX06 510 aa12.73□□□□□ -0.37
USP6-206ENST00000575709 SPATA24Q86W54 205 aa12.73□□□□□ -0.37
USP6-206ENST00000575709 SLC4A10Q6U841 1118 aa12.73□□□□□ -0.37
USP6-206ENST00000575709 SMC2O95347 1197 aa12.73□□□□□ -0.37
USP6-206ENST00000575709 CFAP45Q9UL16 551 aa12.73□□□□□ -0.37
USP6-206ENST00000575709 TRIM5Q9C035 493 aa12.72□□□□□ -0.37
USP6-206ENST00000575709 CCER2I3L3R5 266 aa12.72□□□□□ -0.37
USP6-206ENST00000575709 CCP110O43303 1012 aa12.72□□□□□ -0.37
USP6-206ENST00000575709 CCDC102AQ96A19 550 aa12.72□□□□□ -0.37
USP6-206ENST00000575709 CLUAP1Q96AJ1 413 aa12.72□□□□□ -0.37
USP6-206ENST00000575709 NFKBIBQ15653 356 aa12.71□□□□□ -0.37
USP6-206ENST00000575709 GBP2P32456 591 aaPredicted RBP12.71□□□□□ -0.37
USP6-206ENST00000575709 TMX4Q9H1E5 349 aaPredicted RBP12.71□□□□□ -0.38
USP6-206ENST00000575709 MTUS2Q5JR59 1369 aa12.71□□□□□ -0.38
USP6-206ENST00000575709 MORC1Q86VD1 984 aa12.71□□□□□ -0.38
USP6-206ENST00000575709 CHMP5Q9NZZ3 219 aa12.7□□□□□ -0.38
USP6-206ENST00000575709 CGNL1Q0VF96 1302 aa12.7□□□□□ -0.38
USP6-206ENST00000575709 SYNE3Q6ZMZ3 975 aa12.7□□□□□ -0.38
USP6-206ENST00000575709 SLC26A8Q96RN1 970 aa12.7□□□□□ -0.38
USP6-206ENST00000575709 G3V3G9 751 aa12.69□□□□□ -0.38
USP6-206ENST00000575709 MAP2K1Q02750 393 aaPredicted RBP12.69□□□□□ -0.38
USP6-206ENST00000575709 DCAF8Q5TAQ9 597 aa12.69□□□□□ -0.38
USP6-206ENST00000575709 VPS37CA5D8V6 355 aaPredicted RBP12.69□□□□□ -0.38
USP6-206ENST00000575709 RAD21O60216 631 aa12.69□□□□□ -0.38
USP6-206ENST00000575709 CALCOCO1Q9P1Z2 691 aa12.69□□□□□ -0.38
USP6-206ENST00000575709 CHMP4CQ96CF2 233 aa12.69□□□□□ -0.38
USP6-206ENST00000575709 FAM177A1Q8N128 213 aaPredicted RBP12.68□□□□□ -0.38
USP6-206ENST00000575709 RABEP1Q15276 862 aa12.68□□□□□ -0.38
USP6-206ENST00000575709 ANKRD45Q5TZF3 282 aa12.68□□□□□ -0.38
USP6-206ENST00000575709 SMARCE1Q969G3 411 aa12.68□□□□□ -0.38
USP6-206ENST00000575709 SHTN1A0MZ66 631 aa12.68□□□□□ -0.38
USP6-206ENST00000575709 ERLIN1O75477 346 aa12.68□□□□□ -0.38
USP6-206ENST00000575709 UBE2Q2Q8WVN8 375 aa12.68□□□□□ -0.38
USP6-206ENST00000575709 CFAP57Q96MR6 1250 aa12.68□□□□□ -0.38
USP6-206ENST00000575709 FRAT2O75474 233 aaPredicted RBP12.68□□□□□ -0.38
USP6-206ENST00000575709 CCDC112Q8NEF3 446 aa12.68□□□□□ -0.38
USP6-206ENST00000575709 ZMYND15Q9H091 742 aa12.68□□□□□ -0.38
USP6-206ENST00000575709 ANO2Q9NQ90 1003 aa12.68□□□□□ -0.38
USP6-206ENST00000575709 BRPF1P55201 1214 aaPredicted RBP12.68□□□□□ -0.38
USP6-206ENST00000575709 CCDC181Q5TID7 509 aa12.68□□□□□ -0.38
USP6-206ENST00000575709 CCDC73Q6ZRK6 1079 aa12.67□□□□□ -0.38
USP6-206ENST00000575709 TMCO3Q6UWJ1 677 aa12.67□□□□□ -0.38
USP6-206ENST00000575709 CAVIN1Q6NZI2 390 aaKnown RBP12.67□□□□□ -0.38
USP6-206ENST00000575709 CENPQQ7L2Z9 268 aaPredicted RBP12.67□□□□□ -0.38
USP6-206ENST00000575709 PDCL2Q8N4E4 241 aa12.67□□□□□ -0.38
USP6-206ENST00000575709 TMF1P82094 1093 aa12.66□□□□□ -0.38
USP6-206ENST00000575709 KTN1Q86UP2 1357 aaKnown RBP12.66□□□□□ -0.38
USP6-206ENST00000575709 CCDC43Q96MW1 224 aaKnown RBP12.66□□□□□ -0.38
USP6-206ENST00000575709 TSPY26PQ9H489 355 aa12.66□□□□□ -0.38
USP6-206ENST00000575709 ZFP91Q96JP5 570 aaPredicted RBP12.65□□□□□ -0.38
USP6-206ENST00000575709 STK31Q9BXU1 1019 aa12.65□□□□□ -0.38
USP6-206ENST00000575709 RNF187Q5TA31 235 aaPredicted RBP12.65□□□□□ -0.38
USP6-206ENST00000575709 PLCD3Q8N3E9 789 aa12.65□□□□□ -0.38
USP6-206ENST00000575709 PAF1Q8N7H5 531 aa12.65□□□□□ -0.38
USP6-206ENST00000575709 PPM1EQ8WY54 764 aa12.65□□□□□ -0.38
USP6-206ENST00000575709 CPLX1O14810 134 aa12.65□□□□□ -0.39
USP6-206ENST00000575709 SIN3AQ96ST3 1273 aa12.64□□□□□ -0.39
USP6-206ENST00000575709 LRRFIP2Q9Y608 721 aaKnown RBP12.64□□□□□ -0.39
USP6-206ENST00000575709 CCDC175P0C221 793 aa12.64□□□□□ -0.39
USP6-206ENST00000575709 NUCB2P80303 420 aa12.64□□□□□ -0.39
USP6-206ENST00000575709 SMC3Q9UQE7 1217 aa12.64□□□□□ -0.39
USP6-206ENST00000575709 TRAK2O60296 914 aa12.64□□□□□ -0.39
USP6-206ENST00000575709 DDX23Q9BUQ8 820 aaKnown RBP12.64□□□□□ -0.39
USP6-206ENST00000575709 CPLX2Q6PUV4 134 aaKnown RBP12.63□□□□□ -0.39
USP6-206ENST00000575709 MPNDQ8N594 471 aa12.63□□□□□ -0.39
USP6-206ENST00000575709 PUS7Q96PZ0 661 aaKnown RBP12.63□□□□□ -0.39
USP6-206ENST00000575709 MNAT1P51948 309 aa12.63□□□□□ -0.39
USP6-206ENST00000575709 SEPT6Q14141 434 aa12.63□□□□□ -0.39
USP6-206ENST00000575709 CCDC91Q7Z6B0 441 aa12.63□□□□□ -0.39
USP6-206ENST00000575709 DAAM2Q86T65 1068 aa12.63□□□□□ -0.39
USP6-206ENST00000575709 LETM1O95202 739 aaPredicted RBP12.63□□□□□ -0.39
USP6-206ENST00000575709 CENPJQ9HC77 1338 aaPredicted RBP12.62□□□□□ -0.39
USP6-206ENST00000575709 RNF20Q5VTR2 975 aa12.62□□□□□ -0.39
USP6-206ENST00000575709 FMNL2Q96PY5 1086 aa12.62□□□□□ -0.39
USP6-206ENST00000575709 DNAJC2Q99543 621 aaKnown RBP12.62□□□□□ -0.39
USP6-206ENST00000575709 MICALCLQ6ZW33 695 aa12.62□□□□□ -0.39
USP6-206ENST00000575709 U2AF1L5P0DN76 240 aaPredicted RBP12.62□□□□□ -0.39
USP6-206ENST00000575709 U2AF1Q01081 240 aaKnown RBP eCLIP12.62□□□□□ -0.39
USP6-206ENST00000575709 CCDC97Q96F63 343 aaPredicted RBP12.62□□□□□ -0.39
USP6-206ENST00000575709 PAXIP1Q6ZW49 1069 aaPredicted RBP12.62□□□□□ -0.39
USP6-206ENST00000575709 SDF4Q9BRK5 362 aa12.61□□□□□ -0.39
USP6-206ENST00000575709 SRPK2P78362 688 aaKnown RBP12.61□□□□□ -0.39
USP6-206ENST00000575709 SYCP1Q15431 976 aa12.61□□□□□ -0.39
USP6-206ENST00000575709 STAMBPO95630 424 aa12.61□□□□□ -0.39
USP6-206ENST00000575709 POLR3GO15318 223 aaPredicted RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms