RNA–Protein interactions for RNA: ENST00000575168.1

CXCL16-204, Transcript of C-X-C motif chemokine ligand 16, humanhuman

TSL 5

Gene CXCL16, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-204ENST00000575168 SPATA31E1Q6ZUB1 1445 aa17.91■□□□□ 0.46
CXCL16-204ENST00000575168 VGFO15240 615 aaPredicted RBP17.91■□□□□ 0.46
CXCL16-204ENST00000575168 SIN3AQ96ST3 1273 aa17.91■□□□□ 0.46
CXCL16-204ENST00000575168 LMTK3Q96Q04 1460 aa17.9■□□□□ 0.46
CXCL16-204ENST00000575168 SLIT1O75093 1534 aa17.89■□□□□ 0.45
CXCL16-204ENST00000575168 RIMS2Q9UQ26 1411 aa17.89■□□□□ 0.45
CXCL16-204ENST00000575168 TXNDC2Q86VQ3 553 aa17.88■□□□□ 0.45
CXCL16-204ENST00000575168 ARHGAP23Q9P227 1491 aa17.87■□□□□ 0.45
CXCL16-204ENST00000575168 DMRT2Q9Y5R5 561 aa17.86■□□□□ 0.45
CXCL16-204ENST00000575168 SCAF11Q99590 1463 aaKnown RBP17.86■□□□□ 0.45
CXCL16-204ENST00000575168 PPLO60437 1756 aa17.86■□□□□ 0.45
CXCL16-204ENST00000575168 ZFYVE9O95405 1425 aa17.85■□□□□ 0.45
CXCL16-204ENST00000575168 DCAF11Q8TEB1 546 aa17.85■□□□□ 0.45
CXCL16-204ENST00000575168 POLR1AO95602 1720 aaPredicted RBP17.84■□□□□ 0.45
CXCL16-204ENST00000575168 BCANQ96GW7 911 aa17.84■□□□□ 0.45
CXCL16-204ENST00000575168 NEXMIFQ5QGS0 1516 aa17.83■□□□□ 0.45
CXCL16-204ENST00000575168 IFT172Q9UG01 1749 aa17.82■□□□□ 0.44
CXCL16-204ENST00000575168 HSPA2P54652 639 aa17.82■□□□□ 0.44
CXCL16-204ENST00000575168 L3MBTL2Q969R5 705 aa17.82■□□□□ 0.44
CXCL16-204ENST00000575168 MYOM2P54296 1465 aa17.82■□□□□ 0.44
CXCL16-204ENST00000575168 ZEB1P37275 1124 aaPredicted RBP17.81■□□□□ 0.44
CXCL16-204ENST00000575168 KDM2AQ9Y2K7 1162 aa17.81■□□□□ 0.44
CXCL16-204ENST00000575168 PLEKHG1Q9ULL1 1385 aa17.8■□□□□ 0.44
CXCL16-204ENST00000575168 MED14O60244 1454 aa17.78■□□□□ 0.44
CXCL16-204ENST00000575168 LTKP29376 864 aa17.78■□□□□ 0.44
CXCL16-204ENST00000575168 NPHP4O75161 1426 aaPredicted RBP17.77■□□□□ 0.44
CXCL16-204ENST00000575168 NCKAP5LQ9HCH0 1330 aa17.76■□□□□ 0.43
CXCL16-204ENST00000575168 NUTM2DQ5VT03 806 aaPredicted RBP17.76■□□□□ 0.43
CXCL16-204ENST00000575168 IQGAP1P46940 1657 aa17.76■□□□□ 0.43
CXCL16-204ENST00000575168 LAMC1P11047 1609 aa17.75■□□□□ 0.43
CXCL16-204ENST00000575168 DIP2AQ14689 1571 aa17.74■□□□□ 0.43
CXCL16-204ENST00000575168 SETBP1Q9Y6X0 1596 aa17.74■□□□□ 0.43
CXCL16-204ENST00000575168 TBX22Q9Y458 520 aa17.73■□□□□ 0.43
CXCL16-204ENST00000575168 NRXN1Q9ULB1 1477 aa17.73■□□□□ 0.43
CXCL16-204ENST00000575168 STRCQ7RTU9 1775 aa17.73■□□□□ 0.43
CXCL16-204ENST00000575168 ADGRF5Q8IZF2 1346 aa17.72■□□□□ 0.43
CXCL16-204ENST00000575168 KIAA1210Q9ULL0 1709 aa17.72■□□□□ 0.43
CXCL16-204ENST00000575168 PIK3C2GO75747 1445 aa17.72■□□□□ 0.43
CXCL16-204ENST00000575168 PRAG1Q86YV5 1406 aa17.72■□□□□ 0.43
CXCL16-204ENST00000575168 C14orf93Q9H972 538 aaKnown RBP17.7■□□□□ 0.42
CXCL16-204ENST00000575168 PIK3R4Q99570 1358 aa17.69■□□□□ 0.42
CXCL16-204ENST00000575168 SLC26A8Q96RN1 970 aa17.68■□□□□ 0.42
CXCL16-204ENST00000575168 ALKQ9UM73 1620 aa17.68■□□□□ 0.42
CXCL16-204ENST00000575168 NRXN3Q9Y4C0 1643 aa17.65■□□□□ 0.42
CXCL16-204ENST00000575168 ADAMTS13Q76LX8 1427 aa17.64■□□□□ 0.42
CXCL16-204ENST00000575168 CFAP70Q5T0N1 1121 aa17.64■□□□□ 0.41
CXCL16-204ENST00000575168 ROCK2O75116 1388 aaKnown RBP17.64■□□□□ 0.41
CXCL16-204ENST00000575168 TRPM1Q7Z4N2 1603 aa17.63■□□□□ 0.41
CXCL16-204ENST00000575168 SENP3Q9H4L4 574 aaPredicted RBP17.63■□□□□ 0.41
CXCL16-204ENST00000575168 RALGAPBQ86X10 1494 aa17.63■□□□□ 0.41
CXCL16-204ENST00000575168 KCNA6P17658 529 aa17.61■□□□□ 0.41
CXCL16-204ENST00000575168 NBPF8Q3BBV2 869 aa17.6■□□□□ 0.41
CXCL16-204ENST00000575168 SETD1AO15047 1707 aaKnown RBP17.6■□□□□ 0.41
CXCL16-204ENST00000575168 CHD2O14647 1828 aaKnown RBP17.6■□□□□ 0.41
CXCL16-204ENST00000575168 EIF3AQ14152 1382 aaKnown RBP17.59■□□□□ 0.41
CXCL16-204ENST00000575168 CARD11Q9BXL7 1154 aa17.59■□□□□ 0.41
CXCL16-204ENST00000575168 LRPPRCP42704 1394 aaKnown RBP17.58■□□□□ 0.4
CXCL16-204ENST00000575168 YTHDC2Q9H6S0 1430 aaKnown RBP17.57■□□□□ 0.4
CXCL16-204ENST00000575168 METP08581 1390 aa17.57■□□□□ 0.4
CXCL16-204ENST00000575168 ABCC11Q96J66 1382 aa17.57■□□□□ 0.4
CXCL16-204ENST00000575168 SLC24A1O60721 1099 aa17.57■□□□□ 0.4
CXCL16-204ENST00000575168 TMEM132EQ6IEE7 984 aa17.57■□□□□ 0.4
CXCL16-204ENST00000575168 AMOTL2Q9Y2J4 779 aa17.57■□□□□ 0.4
CXCL16-204ENST00000575168 GPRASP1Q5JY77 1395 aa17.56■□□□□ 0.4
CXCL16-204ENST00000575168 SIRT1Q96EB6 747 aa17.56■□□□□ 0.4
CXCL16-204ENST00000575168 NKTRP30414 1462 aaKnown RBP17.56■□□□□ 0.4
CXCL16-204ENST00000575168 ADGRB1O14514 1584 aa17.55■□□□□ 0.4
CXCL16-204ENST00000575168 NBPF1Q3BBV0 1214 aa17.55■□□□□ 0.4
CXCL16-204ENST00000575168 STK26Q9P289 416 aa17.55■□□□□ 0.4
CXCL16-204ENST00000575168 CPS1P31327 1500 aa17.55■□□□□ 0.4
CXCL16-204ENST00000575168 KNDC1Q76NI1 1749 aa17.55■□□□□ 0.4
CXCL16-204ENST00000575168 NWD1Q149M9 1564 aa17.54■□□□□ 0.4
CXCL16-204ENST00000575168 TECPR2O15040 1411 aa17.54■□□□□ 0.4
CXCL16-204ENST00000575168 DLC1Q96QB1 1528 aa17.53■□□□□ 0.4
CXCL16-204ENST00000575168 POGKQ9P215 609 aa17.53■□□□□ 0.4
CXCL16-204ENST00000575168 PTCH1Q13635 1447 aa17.53■□□□□ 0.4
CXCL16-204ENST00000575168 FAM135BQ49AJ0 1406 aa17.53■□□□□ 0.4
CXCL16-204ENST00000575168 XRN1Q8IZH2 1706 aaKnown RBP17.52■□□□□ 0.4
CXCL16-204ENST00000575168 PROSER2Q86WR7 435 aaPredicted RBP17.52■□□□□ 0.4
CXCL16-204ENST00000575168 TRAK1Q9UPV9 953 aa17.52■□□□□ 0.4
CXCL16-204ENST00000575168 ASXL1Q8IXJ9 1541 aa17.52■□□□□ 0.39
CXCL16-204ENST00000575168 ZNF335Q9H4Z2 1342 aaPredicted RBP17.5■□□□□ 0.39
CXCL16-204ENST00000575168 NCOA3Q9Y6Q9 1424 aa17.5■□□□□ 0.39
CXCL16-204ENST00000575168 PTPRUQ92729 1446 aa17.49■□□□□ 0.39
CXCL16-204ENST00000575168 EIF4G2P78344 907 aaKnown RBP eCLIP17.49■□□□□ 0.39
CXCL16-204ENST00000575168 C14orf37Q86TY3 774 aa17.49■□□□□ 0.39
CXCL16-204ENST00000575168 CENPJQ9HC77 1338 aaPredicted RBP17.47■□□□□ 0.39
CXCL16-204ENST00000575168 ARHGEF28Q8N1W1 1705 aaKnown RBP17.47■□□□□ 0.39
CXCL16-204ENST00000575168 USP47Q96K76 1375 aa17.47■□□□□ 0.39
CXCL16-204ENST00000575168 PRAM1Q96QH2 718 aa17.46■□□□□ 0.39
CXCL16-204ENST00000575168 ROBO2Q9HCK4 1378 aa17.44■□□□□ 0.38
CXCL16-204ENST00000575168 STRCP1A6NGW2 1772 aa17.44■□□□□ 0.38
CXCL16-204ENST00000575168 MSH6P52701 1360 aa17.42■□□□□ 0.38
CXCL16-204ENST00000575168 TMEM94Q12767 1356 aa17.42■□□□□ 0.38
CXCL16-204ENST00000575168 C19orf44Q9H6X5 657 aa17.42■□□□□ 0.38
CXCL16-204ENST00000575168 LRRC7Q96NW7 1537 aa17.42■□□□□ 0.38
CXCL16-204ENST00000575168 SBNO2Q9Y2G9 1366 aa17.41■□□□□ 0.38
CXCL16-204ENST00000575168 LTBP4Q8N2S1 1624 aa17.41■□□□□ 0.38
CXCL16-204ENST00000575168 CDCA8Q53HL2 280 aa17.41■□□□□ 0.38
CXCL16-204ENST00000575168 WAPLQ7Z5K2 1190 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms