RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 MAGI1Q96QZ7 1491 aaPredicted RBP11.02□□□□□ -0.65
RPAIN-215ENST00000575112 PPP2R1AP30153 589 aa11.02□□□□□ -0.65
RPAIN-215ENST00000575112 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.02□□□□□ -0.65
RPAIN-215ENST00000575112 PANK1Q8TE04 598 aa11.02□□□□□ -0.65
RPAIN-215ENST00000575112 CDCA8Q53HL2 280 aa11.01□□□□□ -0.65
RPAIN-215ENST00000575112 GGNBP2Q9H3C7 697 aa11.01□□□□□ -0.65
RPAIN-215ENST00000575112 IGHDP01880 384 aa11□□□□□ -0.65
RPAIN-215ENST00000575112 RSPH4AQ5TD94 716 aa11□□□□□ -0.65
RPAIN-215ENST00000575112 DUSP27Q5VZP5 1158 aa11□□□□□ -0.65
RPAIN-215ENST00000575112 TESK2Q96S53 571 aa10.99□□□□□ -0.65
RPAIN-215ENST00000575112 ADGRF5Q8IZF2 1346 aa10.99□□□□□ -0.65
RPAIN-215ENST00000575112 APBB1O00213 710 aa10.99□□□□□ -0.65
RPAIN-215ENST00000575112 SYNJ2O15056 1496 aa10.99□□□□□ -0.65
RPAIN-215ENST00000575112 KANK1Q14678 1352 aa10.99□□□□□ -0.65
RPAIN-215ENST00000575112 E9PCH4 1651 aa10.98□□□□□ -0.65
RPAIN-215ENST00000575112 C14orf37Q86TY3 774 aa10.98□□□□□ -0.65
RPAIN-215ENST00000575112 FAM161AQ3B820 660 aa10.98□□□□□ -0.65
RPAIN-215ENST00000575112 UHRF1BP1Q6BDS2 1440 aa10.98□□□□□ -0.65
RPAIN-215ENST00000575112 TARBP1Q13395 1621 aaKnown RBP10.97□□□□□ -0.65
RPAIN-215ENST00000575112 FTSJ3Q8IY81 847 aaKnown RBP10.97□□□□□ -0.65
RPAIN-215ENST00000575112 DDRGK1Q96HY6 314 aa10.97□□□□□ -0.65
RPAIN-215ENST00000575112 TNNQ9UQP3 1299 aa10.97□□□□□ -0.65
RPAIN-215ENST00000575112 PDE3BQ13370 1112 aa10.97□□□□□ -0.65
RPAIN-215ENST00000575112 USP19O94966 1318 aa10.97□□□□□ -0.65
RPAIN-215ENST00000575112 MTHFSP49914 203 aa10.96□□□□□ -0.65
RPAIN-215ENST00000575112 RRAGDQ9NQL2 400 aaPredicted RBP10.96□□□□□ -0.65
RPAIN-215ENST00000575112 TPRNQ4KMQ1 711 aa10.95□□□□□ -0.66
RPAIN-215ENST00000575112 CFAP53Q96M91 514 aa10.95□□□□□ -0.66
RPAIN-215ENST00000575112 PBRM1Q86U86 1689 aa10.95□□□□□ -0.66
RPAIN-215ENST00000575112 TSR2Q969E8 191 aaKnown RBP10.95□□□□□ -0.66
RPAIN-215ENST00000575112 GZF1Q9H116 711 aaPredicted RBP10.94□□□□□ -0.66
RPAIN-215ENST00000575112 CENPQQ7L2Z9 268 aaPredicted RBP10.94□□□□□ -0.66
RPAIN-215ENST00000575112 ADAMTS12P58397 1594 aa10.93□□□□□ -0.66
RPAIN-215ENST00000575112 BLMP54132 1417 aaPredicted RBP10.93□□□□□ -0.66
RPAIN-215ENST00000575112 HMOX1P09601 288 aa10.93□□□□□ -0.66
RPAIN-215ENST00000575112 MAPK8IP3Q9UPT6 1336 aa10.93□□□□□ -0.66
RPAIN-215ENST00000575112 RAPGEF6Q8TEU7 1601 aa10.92□□□□□ -0.66
RPAIN-215ENST00000575112 UBE2Q2Q8WVN8 375 aa10.92□□□□□ -0.66
RPAIN-215ENST00000575112 PANK2Q9BZ23 570 aa10.92□□□□□ -0.66
RPAIN-215ENST00000575112 KIAA0556O60303 1618 aa10.92□□□□□ -0.66
RPAIN-215ENST00000575112 PRAG1Q86YV5 1406 aa10.92□□□□□ -0.66
RPAIN-215ENST00000575112 TCP11L2Q8N4U5 519 aa10.92□□□□□ -0.66
RPAIN-215ENST00000575112 ERBINQ96RT1 1412 aa10.92□□□□□ -0.66
RPAIN-215ENST00000575112 MAGI2Q86UL8 1455 aa10.91□□□□□ -0.66
RPAIN-215ENST00000575112 ITPRIPQ8IWB1 547 aa10.91□□□□□ -0.66
RPAIN-215ENST00000575112 KDM5DQ9BY66 1539 aa10.91□□□□□ -0.66
RPAIN-215ENST00000575112 FBXO31Q5XUX0 539 aaPredicted RBP10.91□□□□□ -0.66
RPAIN-215ENST00000575112 ZMYM4Q5VZL5 1548 aa10.91□□□□□ -0.66
RPAIN-215ENST00000575112 TRAPPC8Q9Y2L5 1435 aa10.91□□□□□ -0.66
RPAIN-215ENST00000575112 CENPJQ9HC77 1338 aaPredicted RBP10.91□□□□□ -0.66
RPAIN-215ENST00000575112 ADGBQ8N7X0 1667 aa10.91□□□□□ -0.66
RPAIN-215ENST00000575112 FOXD4L1Q9NU39 408 aa10.9□□□□□ -0.66
RPAIN-215ENST00000575112 SMC4Q9NTJ3 1288 aa10.9□□□□□ -0.66
RPAIN-215ENST00000575112 OSCARQ8IYS5 282 aa10.9□□□□□ -0.67
RPAIN-215ENST00000575112 PLA2R1Q13018 1463 aa10.89□□□□□ -0.67
RPAIN-215ENST00000575112 EIF4G3O43432 1585 aaKnown RBP10.89□□□□□ -0.67
RPAIN-215ENST00000575112 ZNF428Q96B54 188 aa10.89□□□□□ -0.67
RPAIN-215ENST00000575112 ZNF521Q96K83 1311 aa10.89□□□□□ -0.67
RPAIN-215ENST00000575112 SLFN5Q08AF3 891 aa10.89□□□□□ -0.67
RPAIN-215ENST00000575112 THUMPD2Q9BTF0 503 aaKnown RBP10.89□□□□□ -0.67
RPAIN-215ENST00000575112 A2MP01023 1474 aa10.89□□□□□ -0.67
RPAIN-215ENST00000575112 CEP170Q5SW79 1584 aa10.89□□□□□ -0.67
RPAIN-215ENST00000575112 TRPM1Q7Z4N2 1603 aa10.89□□□□□ -0.67
RPAIN-215ENST00000575112 CCDC141Q6ZP82 1450 aa10.89□□□□□ -0.67
RPAIN-215ENST00000575112 CDC42BPAQ5VT25 1732 aa10.88□□□□□ -0.67
RPAIN-215ENST00000575112 HSP90AA1P07900 732 aaKnown RBP10.88□□□□□ -0.67
RPAIN-215ENST00000575112 LMOD2Q6P5Q4 547 aa10.88□□□□□ -0.67
RPAIN-215ENST00000575112 ADGRL2O95490 1459 aa10.88□□□□□ -0.67
RPAIN-215ENST00000575112 CROCC2H7BZ55 1655 aa10.88□□□□□ -0.67
RPAIN-215ENST00000575112 CARD14Q9BXL6 1004 aa10.88□□□□□ -0.67
RPAIN-215ENST00000575112 COL17A1Q9UMD9 1497 aaPredicted RBP10.88□□□□□ -0.67
RPAIN-215ENST00000575112 SYCP2Q9BX26 1530 aa10.88□□□□□ -0.67
RPAIN-215ENST00000575112 AMER1Q5JTC6 1135 aaPredicted RBP10.88□□□□□ -0.67
RPAIN-215ENST00000575112 FAM69CQ0P6D2 419 aa10.87□□□□□ -0.67
RPAIN-215ENST00000575112 WAPLQ7Z5K2 1190 aa10.87□□□□□ -0.67
RPAIN-215ENST00000575112 UPF2Q9HAU5 1272 aaKnown RBP10.87□□□□□ -0.67
RPAIN-215ENST00000575112 RLBP1P12271 317 aa10.87□□□□□ -0.67
RPAIN-215ENST00000575112 MFAP1P55081 439 aaKnown RBP10.87□□□□□ -0.67
RPAIN-215ENST00000575112 PRAM1Q96QH2 718 aa10.86□□□□□ -0.67
RPAIN-215ENST00000575112 ARHGEF12Q9NZN5 1544 aa10.86□□□□□ -0.67
RPAIN-215ENST00000575112 NUTM2GQ5VZR2 741 aa10.86□□□□□ -0.67
RPAIN-215ENST00000575112 LTV1Q96GA3 475 aaPredicted RBP10.86□□□□□ -0.67
RPAIN-215ENST00000575112 NECTIN2Q92692 538 aa10.85□□□□□ -0.67
RPAIN-215ENST00000575112 PCDHB15Q9Y5E8 787 aa10.85□□□□□ -0.67
RPAIN-215ENST00000575112 FAM135AQ9P2D6 1515 aa10.85□□□□□ -0.67
RPAIN-215ENST00000575112 C1orf115Q9H7X2 142 aa10.85□□□□□ -0.67
RPAIN-215ENST00000575112 ADCY10Q96PN6 1610 aa10.85□□□□□ -0.67
RPAIN-215ENST00000575112 RBM33Q96EV2 1170 aaKnown RBP10.84□□□□□ -0.67
RPAIN-215ENST00000575112 CFAP65Q6ZU64 1925 aaKnown RBP10.84□□□□□ -0.67
RPAIN-215ENST00000575112 CABP1Q9NZU7 370 aa10.84□□□□□ -0.67
RPAIN-215ENST00000575112 RIPK4P57078 832 aa10.84□□□□□ -0.67
RPAIN-215ENST00000575112 FAM43AQ8N2R8 423 aa10.84□□□□□ -0.67
RPAIN-215ENST00000575112 WDR7Q9Y4E6 1490 aa10.83□□□□□ -0.68
RPAIN-215ENST00000575112 XRCC6P12956 609 aaKnown RBP eCLIP10.83□□□□□ -0.68
RPAIN-215ENST00000575112 TBC1D2Q9BYX2 928 aa10.83□□□□□ -0.68
RPAIN-215ENST00000575112 ANTXR1Q9H6X2 564 aa10.83□□□□□ -0.68
RPAIN-215ENST00000575112 IDI1Q13907 227 aa10.83□□□□□ -0.68
RPAIN-215ENST00000575112 E9PSI1 815 aa10.83□□□□□ -0.68
RPAIN-215ENST00000575112 EXOSC9Q06265 439 aaKnown RBP10.83□□□□□ -0.68
RPAIN-215ENST00000575112 TXNDC2Q86VQ3 553 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms