RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 PANK3Q9H999 370 aa32.17■■■□□ 2.74
NPLOC4-217ENST00000574897 STAC3Q96MF2 364 aa32.16■■■□□ 2.74
NPLOC4-217ENST00000574897 CFAP70Q5T0N1 1121 aa32.15■■■□□ 2.74
NPLOC4-217ENST00000574897 KTN1Q86UP2 1357 aaKnown RBP32.14■■■□□ 2.74
NPLOC4-217ENST00000574897 ABCC3O15438 1527 aa32.14■■■□□ 2.74
NPLOC4-217ENST00000574897 PARD3Q8TEW0 1356 aa32.14■■■□□ 2.74
NPLOC4-217ENST00000574897 MYOM2P54296 1465 aa32.13■■■□□ 2.73
NPLOC4-217ENST00000574897 CHGAP10645 457 aaKnown RBP32.12■■■□□ 2.73
NPLOC4-217ENST00000574897 SIGLEC1Q9BZZ2 1709 aa32.12■■■□□ 2.73
NPLOC4-217ENST00000574897 BRD4O60885 1362 aaPredicted RBP32.12■■■□□ 2.73
NPLOC4-217ENST00000574897 WASHC2CQ9Y4E1 1318 aa32.12■■■□□ 2.73
NPLOC4-217ENST00000574897 ADGRB3O60242 1522 aa32.11■■■□□ 2.73
NPLOC4-217ENST00000574897 CC2D1BQ5T0F9 858 aaKnown RBP32.11■■■□□ 2.73
NPLOC4-217ENST00000574897 CAMSAP1Q5T5Y3 1602 aa32.11■■■□□ 2.73
NPLOC4-217ENST00000574897 YEATS2Q9ULM3 1422 aa32.09■■■□□ 2.73
NPLOC4-217ENST00000574897 NOS1P29475 1434 aa32.07■■■□□ 2.72
NPLOC4-217ENST00000574897 TSPOAP1O95153 1857 aa32.06■■■□□ 2.72
NPLOC4-217ENST00000574897 LRPPRCP42704 1394 aaKnown RBP32.06■■■□□ 2.72
NPLOC4-217ENST00000574897 PPLO60437 1756 aa32.06■■■□□ 2.72
NPLOC4-217ENST00000574897 GLI2P10070 1586 aa32.04■■■□□ 2.72
NPLOC4-217ENST00000574897 MYOM1P52179 1685 aa32.03■■■□□ 2.72
NPLOC4-217ENST00000574897 NLRP13Q86W25 1043 aa32.02■■■□□ 2.72
NPLOC4-217ENST00000574897 NRXN1Q9ULB1 1477 aa32.02■■■□□ 2.72
NPLOC4-217ENST00000574897 FAM69CQ0P6D2 419 aa32■■■□□ 2.71
NPLOC4-217ENST00000574897 DIP2BQ9P265 1576 aa31.99■■■□□ 2.71
NPLOC4-217ENST00000574897 EIF3AQ14152 1382 aaKnown RBP31.99■■■□□ 2.71
NPLOC4-217ENST00000574897 SYNMO15061 1565 aa31.98■■■□□ 2.71
NPLOC4-217ENST00000574897 KDM5AP29375 1690 aaKnown RBP31.96■■■□□ 2.71
NPLOC4-217ENST00000574897 SMG6Q86US8 1419 aaKnown RBP31.93■■■□□ 2.7
NPLOC4-217ENST00000574897 PIK3C2BO00750 1634 aa31.93■■■□□ 2.7
NPLOC4-217ENST00000574897 TSHZ2Q9NRE2 1034 aa31.93■■■□□ 2.7
NPLOC4-217ENST00000574897 ERVK-7P63135 1459 aa31.91■■■□□ 2.7
NPLOC4-217ENST00000574897 NUTM2DQ5VT03 806 aaPredicted RBP31.9■■■□□ 2.7
NPLOC4-217ENST00000574897 PIK3C2GO75747 1445 aa31.9■■■□□ 2.7
NPLOC4-217ENST00000574897 CDCA8Q53HL2 280 aa31.9■■■□□ 2.7
NPLOC4-217ENST00000574897 ZC3H13Q5T200 1668 aaKnown RBP31.9■■■□□ 2.7
NPLOC4-217ENST00000574897 NUDCQ9Y266 331 aa31.88■■■□□ 2.69
NPLOC4-217ENST00000574897 KNSTRNQ9Y448 316 aa31.88■■■□□ 2.69
NPLOC4-217ENST00000574897 MYO3AQ8NEV4 1616 aa31.88■■■□□ 2.69
NPLOC4-217ENST00000574897 MYO5BQ9ULV0 1848 aa31.87■■■□□ 2.69
NPLOC4-217ENST00000574897 SETBP1Q9Y6X0 1596 aa31.87■■■□□ 2.69
NPLOC4-217ENST00000574897 AMER1Q5JTC6 1135 aaPredicted RBP31.85■■■□□ 2.69
NPLOC4-217ENST00000574897 TMEM132EQ6IEE7 984 aa31.85■■■□□ 2.69
NPLOC4-217ENST00000574897 SALL2Q9Y467 1007 aaPredicted RBP31.85■■■□□ 2.69
NPLOC4-217ENST00000574897 ZMYM4Q5VZL5 1548 aa31.84■■■□□ 2.69
NPLOC4-217ENST00000574897 TRAK1Q9UPV9 953 aa31.84■■■□□ 2.69
NPLOC4-217ENST00000574897 ADGRB1O14514 1584 aa31.83■■■□□ 2.69
NPLOC4-217ENST00000574897 C14orf93Q9H972 538 aaKnown RBP31.82■■■□□ 2.69
NPLOC4-217ENST00000574897 ARHGAP31Q2M1Z3 1444 aa31.82■■■□□ 2.68
NPLOC4-217ENST00000574897 NEXMIFQ5QGS0 1516 aa31.82■■■□□ 2.68
NPLOC4-217ENST00000574897 PREX1Q8TCU6 1659 aa31.81■■■□□ 2.68
NPLOC4-217ENST00000574897 IDI1Q13907 227 aa31.81■■■□□ 2.68
NPLOC4-217ENST00000574897 QRICH2Q9H0J4 1663 aa31.8■■■□□ 2.68
NPLOC4-217ENST00000574897 ASXL1Q8IXJ9 1541 aa31.8■■■□□ 2.68
NPLOC4-217ENST00000574897 SENP3Q9H4L4 574 aaPredicted RBP31.79■■■□□ 2.68
NPLOC4-217ENST00000574897 RPGRIP1LQ68CZ1 1315 aa31.79■■■□□ 2.68
NPLOC4-217ENST00000574897 CENPJQ9HC77 1338 aaPredicted RBP31.78■■■□□ 2.68
NPLOC4-217ENST00000574897 PPP2R1AP30153 589 aa31.76■■■□□ 2.68
NPLOC4-217ENST00000574897 SBNO2Q9Y2G9 1366 aa31.72■■■□□ 2.67
NPLOC4-217ENST00000574897 FBXO31Q5XUX0 539 aaPredicted RBP31.72■■■□□ 2.67
NPLOC4-217ENST00000574897 BLMP54132 1417 aaPredicted RBP31.71■■■□□ 2.67
NPLOC4-217ENST00000574897 CARD14Q9BXL6 1004 aa31.71■■■□□ 2.67
NPLOC4-217ENST00000574897 ERICH6BQ5W0A0 696 aa31.7■■■□□ 2.67
NPLOC4-217ENST00000574897 PPP4R2Q9NY27 417 aa31.7■■■□□ 2.67
NPLOC4-217ENST00000574897 KIF13AQ9H1H9 1805 aa31.69■■■□□ 2.66
NPLOC4-217ENST00000574897 ARHGEF28Q8N1W1 1705 aaKnown RBP31.69■■■□□ 2.66
NPLOC4-217ENST00000574897 TMEM131LA2VDJ0 1609 aa31.69■■■□□ 2.66
NPLOC4-217ENST00000574897 VGFO15240 615 aaPredicted RBP31.67■■■□□ 2.66
NPLOC4-217ENST00000574897 SLC24A1O60721 1099 aa31.67■■■□□ 2.66
NPLOC4-217ENST00000574897 ADAMTS8Q9UP79 889 aa31.66■■■□□ 2.66
NPLOC4-217ENST00000574897 RNF123Q5XPI4 1314 aa31.66■■■□□ 2.66
NPLOC4-217ENST00000574897 SLC52A1Q9NWF4 448 aa31.66■■■□□ 2.66
NPLOC4-217ENST00000574897 B4GALNT3Q6L9W6 998 aa31.64■■■□□ 2.66
NPLOC4-217ENST00000574897 CLTCQ00610 1675 aaKnown RBP31.64■■■□□ 2.66
NPLOC4-217ENST00000574897 NPC1L1Q9UHC9 1359 aa31.64■■■□□ 2.65
NPLOC4-217ENST00000574897 CDCA7LQ96GN5 454 aa31.63■■■□□ 2.65
NPLOC4-217ENST00000574897 REREQ9P2R6 1566 aa31.59■■■□□ 2.65
NPLOC4-217ENST00000574897 SLC12A5Q9H2X9 1139 aa31.59■■■□□ 2.65
NPLOC4-217ENST00000574897 INSRP06213 1382 aa31.59■■■□□ 2.65
NPLOC4-217ENST00000574897 MLECQ14165 292 aa31.58■■■□□ 2.65
NPLOC4-217ENST00000574897 AGLP35573 1532 aa31.56■■■□□ 2.64
NPLOC4-217ENST00000574897 SAFB2Q14151 953 aaKnown RBP eCLIP31.56■■■□□ 2.64
NPLOC4-217ENST00000574897 TULP4Q9NRJ4 1543 aa31.55■■■□□ 2.64
NPLOC4-217ENST00000574897 WDR43Q15061 677 aaKnown RBP eCLIP31.55■■■□□ 2.64
NPLOC4-217ENST00000574897 STK26Q9P289 416 aa31.54■■■□□ 2.64
NPLOC4-217ENST00000574897 ZFYVE9O95405 1425 aa31.54■■■□□ 2.64
NPLOC4-217ENST00000574897 NSD3Q9BZ95 1437 aa31.53■■■□□ 2.64
NPLOC4-217ENST00000574897 PDE3BQ13370 1112 aa31.52■■■□□ 2.64
NPLOC4-217ENST00000574897 RCAN3Q9UKA8 241 aa31.49■■■□□ 2.63
NPLOC4-217ENST00000574897 ARHGEF40Q8TER5 1519 aa31.47■■■□□ 2.63
NPLOC4-217ENST00000574897 PLEKHH1Q9ULM0 1364 aa31.47■■■□□ 2.63
NPLOC4-217ENST00000574897 CABP2Q9NPB3 220 aa31.46■■■□□ 2.63
NPLOC4-217ENST00000574897 STAG3Q9UJ98 1225 aa31.46■■■□□ 2.63
NPLOC4-217ENST00000574897 EVC2Q86UK5 1308 aa31.45■■■□□ 2.63
NPLOC4-217ENST00000574897 CCDC146Q8IYE0 955 aa31.44■■■□□ 2.62
NPLOC4-217ENST00000574897 RRP1P56182 461 aaKnown RBP31.44■■■□□ 2.62
NPLOC4-217ENST00000574897 TNNT2P45379 298 aaPredicted RBP31.42■■■□□ 2.62
NPLOC4-217ENST00000574897 RBM19Q9Y4C8 960 aaKnown RBP31.42■■■□□ 2.62
NPLOC4-217ENST00000574897 SPATA31D1Q6ZQQ2 1576 aa31.42■■■□□ 2.62
NPLOC4-217ENST00000574897 PTPRMP28827 1452 aa31.42■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 151.7 ms