RNA–Protein interactions for RNA: ENST00000574776.5

CTNS-209, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 4

Gene CTNS, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-209ENST00000574776 TMEM94Q12767 1356 aa23.32■■□□□ 1.32
CTNS-209ENST00000574776 CHGAP10645 457 aaKnown RBP23.32■■□□□ 1.32
CTNS-209ENST00000574776 HDGFP51858 240 aaKnown RBP23.31■■□□□ 1.32
CTNS-209ENST00000574776 PPP1R15AO75807 674 aaPredicted RBP23.3■■□□□ 1.32
CTNS-209ENST00000574776 UNC13BO14795 1591 aa23.3■■□□□ 1.32
CTNS-209ENST00000574776 MYO5BQ9ULV0 1848 aa23.29■■□□□ 1.32
CTNS-209ENST00000574776 GCC2Q8IWJ2 1684 aa23.28■■□□□ 1.32
CTNS-209ENST00000574776 RIMS2Q9UQ26 1411 aa23.28■■□□□ 1.32
CTNS-209ENST00000574776 NUP155O75694 1391 aa23.27■■□□□ 1.32
CTNS-209ENST00000574776 ZFYVE9O95405 1425 aa23.27■■□□□ 1.32
CTNS-209ENST00000574776 PHF23Q9BUL5 403 aaPredicted RBP23.27■■□□□ 1.32
CTNS-209ENST00000574776 NUTM2DQ5VT03 806 aaPredicted RBP23.26■■□□□ 1.31
CTNS-209ENST00000574776 TMEM131LA2VDJ0 1609 aa23.26■■□□□ 1.31
CTNS-209ENST00000574776 E9PCH4 1651 aa23.25■■□□□ 1.31
CTNS-209ENST00000574776 PLEKHG1Q9ULL1 1385 aa23.25■■□□□ 1.31
CTNS-209ENST00000574776 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.24■■□□□ 1.31
CTNS-209ENST00000574776 FAM135BQ49AJ0 1406 aa23.23■■□□□ 1.31
CTNS-209ENST00000574776 TBX22Q9Y458 520 aa23.22■■□□□ 1.31
CTNS-209ENST00000574776 IQGAP3Q86VI3 1631 aa23.22■■□□□ 1.31
CTNS-209ENST00000574776 NKTRP30414 1462 aaKnown RBP23.19■■□□□ 1.3
CTNS-209ENST00000574776 NWD1Q149M9 1564 aa23.18■■□□□ 1.3
CTNS-209ENST00000574776 CHD2O14647 1828 aaKnown RBP23.17■■□□□ 1.3
CTNS-209ENST00000574776 MSH6P52701 1360 aa23.17■■□□□ 1.3
CTNS-209ENST00000574776 SLAIN2Q9P270 581 aa23.16■■□□□ 1.3
CTNS-209ENST00000574776 ADAMTS13Q76LX8 1427 aa23.13■■□□□ 1.29
CTNS-209ENST00000574776 ROBO1Q9Y6N7 1651 aa23.13■■□□□ 1.29
CTNS-209ENST00000574776 C14orf37Q86TY3 774 aa23.11■■□□□ 1.29
CTNS-209ENST00000574776 RGS17Q9UGC6 210 aaPredicted RBP23.1■■□□□ 1.29
CTNS-209ENST00000574776 ZNF326Q5BKZ1 582 aaKnown RBP23.08■■□□□ 1.29
CTNS-209ENST00000574776 PIK3R4Q99570 1358 aa23.07■■□□□ 1.28
CTNS-209ENST00000574776 AMOTL2Q9Y2J4 779 aa23.07■■□□□ 1.28
CTNS-209ENST00000574776 RRBP1Q9P2E9 1410 aaKnown RBP23.07■■□□□ 1.28
CTNS-209ENST00000574776 NCOA3Q9Y6Q9 1424 aa23.06■■□□□ 1.28
CTNS-209ENST00000574776 C19orf44Q9H6X5 657 aa23.05■■□□□ 1.28
CTNS-209ENST00000574776 DIP2AQ14689 1571 aa23.04■■□□□ 1.28
CTNS-209ENST00000574776 SPHKAPQ2M3C7 1700 aa23.03■■□□□ 1.28
CTNS-209ENST00000574776 PTPRUQ92729 1446 aa23.03■■□□□ 1.28
CTNS-209ENST00000574776 NAIPQ13075 1403 aa23.02■■□□□ 1.28
CTNS-209ENST00000574776 ATF3P18847 181 aa23.02■■□□□ 1.28
CTNS-209ENST00000574776 CADPS2Q86UW7 1296 aa23.02■■□□□ 1.28
CTNS-209ENST00000574776 TRIM52Q96A61 297 aa23.01■■□□□ 1.27
CTNS-209ENST00000574776 TRPM2O94759 1503 aa23.01■■□□□ 1.27
CTNS-209ENST00000574776 PHLPP1O60346 1717 aa22.99■■□□□ 1.27
CTNS-209ENST00000574776 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.98■■□□□ 1.27
CTNS-209ENST00000574776 POTEAQ6S8J7 498 aa22.97■■□□□ 1.27
CTNS-209ENST00000574776 JCADQ9P266 1359 aa22.96■■□□□ 1.27
CTNS-209ENST00000574776 NRXN3Q9Y4C0 1643 aa22.96■■□□□ 1.27
CTNS-209ENST00000574776 METP08581 1390 aa22.95■■□□□ 1.26
CTNS-209ENST00000574776 CLTCL1P53675 1640 aa22.95■■□□□ 1.26
CTNS-209ENST00000574776 SETBP1Q9Y6X0 1596 aa22.94■■□□□ 1.26
CTNS-209ENST00000574776 SLC4A1APQ9BWU0 796 aaKnown RBP22.92■■□□□ 1.26
CTNS-209ENST00000574776 BRINP3Q76B58 766 aa22.91■■□□□ 1.26
CTNS-209ENST00000574776 HFM1A2PYH4 1435 aa22.91■■□□□ 1.26
CTNS-209ENST00000574776 COL16A1Q07092 1604 aaPredicted RBP22.9■■□□□ 1.26
CTNS-209ENST00000574776 KIF1BO60333 1816 aa22.9■■□□□ 1.26
CTNS-209ENST00000574776 NEXMIFQ5QGS0 1516 aa22.9■■□□□ 1.26
CTNS-209ENST00000574776 XRN1Q8IZH2 1706 aaKnown RBP22.88■■□□□ 1.25
CTNS-209ENST00000574776 VGFO15240 615 aaPredicted RBP22.88■■□□□ 1.25
CTNS-209ENST00000574776 SPATA31A6Q5VVP1 1343 aa22.85■■□□□ 1.25
CTNS-209ENST00000574776 FOXD1Q16676 465 aa22.85■■□□□ 1.25
CTNS-209ENST00000574776 AHDC1Q5TGY3 1603 aaPredicted RBP22.85■■□□□ 1.25
CTNS-209ENST00000574776 DCCP43146 1447 aa22.84■■□□□ 1.25
CTNS-209ENST00000574776 MEX3CQ5U5Q3 659 aaKnown RBP22.84■■□□□ 1.25
CTNS-209ENST00000574776 RPGRIP1LQ68CZ1 1315 aa22.82■■□□□ 1.24
CTNS-209ENST00000574776 MST1RQ04912 1400 aa22.82■■□□□ 1.24
CTNS-209ENST00000574776 LRP6O75581 1613 aa22.81■■□□□ 1.24
CTNS-209ENST00000574776 NUTM2BA6NNL0 878 aaPredicted RBP22.8■■□□□ 1.24
CTNS-209ENST00000574776 NUTM2EB1AL46 878 aaPredicted RBP22.8■■□□□ 1.24
CTNS-209ENST00000574776 NUTM2AQ8IVF1 878 aaPredicted RBP22.8■■□□□ 1.24
CTNS-209ENST00000574776 DDX17Q92841 729 aaKnown RBP22.79■■□□□ 1.24
CTNS-209ENST00000574776 ADGRL3Q9HAR2 1447 aa22.79■■□□□ 1.24
CTNS-209ENST00000574776 ASXL1Q8IXJ9 1541 aa22.78■■□□□ 1.24
CTNS-209ENST00000574776 SHPRHQ149N8 1683 aa22.77■■□□□ 1.24
CTNS-209ENST00000574776 ZNF772Q68DY9 489 aaPredicted RBP22.76■■□□□ 1.23
CTNS-209ENST00000574776 LRRC59Q96AG4 307 aaKnown RBP22.76■■□□□ 1.23
CTNS-209ENST00000574776 ROBO2Q9HCK4 1378 aa22.76■■□□□ 1.23
CTNS-209ENST00000574776 MPHOSPH9Q99550 1183 aa22.75■■□□□ 1.23
CTNS-209ENST00000574776 RGL3Q3MIN7 710 aa22.74■■□□□ 1.23
CTNS-209ENST00000574776 NALCNQ8IZF0 1738 aa22.74■■□□□ 1.23
CTNS-209ENST00000574776 SETD5Q9C0A6 1442 aa22.74■■□□□ 1.23
CTNS-209ENST00000574776 SETD1AO15047 1707 aaKnown RBP22.72■■□□□ 1.23
CTNS-209ENST00000574776 PPLO60437 1756 aa22.72■■□□□ 1.23
CTNS-209ENST00000574776 ORAI2Q96SN7 254 aa22.71■■□□□ 1.23
CTNS-209ENST00000574776 ADGRF5Q8IZF2 1346 aa22.71■■□□□ 1.23
CTNS-209ENST00000574776 PTCH1Q13635 1447 aa22.71■■□□□ 1.23
CTNS-209ENST00000574776 C1orf167Q5SNV9 1468 aa22.71■■□□□ 1.23
CTNS-209ENST00000574776 NHSL1Q5SYE7 1610 aa22.71■■□□□ 1.23
CTNS-209ENST00000574776 CCDC144AA2RUR9 1427 aa22.69■■□□□ 1.22
CTNS-209ENST00000574776 RXRBP28702 533 aa22.66■■□□□ 1.22
CTNS-209ENST00000574776 STK26Q9P289 416 aa22.66■■□□□ 1.22
CTNS-209ENST00000574776 PNPLA6Q8IY17 1366 aa22.65■■□□□ 1.22
CTNS-209ENST00000574776 AFF2P51816 1311 aa22.65■■□□□ 1.22
CTNS-209ENST00000574776 SPATA31E1Q6ZUB1 1445 aa22.65■■□□□ 1.22
CTNS-209ENST00000574776 PRAG1Q86YV5 1406 aa22.64■■□□□ 1.21
CTNS-209ENST00000574776 TMEM132EQ6IEE7 984 aa22.63■■□□□ 1.21
CTNS-209ENST00000574776 C8orf37Q96NL8 207 aa22.63■■□□□ 1.21
CTNS-209ENST00000574776 ANKRD30BQ9BXX2 1392 aa22.63■■□□□ 1.21
CTNS-209ENST00000574776 WAPLQ7Z5K2 1190 aa22.62■■□□□ 1.21
CTNS-209ENST00000574776 SOS2Q07890 1332 aaPredicted RBP22.61■■□□□ 1.21
CTNS-209ENST00000574776 ADAMTS2O95450 1211 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms