RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 NBPF1Q3BBV0 1214 aa39.62■■■■□ 3.93
CTDNEP1-210ENST00000574322 FBXO31Q5XUX0 539 aaPredicted RBP39.62■■■■□ 3.93
CTDNEP1-210ENST00000574322 PIK3C2BO00750 1634 aa39.62■■■■□ 3.93
CTDNEP1-210ENST00000574322 KIAA1210Q9ULL0 1709 aa39.61■■■■□ 3.93
CTDNEP1-210ENST00000574322 CENPBP07199 599 aaPredicted RBP39.58■■■■□ 3.93
CTDNEP1-210ENST00000574322 CFAP65Q6ZU64 1925 aaKnown RBP39.57■■■■□ 3.93
CTDNEP1-210ENST00000574322 ST20-MTHFSA0A0A6YYL1 179 aa39.57■■■■□ 3.92
CTDNEP1-210ENST00000574322 CCER2I3L3R5 266 aa39.57■■■■□ 3.92
CTDNEP1-210ENST00000574322 SYNMO15061 1565 aa39.56■■■■□ 3.92
CTDNEP1-210ENST00000574322 ERVK-7P63135 1459 aa39.54■■■■□ 3.92
CTDNEP1-210ENST00000574322 NRXN1Q9ULB1 1477 aa39.54■■■■□ 3.92
CTDNEP1-210ENST00000574322 PREX1Q8TCU6 1659 aa39.49■■■■□ 3.91
CTDNEP1-210ENST00000574322 SPATA31D1Q6ZQQ2 1576 aa39.48■■■■□ 3.91
CTDNEP1-210ENST00000574322 RPGRIP1LQ68CZ1 1315 aa39.47■■■■□ 3.91
CTDNEP1-210ENST00000574322 TNRQ92752 1358 aa39.47■■■■□ 3.91
CTDNEP1-210ENST00000574322 IQGAP1P46940 1657 aa39.47■■■■□ 3.91
CTDNEP1-210ENST00000574322 PPLO60437 1756 aa39.46■■■■□ 3.91
CTDNEP1-210ENST00000574322 YTHDC1Q96MU7 727 aaKnown RBP39.43■■■■□ 3.9
CTDNEP1-210ENST00000574322 SLC52A1Q9NWF4 448 aa39.43■■■■□ 3.9
CTDNEP1-210ENST00000574322 SCAF11Q99590 1463 aaKnown RBP39.39■■■■□ 3.9
CTDNEP1-210ENST00000574322 ADGRF5Q8IZF2 1346 aa39.38■■■■□ 3.89
CTDNEP1-210ENST00000574322 TESK2Q96S53 571 aa39.37■■■■□ 3.89
CTDNEP1-210ENST00000574322 CHGAP10645 457 aaKnown RBP39.32■■■■□ 3.89
CTDNEP1-210ENST00000574322 IDI1Q13907 227 aa39.32■■■■□ 3.89
CTDNEP1-210ENST00000574322 PIK3C2GO75747 1445 aa39.31■■■■□ 3.88
CTDNEP1-210ENST00000574322 SETBP1Q9Y6X0 1596 aa39.31■■■■□ 3.88
CTDNEP1-210ENST00000574322 SETD1BQ9UPS6 1966 aaKnown RBP39.3■■■■□ 3.88
CTDNEP1-210ENST00000574322 NLRP1Q9C000 1473 aa39.3■■■■□ 3.88
CTDNEP1-210ENST00000574322 NEXMIFQ5QGS0 1516 aa39.29■■■■□ 3.88
CTDNEP1-210ENST00000574322 MYO3AQ8NEV4 1616 aa39.28■■■■□ 3.88
CTDNEP1-210ENST00000574322 TMEM131LA2VDJ0 1609 aa39.27■■■■□ 3.88
CTDNEP1-210ENST00000574322 ZFYVE9O95405 1425 aa39.26■■■■□ 3.87
CTDNEP1-210ENST00000574322 CFAP70Q5T0N1 1121 aa39.26■■■■□ 3.87
CTDNEP1-210ENST00000574322 AEBP2Q6ZN18 517 aaPredicted RBP39.26■■■■□ 3.87
CTDNEP1-210ENST00000574322 PRKRIP1Q9H875 184 aaPredicted RBP39.25■■■■□ 3.87
CTDNEP1-210ENST00000574322 EIF3AQ14152 1382 aaKnown RBP39.24■■■■□ 3.87
CTDNEP1-210ENST00000574322 C14orf93Q9H972 538 aaKnown RBP39.21■■■■□ 3.87
CTDNEP1-210ENST00000574322 STAG3Q9UJ98 1225 aa39.21■■■■□ 3.87
CTDNEP1-210ENST00000574322 A2ML1A8K2U0 1454 aa39.2■■■■□ 3.87
CTDNEP1-210ENST00000574322 TMF1P82094 1093 aa39.2■■■■□ 3.87
CTDNEP1-210ENST00000574322 DISP3Q9P2K9 1392 aa39.2■■■■□ 3.87
CTDNEP1-210ENST00000574322 VGFO15240 615 aaPredicted RBP39.2■■■■□ 3.87
CTDNEP1-210ENST00000574322 POLR3GLQ9BT43 218 aa39.19■■■■□ 3.86
CTDNEP1-210ENST00000574322 CEP170BQ9Y4F5 1589 aaPredicted RBP39.19■■■■□ 3.86
CTDNEP1-210ENST00000574322 MYO5BQ9ULV0 1848 aa39.16■■■■□ 3.86
CTDNEP1-210ENST00000574322 ADGRB1O14514 1584 aa39.14■■■■□ 3.86
CTDNEP1-210ENST00000574322 SLC24A1O60721 1099 aa39.14■■■■□ 3.86
CTDNEP1-210ENST00000574322 ZNF142P52746 1687 aaPredicted RBP39.13■■■■□ 3.85
CTDNEP1-210ENST00000574322 LMTK3Q96Q04 1460 aa39.1■■■■□ 3.85
CTDNEP1-210ENST00000574322 THEMISQ8N1K5 641 aaPredicted RBP39.09■■■■□ 3.85
CTDNEP1-210ENST00000574322 UBR1Q8IWV7 1749 aa39.06■■■■□ 3.84
CTDNEP1-210ENST00000574322 SBNO2Q9Y2G9 1366 aa39.06■■■■□ 3.84
CTDNEP1-210ENST00000574322 CDCA8Q53HL2 280 aa39.06■■■■□ 3.84
CTDNEP1-210ENST00000574322 KDM5AP29375 1690 aaKnown RBP39.03■■■■□ 3.84
CTDNEP1-210ENST00000574322 KTN1Q86UP2 1357 aaKnown RBP39.03■■■■□ 3.84
CTDNEP1-210ENST00000574322 HSPA2P54652 639 aa39■■■■□ 3.83
CTDNEP1-210ENST00000574322 PER1O15534 1290 aaPredicted RBP38.96■■■■□ 3.83
CTDNEP1-210ENST00000574322 TMEM2Q9UHN6 1383 aa38.96■■■■□ 3.83
CTDNEP1-210ENST00000574322 CENPJQ9HC77 1338 aaPredicted RBP38.9■■■■□ 3.82
CTDNEP1-210ENST00000574322 SLIT1O75093 1534 aa38.9■■■■□ 3.82
CTDNEP1-210ENST00000574322 NUTM2DQ5VT03 806 aaPredicted RBP38.9■■■■□ 3.82
CTDNEP1-210ENST00000574322 RIMS2Q9UQ26 1411 aa38.89■■■■□ 3.82
CTDNEP1-210ENST00000574322 ARHGAP23Q9P227 1491 aa38.89■■■■□ 3.82
CTDNEP1-210ENST00000574322 RALBP1Q15311 655 aa38.88■■■■□ 3.81
CTDNEP1-210ENST00000574322 CCDC184Q52MB2 194 aa38.88■■■■□ 3.81
CTDNEP1-210ENST00000574322 HDGFP51858 240 aaKnown RBP38.87■■■■□ 3.81
CTDNEP1-210ENST00000574322 EID1Q9Y6B2 187 aa38.87■■■■□ 3.81
CTDNEP1-210ENST00000574322 TMEM132EQ6IEE7 984 aa38.86■■■■□ 3.81
CTDNEP1-210ENST00000574322 ASXL1Q8IXJ9 1541 aa38.86■■■■□ 3.81
CTDNEP1-210ENST00000574322 TXNDC2Q86VQ3 553 aa38.86■■■■□ 3.81
CTDNEP1-210ENST00000574322 ANKLE2Q86XL3 938 aa38.86■■■■□ 3.81
CTDNEP1-210ENST00000574322 PANK3Q9H999 370 aa38.86■■■■□ 3.81
CTDNEP1-210ENST00000574322 MYOM1P52179 1685 aa38.85■■■■□ 3.81
CTDNEP1-210ENST00000574322 ARHGEF28Q8N1W1 1705 aaKnown RBP38.85■■■■□ 3.81
CTDNEP1-210ENST00000574322 QRICH2Q9H0J4 1663 aa38.84■■■■□ 3.81
CTDNEP1-210ENST00000574322 ABCF1Q8NE71 845 aaKnown RBP eCLIP38.84■■■■□ 3.81
CTDNEP1-210ENST00000574322 SCAF1Q9H7N4 1312 aaKnown RBP38.84■■■■□ 3.81
CTDNEP1-210ENST00000574322 MRS2Q9HD23 443 aa38.83■■■■□ 3.81
CTDNEP1-210ENST00000574322 TRAK1Q9UPV9 953 aa38.83■■■■□ 3.81
CTDNEP1-210ENST00000574322 LTKP29376 864 aa38.83■■■■□ 3.81
CTDNEP1-210ENST00000574322 PARD3Q8TEW0 1356 aa38.81■■■■□ 3.8
CTDNEP1-210ENST00000574322 ALKQ9UM73 1620 aa38.81■■■■□ 3.8
CTDNEP1-210ENST00000574322 NCKAP5LQ9HCH0 1330 aa38.79■■■■□ 3.8
CTDNEP1-210ENST00000574322 MYBBP1AQ9BQG0 1328 aaKnown RBP38.76■■■■□ 3.79
CTDNEP1-210ENST00000574322 PUS7Q96PZ0 661 aaKnown RBP38.73■■■■□ 3.79
CTDNEP1-210ENST00000574322 BRD4O60885 1362 aaPredicted RBP38.71■■■■□ 3.79
CTDNEP1-210ENST00000574322 SETD1AO15047 1707 aaKnown RBP38.7■■■■□ 3.79
CTDNEP1-210ENST00000574322 SENP3Q9H4L4 574 aaPredicted RBP38.7■■■■□ 3.79
CTDNEP1-210ENST00000574322 YTHDC2Q9H6S0 1430 aaKnown RBP38.7■■■■□ 3.79
CTDNEP1-210ENST00000574322 BCANQ96GW7 911 aa38.69■■■■□ 3.78
CTDNEP1-210ENST00000574322 GTF3C3Q9Y5Q9 886 aa38.67■■■■□ 3.78
CTDNEP1-210ENST00000574322 NPC1L1Q9UHC9 1359 aa38.67■■■■□ 3.78
CTDNEP1-210ENST00000574322 PLEKHG1Q9ULL1 1385 aa38.67■■■■□ 3.78
CTDNEP1-210ENST00000574322 NPHP4O75161 1426 aaPredicted RBP38.65■■■■□ 3.78
CTDNEP1-210ENST00000574322 MED14O60244 1454 aa38.65■■■■□ 3.78
CTDNEP1-210ENST00000574322 NRXN3Q9Y4C0 1643 aa38.65■■■■□ 3.78
CTDNEP1-210ENST00000574322 STRCQ7RTU9 1775 aa38.65■■■■□ 3.78
CTDNEP1-210ENST00000574322 KNSTRNQ9Y448 316 aa38.63■■■■□ 3.77
CTDNEP1-210ENST00000574322 DLC1Q96QB1 1528 aa38.62■■■■□ 3.77
CTDNEP1-210ENST00000574322 CNGB1Q14028 1251 aaPredicted RBP38.6■■■■□ 3.77
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms