RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 NLRP7Q8WX94 980 aa11.38□□□□□ -0.59
CDC27-216ENST00000574304 RNF40O75150 1001 aa11.37□□□□□ -0.59
CDC27-216ENST00000574304 SLC24A3Q9HC58 644 aa11.37□□□□□ -0.59
CDC27-216ENST00000574304 HCSTQ9UBK5 93 aa11.37□□□□□ -0.59
CDC27-216ENST00000574304 HPS5Q9UPZ3 1129 aa11.37□□□□□ -0.59
CDC27-216ENST00000574304 SLC4A3P48751 1232 aa11.36□□□□□ -0.59
CDC27-216ENST00000574304 SLF2Q8IX21 1173 aa11.36□□□□□ -0.59
CDC27-216ENST00000574304 AK7Q96M32 723 aa11.36□□□□□ -0.59
CDC27-216ENST00000574304 TSR3Q9UJK0 312 aaKnown RBP11.36□□□□□ -0.59
CDC27-216ENST00000574304 TPRNQ4KMQ1 711 aa11.34□□□□□ -0.59
CDC27-216ENST00000574304 PPP4CP60510 307 aa11.33□□□□□ -0.6
CDC27-216ENST00000574304 WBP1LQ9NX94 342 aa11.33□□□□□ -0.6
CDC27-216ENST00000574304 DAXXQ9UER7 740 aaPredicted RBP11.33□□□□□ -0.6
CDC27-216ENST00000574304 MDM2Q00987 491 aaPredicted RBP11.32□□□□□ -0.6
CDC27-216ENST00000574304 TRIM66O15016 1216 aa11.31□□□□□ -0.6
CDC27-216ENST00000574304 NECTIN2Q92692 538 aa11.3□□□□□ -0.6
CDC27-216ENST00000574304 CLCN1P35523 988 aa11.29□□□□□ -0.6
CDC27-216ENST00000574304 AMHR2Q16671 573 aa11.29□□□□□ -0.6
CDC27-216ENST00000574304 NYAP1Q6ZVC0 841 aa11.29□□□□□ -0.6
CDC27-216ENST00000574304 GPCPD1Q9NPB8 672 aa11.28□□□□□ -0.6
CDC27-216ENST00000574304 DDX11L8A8MPP1 907 aa11.27□□□□□ -0.61
CDC27-216ENST00000574304 SLC10A3P09131 477 aa11.27□□□□□ -0.61
CDC27-216ENST00000574304 TTLL12Q14166 644 aaPredicted RBP11.26□□□□□ -0.61
CDC27-216ENST00000574304 RSPH4AQ5TD94 716 aa11.26□□□□□ -0.61
CDC27-216ENST00000574304 SULF1Q8IWU6 871 aa11.26□□□□□ -0.61
CDC27-216ENST00000574304 TMUB1Q9BVT8 246 aa11.26□□□□□ -0.61
CDC27-216ENST00000574304 RDH13Q8NBN7 331 aa11.25□□□□□ -0.61
CDC27-216ENST00000574304 REPIN1Q9BWE0 567 aaKnown RBP11.24□□□□□ -0.61
CDC27-216ENST00000574304 CFHP08603 1231 aa11.23□□□□□ -0.61
CDC27-216ENST00000574304 APLP1P51693 650 aa11.23□□□□□ -0.61
CDC27-216ENST00000574304 PDE4DQ08499 809 aa11.23□□□□□ -0.61
CDC27-216ENST00000574304 PARP9Q8IXQ6 854 aa11.22□□□□□ -0.61
CDC27-216ENST00000574304 PRR14Q9BWN1 585 aa11.22□□□□□ -0.61
CDC27-216ENST00000574304 KMT5BQ4FZB7 885 aa11.21□□□□□ -0.61
CDC27-216ENST00000574304 FAM217BQ9NTX9 383 aaPredicted RBP11.21□□□□□ -0.61
CDC27-216ENST00000574304 PRKCSHP14314 528 aaPredicted RBP11.2□□□□□ -0.62
CDC27-216ENST00000574304 GIGYF2Q6Y7W6 1299 aaKnown RBP11.2□□□□□ -0.62
CDC27-216ENST00000574304 CD46P15529 392 aa11.19□□□□□ -0.62
CDC27-216ENST00000574304 ACTN4O43707 911 aaKnown RBP11.18□□□□□ -0.62
CDC27-216ENST00000574304 SSTR3P32745 418 aaPredicted RBP11.18□□□□□ -0.62
CDC27-216ENST00000574304 GCGRP47871 477 aa11.17□□□□□ -0.62
CDC27-216ENST00000574304 PCDHB3Q9Y5E6 796 aa11.14□□□□□ -0.63
CDC27-216ENST00000574304 MTRQ99707 1265 aa11.13□□□□□ -0.63
CDC27-216ENST00000574304 ITGBL1O95965 494 aaPredicted RBP11.12□□□□□ -0.63
CDC27-216ENST00000574304 MS4A1P11836 297 aa11.12□□□□□ -0.63
CDC27-216ENST00000574304 PLA2G2EQ9NZK7 142 aa11.12□□□□□ -0.63
CDC27-216ENST00000574304 COPS2P61201 443 aa11.11□□□□□ -0.63
CDC27-216ENST00000574304 FUT2Q10981 343 aa11.11□□□□□ -0.63
CDC27-216ENST00000574304 TJAP1Q5JTD0 557 aa11.11□□□□□ -0.63
CDC27-216ENST00000574304 KDM4AO75164 1064 aa11.1□□□□□ -0.63
CDC27-216ENST00000574304 BLOC1S3Q6QNY0 202 aa11.1□□□□□ -0.63
CDC27-216ENST00000574304 BEGAINQ9BUH8 593 aa11.1□□□□□ -0.63
CDC27-216ENST00000574304 IL21Q9HBE4 155 aa11.1□□□□□ -0.63
CDC27-216ENST00000574304 GPBP1L1Q9HC44 474 aaPredicted RBP11.1□□□□□ -0.63
CDC27-216ENST00000574304 KCNC4Q03721 635 aa11.09□□□□□ -0.63
CDC27-216ENST00000574304 ATP6V1AP38606 617 aa11.08□□□□□ -0.64
CDC27-216ENST00000574304 PUS10Q3MIT2 529 aaKnown RBP11.08□□□□□ -0.64
CDC27-216ENST00000574304 NUTM1Q86Y26 1132 aa11.08□□□□□ -0.64
CDC27-216ENST00000574304 KDM4CQ9H3R0 1056 aa11.08□□□□□ -0.64
CDC27-216ENST00000574304 USP46P62068 366 aa11.07□□□□□ -0.64
CDC27-216ENST00000574304 NR1I2O75469 434 aa11.06□□□□□ -0.64
CDC27-216ENST00000574304 NEUROD2Q15784 382 aa11.06□□□□□ -0.64
CDC27-216ENST00000574304 GRIPAP1Q4V328 841 aa11.06□□□□□ -0.64
CDC27-216ENST00000574304 ZNF516Q92618 1163 aa11.06□□□□□ -0.64
CDC27-216ENST00000574304 MORN1Q5T089 497 aa11.05□□□□□ -0.64
CDC27-216ENST00000574304 ZPR1O75312 459 aa11.04□□□□□ -0.64
CDC27-216ENST00000574304 IFFO2Q5TF58 517 aa11.04□□□□□ -0.64
CDC27-216ENST00000574304 SPIRE2Q8WWL2 714 aa11.04□□□□□ -0.64
CDC27-216ENST00000574304 HOXA2O43364 376 aa11.03□□□□□ -0.64
CDC27-216ENST00000574304 BRPF1P55201 1214 aaPredicted RBP11.03□□□□□ -0.64
CDC27-216ENST00000574304 SCUBE3Q8IX30 993 aa11.03□□□□□ -0.64
CDC27-216ENST00000574304 SLC27A5Q9Y2P5 690 aa11.02□□□□□ -0.65
CDC27-216ENST00000574304 HLA-CQ95604 372 aa11.01□□□□□ -0.65
CDC27-216ENST00000574304 TBC1D2Q9BYX2 928 aa11.01□□□□□ -0.65
CDC27-216ENST00000574304 DIXDC1Q155Q3 683 aa11□□□□□ -0.65
CDC27-216ENST00000574304 FAM117AQ9C073 453 aa11□□□□□ -0.65
CDC27-216ENST00000574304 NKX2-3Q8TAU0 364 aa10.99□□□□□ -0.65
CDC27-216ENST00000574304 TLL1O43897 1013 aa10.98□□□□□ -0.65
CDC27-216ENST00000574304 DDRGK1Q96HY6 314 aa10.98□□□□□ -0.65
CDC27-216ENST00000574304 MOXD2PA6NHM9 499 aa10.97□□□□□ -0.65
CDC27-216ENST00000574304 NDUFV2P19404 249 aa10.97□□□□□ -0.65
CDC27-216ENST00000574304 GUCA2AQ02747 115 aa10.97□□□□□ -0.65
CDC27-216ENST00000574304 FDX1P10109 184 aa10.96□□□□□ -0.65
CDC27-216ENST00000574304 Q3C1V9 767 aa10.96□□□□□ -0.65
CDC27-216ENST00000574304 THAP11Q96EK4 314 aa10.96□□□□□ -0.65
CDC27-216ENST00000574304 FMNL1O95466 1100 aaPredicted RBP10.95□□□□□ -0.66
CDC27-216ENST00000574304 SPSB2Q99619 263 aa10.95□□□□□ -0.66
CDC27-216ENST00000574304 SALL2Q9Y467 1007 aaPredicted RBP10.95□□□□□ -0.66
CDC27-216ENST00000574304 A0A0G2JS52 829 aa10.94□□□□□ -0.66
CDC27-216ENST00000574304 ADH1BP00325 375 aa10.94□□□□□ -0.66
CDC27-216ENST00000574304 MYSM1Q5VVJ2 828 aa10.94□□□□□ -0.66
CDC27-216ENST00000574304 BRICD5Q6PL45 260 aa10.94□□□□□ -0.66
CDC27-216ENST00000574304 RNF19BQ6ZMZ0 732 aa10.94□□□□□ -0.66
CDC27-216ENST00000574304 PLEKHG3A1L390 1219 aa10.93□□□□□ -0.66
CDC27-216ENST00000574304 RSBN1LQ6PCB5 846 aaPredicted RBP10.93□□□□□ -0.66
CDC27-216ENST00000574304 RSPH6AQ9H0K4 717 aa10.93□□□□□ -0.66
CDC27-216ENST00000574304 SPTLC1O15269 473 aa10.92□□□□□ -0.66
CDC27-216ENST00000574304 RIC3Q7Z5B4 369 aa10.92□□□□□ -0.66
CDC27-216ENST00000574304 PCDHGC3Q9UN70 934 aa10.92□□□□□ -0.66
CDC27-216ENST00000574304 GJA5P36382 358 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms