RNA–Protein interactions for RNA: ENST00000573603.1

POLR2A-202, Transcript of RNA polymerase II subunit A, humanhuman

TSL 2

Gene POLR2A, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-202ENST00000573603 TMEM131LA2VDJ0 1609 aa19.08■□□□□ 0.65
POLR2A-202ENST00000573603 BCANQ96GW7 911 aa19.08■□□□□ 0.64
POLR2A-202ENST00000573603 IQGAP3Q86VI3 1631 aa19.07■□□□□ 0.64
POLR2A-202ENST00000573603 NKTRP30414 1462 aaKnown RBP19.06■□□□□ 0.64
POLR2A-202ENST00000573603 RBM33Q96EV2 1170 aaKnown RBP19.06■□□□□ 0.64
POLR2A-202ENST00000573603 ZFYVE9O95405 1425 aa19.06■□□□□ 0.64
POLR2A-202ENST00000573603 KCNA6P17658 529 aa19.05■□□□□ 0.64
POLR2A-202ENST00000573603 RIMS2Q9UQ26 1411 aa19.05■□□□□ 0.64
POLR2A-202ENST00000573603 ITGAEP38570 1179 aa19.04■□□□□ 0.64
POLR2A-202ENST00000573603 PROSER2Q86WR7 435 aaPredicted RBP19.04■□□□□ 0.64
POLR2A-202ENST00000573603 ROBO1Q9Y6N7 1651 aa19.04■□□□□ 0.64
POLR2A-202ENST00000573603 ROCK1Q13464 1354 aa19.04■□□□□ 0.64
POLR2A-202ENST00000573603 PPP1R15AO75807 674 aaPredicted RBP19.03■□□□□ 0.64
POLR2A-202ENST00000573603 CHGAP10645 457 aaKnown RBP19.03■□□□□ 0.64
POLR2A-202ENST00000573603 PPARGC1BQ86YN6 1023 aaKnown RBP19.03■□□□□ 0.64
POLR2A-202ENST00000573603 PLEKHG1Q9ULL1 1385 aa19.02■□□□□ 0.64
POLR2A-202ENST00000573603 CHD2O14647 1828 aaKnown RBP19.01■□□□□ 0.63
POLR2A-202ENST00000573603 FAM135BQ49AJ0 1406 aa19■□□□□ 0.63
POLR2A-202ENST00000573603 NUP155O75694 1391 aa18.97■□□□□ 0.63
POLR2A-202ENST00000573603 MSH6P52701 1360 aa18.97■□□□□ 0.63
POLR2A-202ENST00000573603 NUTM2DQ5VT03 806 aaPredicted RBP18.97■□□□□ 0.63
POLR2A-202ENST00000573603 SPHKAPQ2M3C7 1700 aa18.95■□□□□ 0.62
POLR2A-202ENST00000573603 HDGFP51858 240 aaKnown RBP18.95■□□□□ 0.62
POLR2A-202ENST00000573603 DIP2AQ14689 1571 aa18.94■□□□□ 0.62
POLR2A-202ENST00000573603 PHLPP1O60346 1717 aa18.94■□□□□ 0.62
POLR2A-202ENST00000573603 ADAMTS13Q76LX8 1427 aa18.93■□□□□ 0.62
POLR2A-202ENST00000573603 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.93■□□□□ 0.62
POLR2A-202ENST00000573603 TBX22Q9Y458 520 aa18.9■□□□□ 0.62
POLR2A-202ENST00000573603 TRPM2O94759 1503 aa18.9■□□□□ 0.62
POLR2A-202ENST00000573603 C14orf37Q86TY3 774 aa18.89■□□□□ 0.61
POLR2A-202ENST00000573603 SLAIN2Q9P270 581 aa18.88■□□□□ 0.61
POLR2A-202ENST00000573603 RGS17Q9UGC6 210 aaPredicted RBP18.88■□□□□ 0.61
POLR2A-202ENST00000573603 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.88■□□□□ 0.61
POLR2A-202ENST00000573603 NRXN3Q9Y4C0 1643 aa18.86■□□□□ 0.61
POLR2A-202ENST00000573603 COL16A1Q07092 1604 aaPredicted RBP18.85■□□□□ 0.61
POLR2A-202ENST00000573603 PIK3R4Q99570 1358 aa18.85■□□□□ 0.61
POLR2A-202ENST00000573603 CLTCL1P53675 1640 aa18.85■□□□□ 0.61
POLR2A-202ENST00000573603 PTPRUQ92729 1446 aa18.83■□□□□ 0.61
POLR2A-202ENST00000573603 NCOA3Q9Y6Q9 1424 aa18.83■□□□□ 0.61
POLR2A-202ENST00000573603 XRN1Q8IZH2 1706 aaKnown RBP18.83■□□□□ 0.61
POLR2A-202ENST00000573603 SETBP1Q9Y6X0 1596 aa18.83■□□□□ 0.6
POLR2A-202ENST00000573603 RRBP1Q9P2E9 1410 aaKnown RBP18.83■□□□□ 0.6
POLR2A-202ENST00000573603 ZNF326Q5BKZ1 582 aaKnown RBP18.82■□□□□ 0.6
POLR2A-202ENST00000573603 JCADQ9P266 1359 aa18.81■□□□□ 0.6
POLR2A-202ENST00000573603 AMOTL2Q9Y2J4 779 aa18.8■□□□□ 0.6
POLR2A-202ENST00000573603 NAIPQ13075 1403 aa18.8■□□□□ 0.6
POLR2A-202ENST00000573603 KIF1BO60333 1816 aa18.79■□□□□ 0.6
POLR2A-202ENST00000573603 AHDC1Q5TGY3 1603 aaPredicted RBP18.79■□□□□ 0.6
POLR2A-202ENST00000573603 ATF3P18847 181 aa18.79■□□□□ 0.6
POLR2A-202ENST00000573603 NEXMIFQ5QGS0 1516 aa18.79■□□□□ 0.6
POLR2A-202ENST00000573603 POTEAQ6S8J7 498 aa18.78■□□□□ 0.6
POLR2A-202ENST00000573603 CADPS2Q86UW7 1296 aa18.78■□□□□ 0.6
POLR2A-202ENST00000573603 C19orf44Q9H6X5 657 aa18.77■□□□□ 0.6
POLR2A-202ENST00000573603 SETD1AO15047 1707 aaKnown RBP18.76■□□□□ 0.59
POLR2A-202ENST00000573603 SHPRHQ149N8 1683 aa18.76■□□□□ 0.59
POLR2A-202ENST00000573603 LRP6O75581 1613 aa18.75■□□□□ 0.59
POLR2A-202ENST00000573603 METP08581 1390 aa18.75■□□□□ 0.59
POLR2A-202ENST00000573603 NALCNQ8IZF0 1738 aa18.74■□□□□ 0.59
POLR2A-202ENST00000573603 DCCP43146 1447 aa18.74■□□□□ 0.59
POLR2A-202ENST00000573603 ASXL1Q8IXJ9 1541 aa18.73■□□□□ 0.59
POLR2A-202ENST00000573603 TRIM52Q96A61 297 aa18.72■□□□□ 0.59
POLR2A-202ENST00000573603 BRINP3Q76B58 766 aa18.71■□□□□ 0.59
POLR2A-202ENST00000573603 HFM1A2PYH4 1435 aa18.71■□□□□ 0.59
POLR2A-202ENST00000573603 MST1RQ04912 1400 aa18.7■□□□□ 0.58
POLR2A-202ENST00000573603 MEX3CQ5U5Q3 659 aaKnown RBP18.7■□□□□ 0.58
POLR2A-202ENST00000573603 NHSL1Q5SYE7 1610 aa18.7■□□□□ 0.58
POLR2A-202ENST00000573603 SPATA31A6Q5VVP1 1343 aa18.7■□□□□ 0.58
POLR2A-202ENST00000573603 ADGRL3Q9HAR2 1447 aa18.68■□□□□ 0.58
POLR2A-202ENST00000573603 PPLO60437 1756 aa18.66■□□□□ 0.58
POLR2A-202ENST00000573603 SLC4A1APQ9BWU0 796 aaKnown RBP18.65■□□□□ 0.58
POLR2A-202ENST00000573603 NUTM2BA6NNL0 878 aaPredicted RBP18.64■□□□□ 0.57
POLR2A-202ENST00000573603 NUTM2EB1AL46 878 aaPredicted RBP18.64■□□□□ 0.57
POLR2A-202ENST00000573603 NUTM2AQ8IVF1 878 aaPredicted RBP18.64■□□□□ 0.57
POLR2A-202ENST00000573603 PTCH1Q13635 1447 aa18.62■□□□□ 0.57
POLR2A-202ENST00000573603 SETD5Q9C0A6 1442 aa18.61■□□□□ 0.57
POLR2A-202ENST00000573603 VGFO15240 615 aaPredicted RBP18.61■□□□□ 0.57
POLR2A-202ENST00000573603 DDX17Q92841 729 aaKnown RBP18.61■□□□□ 0.57
POLR2A-202ENST00000573603 ROBO2Q9HCK4 1378 aa18.6■□□□□ 0.57
POLR2A-202ENST00000573603 FOXD1Q16676 465 aa18.6■□□□□ 0.57
POLR2A-202ENST00000573603 ZNF772Q68DY9 489 aaPredicted RBP18.59■□□□□ 0.57
POLR2A-202ENST00000573603 C1orf167Q5SNV9 1468 aa18.58■□□□□ 0.57
POLR2A-202ENST00000573603 RPGRIP1LQ68CZ1 1315 aa18.57■□□□□ 0.56
POLR2A-202ENST00000573603 PNPLA6Q8IY17 1366 aa18.56■□□□□ 0.56
POLR2A-202ENST00000573603 PRAG1Q86YV5 1406 aa18.56■□□□□ 0.56
POLR2A-202ENST00000573603 IFT172Q9UG01 1749 aa18.55■□□□□ 0.56
POLR2A-202ENST00000573603 LRRC59Q96AG4 307 aaKnown RBP18.55■□□□□ 0.56
POLR2A-202ENST00000573603 CCDC144AA2RUR9 1427 aa18.55■□□□□ 0.56
POLR2A-202ENST00000573603 AFF2P51816 1311 aa18.54■□□□□ 0.56
POLR2A-202ENST00000573603 LAMC1P11047 1609 aa18.54■□□□□ 0.56
POLR2A-202ENST00000573603 C8orf37Q96NL8 207 aa18.52■□□□□ 0.56
POLR2A-202ENST00000573603 CDC42BPGQ6DT37 1551 aa18.51■□□□□ 0.55
POLR2A-202ENST00000573603 ORAI2Q96SN7 254 aa18.51■□□□□ 0.55
POLR2A-202ENST00000573603 ADGRF5Q8IZF2 1346 aa18.5■□□□□ 0.55
POLR2A-202ENST00000573603 RXRBP28702 533 aa18.5■□□□□ 0.55
POLR2A-202ENST00000573603 RGL3Q3MIN7 710 aa18.5■□□□□ 0.55
POLR2A-202ENST00000573603 SPATA31E1Q6ZUB1 1445 aa18.49■□□□□ 0.55
POLR2A-202ENST00000573603 KNDC1Q76NI1 1749 aa18.49■□□□□ 0.55
POLR2A-202ENST00000573603 MPHOSPH9Q99550 1183 aa18.48■□□□□ 0.55
POLR2A-202ENST00000573603 CDK12Q9NYV4 1490 aaPredicted RBP18.47■□□□□ 0.55
POLR2A-202ENST00000573603 ADAMTS2O95450 1211 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms