RNA–Protein interactions for RNA: ENST00000572988.1

NCBP3-202, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 3

Gene NCBP3, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-202ENST00000572988 RBM27Q9P2N5 1060 aaKnown RBP8.75□□□□□ -1.01
NCBP3-202ENST00000572988 SEPT9Q9UHD8 586 aaPredicted RBP8.75□□□□□ -1.01
NCBP3-202ENST00000572988 PNMA3Q9UL41 463 aa8.75□□□□□ -1.01
NCBP3-202ENST00000572988 NBPF26B4DH59 902 aa8.74□□□□□ -1.01
NCBP3-202ENST00000572988 SMAPO00193 183 aa8.74□□□□□ -1.01
NCBP3-202ENST00000572988 FAM198AQ9UFP1 575 aa8.74□□□□□ -1.01
NCBP3-202ENST00000572988 TATDN2Q93075 761 aa8.73□□□□□ -1.01
NCBP3-202ENST00000572988 URB2Q14146 1524 aaKnown RBP8.73□□□□□ -1.01
NCBP3-202ENST00000572988 GNPATO15228 680 aa8.72□□□□□ -1.01
NCBP3-202ENST00000572988 NUDT18Q6ZVK8 323 aa8.72□□□□□ -1.01
NCBP3-202ENST00000572988 LAPTM4BQ86VI4 370 aa8.71□□□□□ -1.02
NCBP3-202ENST00000572988 TTC13Q8NBP0 860 aa8.71□□□□□ -1.02
NCBP3-202ENST00000572988 GPR37O15354 613 aa8.7□□□□□ -1.02
NCBP3-202ENST00000572988 FECHP22830 423 aa8.7□□□□□ -1.02
NCBP3-202ENST00000572988 C3orf80F5H4A9 247 aa8.69□□□□□ -1.02
NCBP3-202ENST00000572988 FAM98CQ17RN3 349 aaKnown RBP8.69□□□□□ -1.02
NCBP3-202ENST00000572988 FAM161AQ3B820 660 aa8.69□□□□□ -1.02
NCBP3-202ENST00000572988 ZFRQ96KR1 1074 aaKnown RBP8.69□□□□□ -1.02
NCBP3-202ENST00000572988 HDGFP51858 240 aaKnown RBP8.68□□□□□ -1.02
NCBP3-202ENST00000572988 ANKK1Q8NFD2 765 aa8.68□□□□□ -1.02
NCBP3-202ENST00000572988 RBM46Q8TBY0 533 aaKnown RBP8.68□□□□□ -1.02
NCBP3-202ENST00000572988 IFFO2Q5TF58 517 aa8.67□□□□□ -1.02
NCBP3-202ENST00000572988 KRI1Q8N9T8 703 aaKnown RBP8.67□□□□□ -1.02
NCBP3-202ENST00000572988 ADGRG1Q9Y653 693 aa8.67□□□□□ -1.02
NCBP3-202ENST00000572988 ZC3H15Q8WU90 426 aaKnown RBP8.66□□□□□ -1.02
NCBP3-202ENST00000572988 ZNF608Q9ULD9 1512 aaPredicted RBP8.65□□□□□ -1.02
NCBP3-202ENST00000572988 OATP04181 439 aa8.65□□□□□ -1.02
NCBP3-202ENST00000572988 EYA1Q99502 592 aa8.65□□□□□ -1.02
NCBP3-202ENST00000572988 A0A0G2JS52 829 aa8.64□□□□□ -1.03
NCBP3-202ENST00000572988 LRCH3Q96II8 777 aa8.64□□□□□ -1.03
NCBP3-202ENST00000572988 TOPBP1Q92547 1522 aa8.64□□□□□ -1.03
NCBP3-202ENST00000572988 RNF40O75150 1001 aa8.63□□□□□ -1.03
NCBP3-202ENST00000572988 BCAMP50895 628 aa8.63□□□□□ -1.03
NCBP3-202ENST00000572988 SAMD7Q7Z3H4 446 aa8.63□□□□□ -1.03
NCBP3-202ENST00000572988 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.63□□□□□ -1.03
NCBP3-202ENST00000572988 MAP2K5Q13163 448 aa8.62□□□□□ -1.03
NCBP3-202ENST00000572988 AQRO60306 1485 aaKnown RBP eCLIP8.62□□□□□ -1.03
NCBP3-202ENST00000572988 IFT140Q96RY7 1462 aa8.62□□□□□ -1.03
NCBP3-202ENST00000572988 MINK1Q8N4C8 1332 aaPredicted RBP8.61□□□□□ -1.03
NCBP3-202ENST00000572988 RCCD1A6NED2 376 aa8.61□□□□□ -1.03
NCBP3-202ENST00000572988 SOWAHBA6NEL2 793 aa8.61□□□□□ -1.03
NCBP3-202ENST00000572988 ZMYND10O75800 440 aa8.61□□□□□ -1.03
NCBP3-202ENST00000572988 RGS20O76081 388 aa8.61□□□□□ -1.03
NCBP3-202ENST00000572988 DNAJB2P25686 324 aa8.61□□□□□ -1.03
NCBP3-202ENST00000572988 SLC4A3P48751 1232 aa8.61□□□□□ -1.03
NCBP3-202ENST00000572988 PXYLP1Q8TE99 480 aa8.61□□□□□ -1.03
NCBP3-202ENST00000572988 ABCC8Q09428 1581 aa8.61□□□□□ -1.03
NCBP3-202ENST00000572988 IRF6O14896 467 aa8.6□□□□□ -1.03
NCBP3-202ENST00000572988 SWT1Q5T5J6 900 aaKnown RBP8.6□□□□□ -1.03
NCBP3-202ENST00000572988 BARGINQ6ZT62 677 aa8.6□□□□□ -1.03
NCBP3-202ENST00000572988 IRX2Q9BZI1 471 aaPredicted RBP8.6□□□□□ -1.03
NCBP3-202ENST00000572988 HPS5Q9UPZ3 1129 aa8.6□□□□□ -1.03
NCBP3-202ENST00000572988 TDRD9Q8NDG6 1382 aaKnown RBP8.6□□□□□ -1.03
NCBP3-202ENST00000572988 CYB5RLQ6IPT4 315 aa8.59□□□□□ -1.03
NCBP3-202ENST00000572988 METTL3Q86U44 580 aaKnown RBP8.59□□□□□ -1.03
NCBP3-202ENST00000572988 SOGA1O94964 1423 aa8.59□□□□□ -1.03
NCBP3-202ENST00000572988 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.58□□□□□ -1.04
NCBP3-202ENST00000572988 PPP4CP60510 307 aa8.58□□□□□ -1.04
NCBP3-202ENST00000572988 RAD54L2Q9Y4B4 1467 aa8.57□□□□□ -1.04
NCBP3-202ENST00000572988 SLF2Q8IX21 1173 aa8.57□□□□□ -1.04
NCBP3-202ENST00000572988 NLRP7Q8WX94 980 aa8.57□□□□□ -1.04
NCBP3-202ENST00000572988 CCDC102AQ96A19 550 aa8.57□□□□□ -1.04
NCBP3-202ENST00000572988 WBP1LQ9NX94 342 aa8.57□□□□□ -1.04
NCBP3-202ENST00000572988 TSR3Q9UJK0 312 aaKnown RBP8.57□□□□□ -1.04
NCBP3-202ENST00000572988 ITGBL1O95965 494 aaPredicted RBP8.56□□□□□ -1.04
NCBP3-202ENST00000572988 TMEM134Q9H6X4 195 aa8.56□□□□□ -1.04
NCBP3-202ENST00000572988 POLA1P09884 1462 aaPredicted RBP8.55□□□□□ -1.04
NCBP3-202ENST00000572988 DNMBPQ6XZF7 1577 aa8.54□□□□□ -1.04
NCBP3-202ENST00000572988 PHOX2BQ99453 314 aa8.54□□□□□ -1.04
NCBP3-202ENST00000572988 CHMP7Q8WUX9 453 aaPredicted RBP8.53□□□□□ -1.04
NCBP3-202ENST00000572988 SLC24A3Q9HC58 644 aa8.53□□□□□ -1.04
NCBP3-202ENST00000572988 RSPH4AQ5TD94 716 aa8.52□□□□□ -1.05
NCBP3-202ENST00000572988 NECTIN2Q92692 538 aa8.52□□□□□ -1.05
NCBP3-202ENST00000572988 DAXXQ9UER7 740 aaPredicted RBP8.52□□□□□ -1.05
NCBP3-202ENST00000572988 TARBP1Q13395 1621 aaKnown RBP8.51□□□□□ -1.05
NCBP3-202ENST00000572988 MDM2Q00987 491 aaPredicted RBP8.51□□□□□ -1.05
NCBP3-202ENST00000572988 AK7Q96M32 723 aa8.51□□□□□ -1.05
NCBP3-202ENST00000572988 DDX11L8A8MPP1 907 aa8.5□□□□□ -1.05
NCBP3-202ENST00000572988 PRDM2Q13029 1718 aa8.5□□□□□ -1.05
NCBP3-202ENST00000572988 NYAP1Q6ZVC0 841 aa8.5□□□□□ -1.05
NCBP3-202ENST00000572988 RDH13Q8NBN7 331 aa8.5□□□□□ -1.05
NCBP3-202ENST00000572988 FGD5Q6ZNL6 1462 aa8.5□□□□□ -1.05
NCBP3-202ENST00000572988 KCNC4Q03721 635 aa8.49□□□□□ -1.05
NCBP3-202ENST00000572988 ARHGEF11O15085 1522 aa8.49□□□□□ -1.05
NCBP3-202ENST00000572988 CUX1P39880 1505 aa8.49□□□□□ -1.05
NCBP3-202ENST00000572988 EIF4G3O43432 1585 aaKnown RBP8.48□□□□□ -1.05
NCBP3-202ENST00000572988 TPRNQ4KMQ1 711 aa8.48□□□□□ -1.05
NCBP3-202ENST00000572988 SULF1Q8IWU6 871 aa8.48□□□□□ -1.05
NCBP3-202ENST00000572988 CLCN1P35523 988 aa8.47□□□□□ -1.05
NCBP3-202ENST00000572988 TTLL12Q14166 644 aaPredicted RBP8.47□□□□□ -1.05
NCBP3-202ENST00000572988 KMT5BQ4FZB7 885 aa8.47□□□□□ -1.05
NCBP3-202ENST00000572988 RIMBP3CA6NJZ7 1639 aa8.47□□□□□ -1.05
NCBP3-202ENST00000572988 RIMBP3BA6NNM3 1639 aa8.47□□□□□ -1.05
NCBP3-202ENST00000572988 RIMBP3Q9UFD9 1639 aa8.47□□□□□ -1.05
NCBP3-202ENST00000572988 TRIM66O15016 1216 aa8.46□□□□□ -1.06
NCBP3-202ENST00000572988 SLC10A3P09131 477 aa8.46□□□□□ -1.06
NCBP3-202ENST00000572988 PRR14Q9BWN1 585 aa8.46□□□□□ -1.06
NCBP3-202ENST00000572988 GPCPD1Q9NPB8 672 aa8.46□□□□□ -1.06
NCBP3-202ENST00000572988 CFHP08603 1231 aa8.45□□□□□ -1.06
NCBP3-202ENST00000572988 APLP1P51693 650 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms