RNA–Protein interactions for RNA: ENST00000572980.5

TVP23A-206, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-206ENST00000572980 RIMS2Q9UQ26 1411 aa33.83■■■■□ 3.01
TVP23A-206ENST00000572980 RPGRIP1LQ68CZ1 1315 aa33.82■■■■□ 3.01
TVP23A-206ENST00000572980 NEUROD1Q13562 356 aa33.82■■■■□ 3
TVP23A-206ENST00000572980 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.82■■■■□ 3
TVP23A-206ENST00000572980 ZFYVE9O95405 1425 aa33.79■■■■□ 3
TVP23A-206ENST00000572980 LTKP29376 864 aa33.78■■■■□ 3
TVP23A-206ENST00000572980 NCKAP5LQ9HCH0 1330 aa33.78■■■■□ 3
TVP23A-206ENST00000572980 SCAF11Q99590 1463 aaKnown RBP33.77■■■■□ 3
TVP23A-206ENST00000572980 PPP1R15AO75807 674 aaPredicted RBP33.77■■■■□ 3
TVP23A-206ENST00000572980 POLR1AO95602 1720 aaPredicted RBP33.74■■■□□ 2.99
TVP23A-206ENST00000572980 NEXMIFQ5QGS0 1516 aa33.74■■■□□ 2.99
TVP23A-206ENST00000572980 VGFO15240 615 aaPredicted RBP33.73■■■□□ 2.99
TVP23A-206ENST00000572980 NUTM2DQ5VT03 806 aaPredicted RBP33.73■■■□□ 2.99
TVP23A-206ENST00000572980 STRCQ7RTU9 1775 aa33.73■■■□□ 2.99
TVP23A-206ENST00000572980 DMRT2Q9Y5R5 561 aa33.7■■■□□ 2.99
TVP23A-206ENST00000572980 MED14O60244 1454 aa33.69■■■□□ 2.98
TVP23A-206ENST00000572980 PPLO60437 1756 aa33.69■■■□□ 2.98
TVP23A-206ENST00000572980 DCAF11Q8TEB1 546 aa33.67■■■□□ 2.98
TVP23A-206ENST00000572980 STAC3Q96MF2 364 aa33.67■■■□□ 2.98
TVP23A-206ENST00000572980 NPHP4O75161 1426 aaPredicted RBP33.67■■■□□ 2.98
TVP23A-206ENST00000572980 BCANQ96GW7 911 aa33.65■■■□□ 2.98
TVP23A-206ENST00000572980 PLEKHG1Q9ULL1 1385 aa33.65■■■□□ 2.98
TVP23A-206ENST00000572980 IFT172Q9UG01 1749 aa33.64■■■□□ 2.98
TVP23A-206ENST00000572980 TONSLQ96HA7 1378 aa33.62■■■□□ 2.97
TVP23A-206ENST00000572980 L3MBTL2Q969R5 705 aa33.62■■■□□ 2.97
TVP23A-206ENST00000572980 KDM2AQ9Y2K7 1162 aa33.61■■■□□ 2.97
TVP23A-206ENST00000572980 IQGAP1P46940 1657 aa33.6■■■□□ 2.97
TVP23A-206ENST00000572980 ADGRF5Q8IZF2 1346 aa33.59■■■□□ 2.97
TVP23A-206ENST00000572980 MYOM2P54296 1465 aa33.59■■■□□ 2.97
TVP23A-206ENST00000572980 SENP3Q9H4L4 574 aaPredicted RBP33.58■■■□□ 2.97
TVP23A-206ENST00000572980 TIMELESSQ9UNS1 1208 aa33.55■■■□□ 2.96
TVP23A-206ENST00000572980 SLC26A8Q96RN1 970 aa33.53■■■□□ 2.96
TVP23A-206ENST00000572980 SETBP1Q9Y6X0 1596 aa33.53■■■□□ 2.96
TVP23A-206ENST00000572980 TBX22Q9Y458 520 aa33.51■■■□□ 2.95
TVP23A-206ENST00000572980 NRXN1Q9ULB1 1477 aa33.5■■■□□ 2.95
TVP23A-206ENST00000572980 PIK3C2GO75747 1445 aa33.49■■■□□ 2.95
TVP23A-206ENST00000572980 ADAMTS13Q76LX8 1427 aa33.48■■■□□ 2.95
TVP23A-206ENST00000572980 DIP2AQ14689 1571 aa33.46■■■□□ 2.95
TVP23A-206ENST00000572980 NRXN3Q9Y4C0 1643 aa33.46■■■□□ 2.95
TVP23A-206ENST00000572980 ALKQ9UM73 1620 aa33.42■■■□□ 2.94
TVP23A-206ENST00000572980 C14orf93Q9H972 538 aaKnown RBP33.42■■■□□ 2.94
TVP23A-206ENST00000572980 PRAG1Q86YV5 1406 aa33.41■■■□□ 2.94
TVP23A-206ENST00000572980 CFAP70Q5T0N1 1121 aa33.39■■■□□ 2.94
TVP23A-206ENST00000572980 PIK3R4Q99570 1358 aa33.38■■■□□ 2.93
TVP23A-206ENST00000572980 LAMC1P11047 1609 aa33.37■■■□□ 2.93
TVP23A-206ENST00000572980 METP08581 1390 aa33.34■■■□□ 2.93
TVP23A-206ENST00000572980 SETD1AO15047 1707 aaKnown RBP33.33■■■□□ 2.93
TVP23A-206ENST00000572980 ZNF335Q9H4Z2 1342 aaPredicted RBP33.32■■■□□ 2.92
TVP23A-206ENST00000572980 KCNA6P17658 529 aa33.31■■■□□ 2.92
TVP23A-206ENST00000572980 NBPF8Q3BBV2 869 aa33.3■■■□□ 2.92
TVP23A-206ENST00000572980 KIAA1210Q9ULL0 1709 aa33.29■■■□□ 2.92
TVP23A-206ENST00000572980 TMEM132EQ6IEE7 984 aa33.29■■■□□ 2.92
TVP23A-206ENST00000572980 CHD2O14647 1828 aaKnown RBP33.28■■■□□ 2.92
TVP23A-206ENST00000572980 AMOTL2Q9Y2J4 779 aa33.27■■■□□ 2.92
TVP23A-206ENST00000572980 PTPRUQ92729 1446 aa33.25■■■□□ 2.91
TVP23A-206ENST00000572980 TRPM1Q7Z4N2 1603 aa33.23■■■□□ 2.91
TVP23A-206ENST00000572980 ASXL1Q8IXJ9 1541 aa33.22■■■□□ 2.91
TVP23A-206ENST00000572980 NBPF1Q3BBV0 1214 aa33.22■■■□□ 2.91
TVP23A-206ENST00000572980 NWD1Q149M9 1564 aa33.22■■■□□ 2.91
TVP23A-206ENST00000572980 ADGRB1O14514 1584 aa33.21■■■□□ 2.91
TVP23A-206ENST00000572980 YTHDC2Q9H6S0 1430 aaKnown RBP33.2■■■□□ 2.91
TVP23A-206ENST00000572980 LRPPRCP42704 1394 aaKnown RBP33.2■■■□□ 2.91
TVP23A-206ENST00000572980 STK26Q9P289 416 aa33.2■■■□□ 2.91
TVP23A-206ENST00000572980 STRCP1A6NGW2 1772 aa33.19■■■□□ 2.9
TVP23A-206ENST00000572980 ROCK2O75116 1388 aaKnown RBP33.19■■■□□ 2.9
TVP23A-206ENST00000572980 CPS1P31327 1500 aa33.18■■■□□ 2.9
TVP23A-206ENST00000572980 NKTRP30414 1462 aaKnown RBP33.18■■■□□ 2.9
TVP23A-206ENST00000572980 XRN1Q8IZH2 1706 aaKnown RBP33.17■■■□□ 2.9
TVP23A-206ENST00000572980 ABCC11Q96J66 1382 aa33.17■■■□□ 2.9
TVP23A-206ENST00000572980 LTBP4Q8N2S1 1624 aa33.16■■■□□ 2.9
TVP23A-206ENST00000572980 RALGAPBQ86X10 1494 aa33.16■■■□□ 2.9
TVP23A-206ENST00000572980 PROSER2Q86WR7 435 aaPredicted RBP33.15■■■□□ 2.9
TVP23A-206ENST00000572980 TECPR2O15040 1411 aa33.12■■■□□ 2.89
TVP23A-206ENST00000572980 TRAK1Q9UPV9 953 aa33.11■■■□□ 2.89
TVP23A-206ENST00000572980 PTCH1Q13635 1447 aa33.11■■■□□ 2.89
TVP23A-206ENST00000572980 GPRASP1Q5JY77 1395 aa33.1■■■□□ 2.89
TVP23A-206ENST00000572980 CARD11Q9BXL7 1154 aa33.1■■■□□ 2.89
TVP23A-206ENST00000572980 KNDC1Q76NI1 1749 aa33.09■■■□□ 2.89
TVP23A-206ENST00000572980 SIRT1Q96EB6 747 aa33.09■■■□□ 2.89
TVP23A-206ENST00000572980 LRRC7Q96NW7 1537 aa33.08■■■□□ 2.89
TVP23A-206ENST00000572980 ROBO2Q9HCK4 1378 aa33.08■■■□□ 2.89
TVP23A-206ENST00000572980 TMEM94Q12767 1356 aa33.05■■■□□ 2.88
TVP23A-206ENST00000572980 DLC1Q96QB1 1528 aa33.05■■■□□ 2.88
TVP23A-206ENST00000572980 FAM135BQ49AJ0 1406 aa33.04■■■□□ 2.88
TVP23A-206ENST00000572980 ZEB1P37275 1124 aaPredicted RBP33.04■■■□□ 2.88
TVP23A-206ENST00000572980 RBM33Q96EV2 1170 aaKnown RBP33.03■■■□□ 2.88
TVP23A-206ENST00000572980 NCOA3Q9Y6Q9 1424 aa33.02■■■□□ 2.88
TVP23A-206ENST00000572980 POGKQ9P215 609 aa33.02■■■□□ 2.88
TVP23A-206ENST00000572980 WAPLQ7Z5K2 1190 aa33.01■■■□□ 2.88
TVP23A-206ENST00000572980 PRAM1Q96QH2 718 aa33.01■■■□□ 2.88
TVP23A-206ENST00000572980 C14orf37Q86TY3 774 aa33■■■□□ 2.87
TVP23A-206ENST00000572980 CERKQ8TCT0 537 aa32.99■■■□□ 2.87
TVP23A-206ENST00000572980 EIF3AQ14152 1382 aaKnown RBP32.98■■■□□ 2.87
TVP23A-206ENST00000572980 ARHGEF28Q8N1W1 1705 aaKnown RBP32.97■■■□□ 2.87
TVP23A-206ENST00000572980 PLEKHH1Q9ULM0 1364 aa32.95■■■□□ 2.87
TVP23A-206ENST00000572980 XIRP1Q702N8 1843 aaKnown RBP32.94■■■□□ 2.86
TVP23A-206ENST00000572980 SAFB2Q14151 953 aaKnown RBP eCLIP32.94■■■□□ 2.86
TVP23A-206ENST00000572980 C19orf44Q9H6X5 657 aa32.93■■■□□ 2.86
TVP23A-206ENST00000572980 IQSEC2Q5JU85 1478 aa32.93■■■□□ 2.86
TVP23A-206ENST00000572980 MSH6P52701 1360 aa32.92■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms